RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 PRG4Q92954 1404 aaPredicted RBP21.05■□□□□ 0.96
ERCC2-207ENST00000586441 RUSC2Q8N2Y8 1516 aa21.05■□□□□ 0.96
ERCC2-207ENST00000586441 ERCC6L2Q5T890 1561 aa21.04■□□□□ 0.96
ERCC2-207ENST00000586441 RAPGEF2Q9Y4G8 1499 aa20.95■□□□□ 0.94
ERCC2-207ENST00000586441 TRHP20396 242 aaPredicted RBP20.95■□□□□ 0.94
ERCC2-207ENST00000586441 CARMIL2Q6F5E8 1435 aa20.87■□□□□ 0.93
ERCC2-207ENST00000586441 IQGAP2Q13576 1575 aa20.86■□□□□ 0.93
ERCC2-207ENST00000586441 PRXQ9BXM0 1461 aa20.83■□□□□ 0.93
ERCC2-207ENST00000586441 PTPRGP23470 1445 aa20.8■□□□□ 0.92
ERCC2-207ENST00000586441 NPM1P06748 294 aaKnown RBP eCLIP20.8■□□□□ 0.92
ERCC2-207ENST00000586441 TNIKQ9UKE5 1360 aa20.8■□□□□ 0.92
ERCC2-207ENST00000586441 EEA1Q15075 1411 aa20.78■□□□□ 0.92
ERCC2-207ENST00000586441 UGGT2Q9NYU1 1516 aa20.78■□□□□ 0.92
ERCC2-207ENST00000586441 CSRNP3Q8WYN3 585 aa20.77■□□□□ 0.92
ERCC2-207ENST00000586441 DISP1Q96F81 1524 aa20.74■□□□□ 0.91
ERCC2-207ENST00000586441 ADCY10Q96PN6 1610 aa20.73■□□□□ 0.91
ERCC2-207ENST00000586441 MAPKBP1O60336 1514 aa20.73■□□□□ 0.91
ERCC2-207ENST00000586441 CTTNBP2Q8WZ74 1663 aa20.71■□□□□ 0.91
ERCC2-207ENST00000586441 UHRF1BP1LA0JNW5 1464 aa20.69■□□□□ 0.9
ERCC2-207ENST00000586441 GOLGA3Q08378 1498 aa20.68■□□□□ 0.9
ERCC2-207ENST00000586441 KIAA0556O60303 1618 aa20.65■□□□□ 0.9
ERCC2-207ENST00000586441 ABCC10Q5T3U5 1492 aa20.65■□□□□ 0.9
ERCC2-207ENST00000586441 UACAQ9BZF9 1416 aa20.65■□□□□ 0.9
ERCC2-207ENST00000586441 ABCC2Q92887 1545 aa20.64■□□□□ 0.9
ERCC2-207ENST00000586441 KIF13AQ9H1H9 1805 aa20.63■□□□□ 0.89
ERCC2-207ENST00000586441 CHIC1Q5VXU3 224 aa20.62■□□□□ 0.89
ERCC2-207ENST00000586441 FAM69CQ0P6D2 419 aa20.58■□□□□ 0.89
ERCC2-207ENST00000586441 KDM5BQ9UGL1 1544 aa20.57■□□□□ 0.88
ERCC2-207ENST00000586441 TTBK1Q5TCY1 1321 aaPredicted RBP20.56■□□□□ 0.88
ERCC2-207ENST00000586441 FAM9AQ8IZU1 332 aaPredicted RBP20.56■□□□□ 0.88
ERCC2-207ENST00000586441 PLB1Q6P1J6 1458 aa20.56■□□□□ 0.88
ERCC2-207ENST00000586441 DIP2BQ9P265 1576 aa20.55■□□□□ 0.88
ERCC2-207ENST00000586441 KIF21BO75037 1637 aa20.51■□□□□ 0.87
ERCC2-207ENST00000586441 ASXL2Q76L83 1435 aa20.51■□□□□ 0.87
ERCC2-207ENST00000586441 ABCA8O94911 1581 aa20.47■□□□□ 0.87
ERCC2-207ENST00000586441 GLI2P10070 1586 aa20.47■□□□□ 0.87
ERCC2-207ENST00000586441 SAMD9Q5K651 1589 aa20.46■□□□□ 0.87
ERCC2-207ENST00000586441 ZCCHC11Q5TAX3 1644 aaKnown RBP20.44■□□□□ 0.86
ERCC2-207ENST00000586441 EPRSP07814 1512 aaKnown RBP20.39■□□□□ 0.85
ERCC2-207ENST00000586441 WDR7Q9Y4E6 1490 aa20.37■□□□□ 0.85
ERCC2-207ENST00000586441 P3H3Q8IVL6 736 aa20.37■□□□□ 0.85
ERCC2-207ENST00000586441 EFCAB5A4FU69 1503 aa20.36■□□□□ 0.85
ERCC2-207ENST00000586441 TSPOAP1O95153 1857 aa20.33■□□□□ 0.85
ERCC2-207ENST00000586441 MAP3K4Q9Y6R4 1608 aa20.32■□□□□ 0.84
ERCC2-207ENST00000586441 UBTFP17480 764 aaKnown RBP20.32■□□□□ 0.84
ERCC2-207ENST00000586441 ATP10BO94823 1461 aa20.31■□□□□ 0.84
ERCC2-207ENST00000586441 RAPGEF6Q8TEU7 1601 aa20.3■□□□□ 0.84
ERCC2-207ENST00000586441 TEX14Q8IWB6 1497 aa20.29■□□□□ 0.84
ERCC2-207ENST00000586441 KDM6BO15054 1643 aa20.28■□□□□ 0.84
ERCC2-207ENST00000586441 PPRC1Q5VV67 1664 aaKnown RBP20.28■□□□□ 0.84
ERCC2-207ENST00000586441 FHOD3Q2V2M9 1422 aa20.26■□□□□ 0.83
ERCC2-207ENST00000586441 CFAP43Q8NDM7 1665 aa20.24■□□□□ 0.83
ERCC2-207ENST00000586441 MAGI3Q5TCQ9 1506 aa20.23■□□□□ 0.83
ERCC2-207ENST00000586441 RANGAP1P46060 587 aaPredicted RBP20.23■□□□□ 0.83
ERCC2-207ENST00000586441 CD109Q6YHK3 1445 aa20.23■□□□□ 0.83
ERCC2-207ENST00000586441 KCNH8Q96L42 1107 aa20.23■□□□□ 0.83
ERCC2-207ENST00000586441 NUP153P49790 1475 aaKnown RBP20.23■□□□□ 0.83
ERCC2-207ENST00000586441 FMN1Q68DA7 1419 aa20.2■□□□□ 0.82
ERCC2-207ENST00000586441 PLEKHD1A6NEE1 506 aa20.17■□□□□ 0.82
ERCC2-207ENST00000586441 ARHGAP35Q9NRY4 1499 aa20.17■□□□□ 0.82
ERCC2-207ENST00000586441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.16■□□□□ 0.82
ERCC2-207ENST00000586441 HNRNPUL2Q1KMD3 747 aaKnown RBP20.16■□□□□ 0.82
ERCC2-207ENST00000586441 PHLDB1Q86UU1 1377 aa20.16■□□□□ 0.82
ERCC2-207ENST00000586441 ABCA9Q8IUA7 1624 aa20.15■□□□□ 0.82
ERCC2-207ENST00000586441 ARID3CA6NKF2 412 aa20.14■□□□□ 0.81
ERCC2-207ENST00000586441 COL17A1Q9UMD9 1497 aaPredicted RBP20.13■□□□□ 0.81
ERCC2-207ENST00000586441 EHMT2Q96KQ7 1210 aa20.12■□□□□ 0.81
ERCC2-207ENST00000586441 AEBP2Q6ZN18 517 aaPredicted RBP20.09■□□□□ 0.81
ERCC2-207ENST00000586441 ARAP3Q8WWN8 1544 aa20.08■□□□□ 0.81
ERCC2-207ENST00000586441 CDK11AQ9UQ88 783 aaPredicted RBP20.06■□□□□ 0.8
ERCC2-207ENST00000586441 HECW1Q76N89 1606 aa20.05■□□□□ 0.8
ERCC2-207ENST00000586441 NEO1Q92859 1461 aa20.05■□□□□ 0.8
ERCC2-207ENST00000586441 CDK13Q14004 1512 aaKnown RBP19.99■□□□□ 0.79
ERCC2-207ENST00000586441 CASKIN1Q8WXD9 1431 aa19.99■□□□□ 0.79
ERCC2-207ENST00000586441 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.98■□□□□ 0.79
ERCC2-207ENST00000586441 ATP1B4Q9UN42 357 aaPredicted RBP19.98■□□□□ 0.79
ERCC2-207ENST00000586441 CLIP1P30622 1438 aa19.97■□□□□ 0.79
ERCC2-207ENST00000586441 KDM4FA0A1W2PPD8 638 aa19.95■□□□□ 0.78
ERCC2-207ENST00000586441 CCDC18Q5T9S5 1454 aa19.94■□□□□ 0.78
ERCC2-207ENST00000586441 CFAP74Q9C0B2 1584 aa19.93■□□□□ 0.78
ERCC2-207ENST00000586441 PLCH2O75038 1416 aa19.93■□□□□ 0.78
ERCC2-207ENST00000586441 TROQ12816 1431 aaPredicted RBP19.93■□□□□ 0.78
ERCC2-207ENST00000586441 FANCAO15360 1455 aa19.92■□□□□ 0.78
ERCC2-207ENST00000586441 FYCO1Q9BQS8 1478 aa19.92■□□□□ 0.78
ERCC2-207ENST00000586441 AKNAQ7Z591 1439 aa19.9■□□□□ 0.78
ERCC2-207ENST00000586441 TTC37Q6PGP7 1564 aa19.9■□□□□ 0.78
ERCC2-207ENST00000586441 LRRIQ1Q96JM4 1722 aa19.88■□□□□ 0.77
ERCC2-207ENST00000586441 DENND4BO75064 1496 aaPredicted RBP19.87■□□□□ 0.77
ERCC2-207ENST00000586441 RAPGEF3O95398 923 aa19.87■□□□□ 0.77
ERCC2-207ENST00000586441 PCF11O94913 1555 aaKnown RBP19.87■□□□□ 0.77
ERCC2-207ENST00000586441 EFCAB2Q5VUJ9 269 aa19.86■□□□□ 0.77
ERCC2-207ENST00000586441 KIF14Q15058 1648 aa19.86■□□□□ 0.77
ERCC2-207ENST00000586441 ADGRL1O94910 1474 aa19.84■□□□□ 0.77
ERCC2-207ENST00000586441 MYO5CQ9NQX4 1742 aa19.83■□□□□ 0.77
ERCC2-207ENST00000586441 CEP162Q5TB80 1403 aa19.81■□□□□ 0.76
ERCC2-207ENST00000586441 FRMPD1Q5SYB0 1578 aa19.81■□□□□ 0.76
ERCC2-207ENST00000586441 RICTORQ6R327 1708 aa19.81■□□□□ 0.76
ERCC2-207ENST00000586441 MAGI2Q86UL8 1455 aa19.8■□□□□ 0.76
ERCC2-207ENST00000586441 SCAPERQ9BY12 1400 aa19.78■□□□□ 0.76
ERCC2-207ENST00000586441 ZMYM4Q5VZL5 1548 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms