RNA–Protein interactions for RNA: ENST00000586544.1

ILF3-205, Transcript of interleukin enhancer binding factor 3, humanhuman

TSL 1 (best)

Gene ILF3, Length 3,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-205ENST00000586544 NISCHQ9Y2I1 1504 aa19.24■□□□□ 0.67
ILF3-205ENST00000586544 DCAF8L2P0C7V8 631 aa18.18■□□□□ 0.5
ILF3-205ENST00000586544 SUPT5HO00267 1087 aaKnown RBP17.75■□□□□ 0.43
ILF3-205ENST00000586544 SHROOM4Q9ULL8 1493 aa17.61■□□□□ 0.41
ILF3-205ENST00000586544 PELP1Q8IZL8 1130 aaKnown RBP17.53■□□□□ 0.4
ILF3-205ENST00000586544 MYT1Q01538 1121 aa17.33■□□□□ 0.36
ILF3-205ENST00000586544 EHMT2Q96KQ7 1210 aa17.16■□□□□ 0.34
ILF3-205ENST00000586544 PCGF6Q9BYE7 350 aa16.78■□□□□ 0.28
ILF3-205ENST00000586544 FAM9AQ8IZU1 332 aaPredicted RBP16.71■□□□□ 0.27
ILF3-205ENST00000586544 TTBK1Q5TCY1 1321 aaPredicted RBP16.54■□□□□ 0.24
ILF3-205ENST00000586544 PPARGC1BQ86YN6 1023 aaKnown RBP16.27■□□□□ 0.2
ILF3-205ENST00000586544 LOC105371045A0A1W2PR82 267 aa16.25■□□□□ 0.19
ILF3-205ENST00000586544 ZCCHC6Q5VYS8 1495 aaKnown RBP16.22■□□□□ 0.19
ILF3-205ENST00000586544 TRIM41Q8WV44 630 aa16.21■□□□□ 0.19
ILF3-205ENST00000586544 CCDC180Q9P1Z9 1646 aa16.2■□□□□ 0.18
ILF3-205ENST00000586544 RANGAP1P46060 587 aaPredicted RBP16.18■□□□□ 0.18
ILF3-205ENST00000586544 CHIC1Q5VXU3 224 aa16.14■□□□□ 0.17
ILF3-205ENST00000586544 ERICH6Q7L0X2 663 aa16.13■□□□□ 0.17
ILF3-205ENST00000586544 PRKCSHP14314 528 aaPredicted RBP16.06■□□□□ 0.16
ILF3-205ENST00000586544 HRCP23327 699 aa16.03■□□□□ 0.16
ILF3-205ENST00000586544 CCER1Q8TC90 406 aaPredicted RBP16■□□□□ 0.15
ILF3-205ENST00000586544 APLP2Q06481 763 aa15.94■□□□□ 0.14
ILF3-205ENST00000586544 UBTFP17480 764 aaKnown RBP15.86■□□□□ 0.13
ILF3-205ENST00000586544 TRIM26Q12899 539 aaPredicted RBP15.84■□□□□ 0.13
ILF3-205ENST00000586544 BCL11AQ9H165 835 aa15.84■□□□□ 0.13
ILF3-205ENST00000586544 YTHDC1Q96MU7 727 aaKnown RBP15.8■□□□□ 0.12
ILF3-205ENST00000586544 SLC24A1O60721 1099 aa15.76■□□□□ 0.11
ILF3-205ENST00000586544 ZEB1P37275 1124 aaPredicted RBP15.76■□□□□ 0.11
ILF3-205ENST00000586544 SCAF1Q9H7N4 1312 aaKnown RBP15.68■□□□□ 0.1
ILF3-205ENST00000586544 CENPBP07199 599 aaPredicted RBP15.66■□□□□ 0.1
ILF3-205ENST00000586544 ATP1B4Q9UN42 357 aaPredicted RBP15.66■□□□□ 0.1
ILF3-205ENST00000586544 DCAF1Q9Y4B6 1507 aa15.65■□□□□ 0.1
ILF3-205ENST00000586544 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.65■□□□□ 0.1
ILF3-205ENST00000586544 MYO15BQ96JP2 1530 aa15.6■□□□□ 0.09
ILF3-205ENST00000586544 HNRNPUL2Q1KMD3 747 aaKnown RBP15.55■□□□□ 0.08
ILF3-205ENST00000586544 ITGAEP38570 1179 aa15.5■□□□□ 0.07
ILF3-205ENST00000586544 SCRIBQ14160 1630 aa15.41■□□□□ 0.06
ILF3-205ENST00000586544 ABCC9O60706 1549 aa15.37■□□□□ 0.05
ILF3-205ENST00000586544 PABPN1Q86U42 306 aaKnown RBP eCLIP15.32■□□□□ 0.047e-7■■■□□ 16.1
ILF3-205ENST00000586544 DIEXFQ68CQ4 756 aaKnown RBP15.31■□□□□ 0.04
ILF3-205ENST00000586544 RSF1Q96T23 1441 aaPredicted RBP15.28■□□□□ 0.04
ILF3-205ENST00000586544 GTF3C3Q9Y5Q9 886 aa15.27■□□□□ 0.04
ILF3-205ENST00000586544 CNGB1Q14028 1251 aaPredicted RBP15.2■□□□□ 0.02
ILF3-205ENST00000586544 EIF5BO60841 1220 aaKnown RBP15.19■□□□□ 0.02
ILF3-205ENST00000586544 NACADO15069 1562 aa15.11■□□□□ 0.01
ILF3-205ENST00000586544 ACIN1Q9UKV3 1341 aaKnown RBP15.11■□□□□ 0.01
ILF3-205ENST00000586544 CECR2Q9BXF3 1484 aa15.08■□□□□ 0
ILF3-205ENST00000586544 NEFLP07196 543 aa15.07■□□□□ 0
ILF3-205ENST00000586544 RB1CC1Q8TDY2 1594 aa15.06■□□□□ 0
ILF3-205ENST00000586544 POLR3GLQ9BT43 218 aa15.04■□□□□ -0
ILF3-205ENST00000586544 ANP32EQ9BTT0 268 aa15□□□□□ -0.01
ILF3-205ENST00000586544 NEUROD1Q13562 356 aa14.99□□□□□ -0.01
ILF3-205ENST00000586544 MROH2BQ7Z745 1585 aa14.98□□□□□ -0.01
ILF3-205ENST00000586544 BCANQ96GW7 911 aa14.97□□□□□ -0.01
ILF3-205ENST00000586544 FAM50AQ14320 339 aaKnown RBP14.96□□□□□ -0.01
ILF3-205ENST00000586544 CSRNP3Q8WYN3 585 aa14.95□□□□□ -0.02
ILF3-205ENST00000586544 DAXXQ9UER7 740 aaPredicted RBP14.92□□□□□ -0.02
ILF3-205ENST00000586544 ZNF316A6NFI3 1004 aaPredicted RBP14.92□□□□□ -0.02
ILF3-205ENST00000586544 P3H3Q8IVL6 736 aa14.89□□□□□ -0.03
ILF3-205ENST00000586544 WIZO95785 1651 aa14.86□□□□□ -0.03
ILF3-205ENST00000586544 BAZ1AQ9NRL2 1556 aaPredicted RBP14.8□□□□□ -0.04
ILF3-205ENST00000586544 ARID3CA6NKF2 412 aa14.79□□□□□ -0.04
ILF3-205ENST00000586544 ANO8Q9HCE9 1232 aaPredicted RBP14.75□□□□□ -0.05
ILF3-205ENST00000586544 TRIM52Q96A61 297 aa14.72□□□□□ -0.05
ILF3-205ENST00000586544 PLEKHG5O94827 1062 aa14.71□□□□□ -0.05
ILF3-205ENST00000586544 MIER1Q8N108 512 aa14.7□□□□□ -0.06
ILF3-205ENST00000586544 PODXL2Q9NZ53 605 aa14.68□□□□□ -0.06
ILF3-205ENST00000586544 HIRIP3Q9BW71 556 aaPredicted RBP14.67□□□□□ -0.06
ILF3-205ENST00000586544 ZNF326Q5BKZ1 582 aaKnown RBP14.67□□□□□ -0.06
ILF3-205ENST00000586544 CCDC88BA6NC98 1476 aa14.64□□□□□ -0.07
ILF3-205ENST00000586544 CCDC136Q96JN2 1154 aa14.64□□□□□ -0.07
ILF3-205ENST00000586544 TOP2AP11388 1531 aaKnown RBP14.62□□□□□ -0.07
ILF3-205ENST00000586544 DDX10Q13206 875 aaKnown RBP14.62□□□□□ -0.07
ILF3-205ENST00000586544 MYT1LQ9UL68 1186 aa14.62□□□□□ -0.07
ILF3-205ENST00000586544 SMARCA4P51532 1647 aa14.61□□□□□ -0.07
ILF3-205ENST00000586544 ABCC8Q09428 1581 aa14.61□□□□□ -0.07
ILF3-205ENST00000586544 ANP32CO43423 234 aa14.58□□□□□ -0.08
ILF3-205ENST00000586544 SOGA1O94964 1423 aa14.53□□□□□ -0.08
ILF3-205ENST00000586544 SMARCA2P51531 1590 aa14.52□□□□□ -0.08
ILF3-205ENST00000586544 FBLN2P98095 1184 aa14.52□□□□□ -0.08
ILF3-205ENST00000586544 FKBP8Q14318 412 aa14.52□□□□□ -0.09
ILF3-205ENST00000586544 PKNOX2Q96KN3 472 aa14.51□□□□□ -0.09
ILF3-205ENST00000586544 CEP162Q5TB80 1403 aa14.48□□□□□ -0.09
ILF3-205ENST00000586544 CHIC2Q9UKJ5 165 aa14.46□□□□□ -0.09
ILF3-205ENST00000586544 EIF4G1Q04637 1599 aaKnown RBP14.46□□□□□ -0.09
ILF3-205ENST00000586544 UBE2Q2Q8WVN8 375 aa14.45□□□□□ -0.1
ILF3-205ENST00000586544 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.45□□□□□ -0.1
ILF3-205ENST00000586544 SENP3-EIF4A1A0A087X0R7 540 aa14.45□□□□□ -0.1
ILF3-205ENST00000586544 UNC13AQ9UPW8 1703 aa14.44□□□□□ -0.1
ILF3-205ENST00000586544 SLC4A1APQ9BWU0 796 aaKnown RBP14.44□□□□□ -0.1
ILF3-205ENST00000586544 WRNQ14191 1432 aaPredicted RBP eCLIP14.43□□□□□ -0.1
ILF3-205ENST00000586544 CLIP1P30622 1438 aa14.43□□□□□ -0.1
ILF3-205ENST00000586544 TNIKQ9UKE5 1360 aa14.43□□□□□ -0.1
ILF3-205ENST00000586544 EEA1Q15075 1411 aa14.42□□□□□ -0.1
ILF3-205ENST00000586544 IRX6P78412 446 aaPredicted RBP14.42□□□□□ -0.1
ILF3-205ENST00000586544 ZNF777Q9ULD5 760 aaPredicted RBP14.42□□□□□ -0.1
ILF3-205ENST00000586544 RUSC2Q8N2Y8 1516 aa14.41□□□□□ -0.1
ILF3-205ENST00000586544 HNRNPUQ00839 825 aaKnown RBP eCLIP14.4□□□□□ -0.1
ILF3-205ENST00000586544 SALL2Q9Y467 1007 aaPredicted RBP14.39□□□□□ -0.11
ILF3-205ENST00000586544 BICRAQ9NZM4 1560 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms