RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 KIF13AQ9H1H9 1805 aa21.19■□□□□ 0.98
BRCA1-225ENST00000586385 IGF1RP08069 1367 aa21.17■□□□□ 0.98
BRCA1-225ENST00000586385 ABCC10Q5T3U5 1492 aa21.13■□□□□ 0.97
BRCA1-225ENST00000586385 KIAA0586Q9BVV6 1533 aa21.11■□□□□ 0.97
BRCA1-225ENST00000586385 ADCY10Q96PN6 1610 aa21.11■□□□□ 0.97
BRCA1-225ENST00000586385 MAPKBP1O60336 1514 aa21.09■□□□□ 0.97
BRCA1-225ENST00000586385 FAM69CQ0P6D2 419 aa21.09■□□□□ 0.97
BRCA1-225ENST00000586385 KIF27Q86VH2 1401 aa21.07■□□□□ 0.96
BRCA1-225ENST00000586385 DIP2BQ9P265 1576 aa21.06■□□□□ 0.96
BRCA1-225ENST00000586385 NPM1P06748 294 aaKnown RBP eCLIP21.02■□□□□ 0.96
BRCA1-225ENST00000586385 CUL7Q14999 1698 aa21.01■□□□□ 0.95
BRCA1-225ENST00000586385 CARMIL1Q5VZK9 1371 aa20.97■□□□□ 0.95
BRCA1-225ENST00000586385 PTPRGP23470 1445 aa20.95■□□□□ 0.94
BRCA1-225ENST00000586385 TNIKQ9UKE5 1360 aa20.89■□□□□ 0.93
BRCA1-225ENST00000586385 TTBK1Q5TCY1 1321 aaPredicted RBP20.87■□□□□ 0.93
BRCA1-225ENST00000586385 KDM6BO15054 1643 aa20.87■□□□□ 0.93
BRCA1-225ENST00000586385 KDM4FA0A1W2PPD8 638 aa20.87■□□□□ 0.93
BRCA1-225ENST00000586385 ABCC2Q92887 1545 aa20.87■□□□□ 0.93
BRCA1-225ENST00000586385 CARMIL2Q6F5E8 1435 aa20.85■□□□□ 0.93
BRCA1-225ENST00000586385 IQGAP2Q13576 1575 aa20.85■□□□□ 0.93
BRCA1-225ENST00000586385 DISP1Q96F81 1524 aa20.84■□□□□ 0.93
BRCA1-225ENST00000586385 ASXL2Q76L83 1435 aa20.83■□□□□ 0.93
BRCA1-225ENST00000586385 UHRF1BP1LA0JNW5 1464 aa20.82■□□□□ 0.92
BRCA1-225ENST00000586385 TSPOAP1O95153 1857 aa20.81■□□□□ 0.92
BRCA1-225ENST00000586385 UACAQ9BZF9 1416 aa20.79■□□□□ 0.92
BRCA1-225ENST00000586385 PLB1Q6P1J6 1458 aa20.78■□□□□ 0.92
BRCA1-225ENST00000586385 PPRC1Q5VV67 1664 aaKnown RBP20.77■□□□□ 0.92
BRCA1-225ENST00000586385 GLI2P10070 1586 aa20.77■□□□□ 0.92
BRCA1-225ENST00000586385 UGGT2Q9NYU1 1516 aa20.75■□□□□ 0.91
BRCA1-225ENST00000586385 RAPGEF2Q9Y4G8 1499 aa20.75■□□□□ 0.91
BRCA1-225ENST00000586385 KDM5BQ9UGL1 1544 aa20.73■□□□□ 0.91
BRCA1-225ENST00000586385 COL17A1Q9UMD9 1497 aaPredicted RBP20.73■□□□□ 0.91
BRCA1-225ENST00000586385 EPRSP07814 1512 aaKnown RBP20.71■□□□□ 0.91
BRCA1-225ENST00000586385 KIAA0556O60303 1618 aa20.68■□□□□ 0.9
BRCA1-225ENST00000586385 ZCCHC11Q5TAX3 1644 aaKnown RBP20.64■□□□□ 0.9
BRCA1-225ENST00000586385 MAP3K4Q9Y6R4 1608 aa20.64■□□□□ 0.9
BRCA1-225ENST00000586385 ADGRL1O94910 1474 aa20.6■□□□□ 0.89
BRCA1-225ENST00000586385 WDR7Q9Y4E6 1490 aa20.58■□□□□ 0.89
BRCA1-225ENST00000586385 TEX14Q8IWB6 1497 aa20.56■□□□□ 0.88
BRCA1-225ENST00000586385 PRXQ9BXM0 1461 aa20.54■□□□□ 0.88
BRCA1-225ENST00000586385 ABCA8O94911 1581 aa20.54■□□□□ 0.88
BRCA1-225ENST00000586385 CTTNBP2Q8WZ74 1663 aa20.5■□□□□ 0.87
BRCA1-225ENST00000586385 GOLGA3Q08378 1498 aa20.5■□□□□ 0.87
BRCA1-225ENST00000586385 MAGI3Q5TCQ9 1506 aa20.48■□□□□ 0.87
BRCA1-225ENST00000586385 CD109Q6YHK3 1445 aa20.46■□□□□ 0.87
BRCA1-225ENST00000586385 KCNH8Q96L42 1107 aa20.45■□□□□ 0.86
BRCA1-225ENST00000586385 ILDR1Q86SU0 546 aaPredicted RBP20.4■□□□□ 0.86
BRCA1-225ENST00000586385 CFAP43Q8NDM7 1665 aa20.4■□□□□ 0.86
BRCA1-225ENST00000586385 ATP10BO94823 1461 aa20.38■□□□□ 0.85
BRCA1-225ENST00000586385 ARID3CA6NKF2 412 aa20.37■□□□□ 0.85
BRCA1-225ENST00000586385 P3H3Q8IVL6 736 aa20.37■□□□□ 0.85
BRCA1-225ENST00000586385 HECW2Q9P2P5 1572 aa20.37■□□□□ 0.85
BRCA1-225ENST00000586385 ARAP3Q8WWN8 1544 aa20.32■□□□□ 0.84
BRCA1-225ENST00000586385 SAMD9Q5K651 1589 aa20.29■□□□□ 0.84
BRCA1-225ENST00000586385 CSRNP3Q8WYN3 585 aa20.28■□□□□ 0.84
BRCA1-225ENST00000586385 KIF21BO75037 1637 aa20.27■□□□□ 0.83
BRCA1-225ENST00000586385 ABCA9Q8IUA7 1624 aa20.26■□□□□ 0.83
BRCA1-225ENST00000586385 RAPGEF3O95398 923 aa20.22■□□□□ 0.83
BRCA1-225ENST00000586385 NUP153P49790 1475 aaKnown RBP20.22■□□□□ 0.83
BRCA1-225ENST00000586385 RAPGEF6Q8TEU7 1601 aa20.21■□□□□ 0.83
BRCA1-225ENST00000586385 PHLDB1Q86UU1 1377 aa20.21■□□□□ 0.83
BRCA1-225ENST00000586385 NEO1Q92859 1461 aa20.18■□□□□ 0.82
BRCA1-225ENST00000586385 FRMPD1Q5SYB0 1578 aa20.18■□□□□ 0.82
BRCA1-225ENST00000586385 FHOD3Q2V2M9 1422 aa20.18■□□□□ 0.82
BRCA1-225ENST00000586385 FAM9AQ8IZU1 332 aaPredicted RBP20.15■□□□□ 0.82
BRCA1-225ENST00000586385 ADAMTSL3P82987 1691 aa20.15■□□□□ 0.82
BRCA1-225ENST00000586385 PTPRMP28827 1452 aa20.14■□□□□ 0.81
BRCA1-225ENST00000586385 RANGAP1P46060 587 aaPredicted RBP20.13■□□□□ 0.81
BRCA1-225ENST00000586385 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.12■□□□□ 0.81
BRCA1-225ENST00000586385 HNRNPUL2Q1KMD3 747 aaKnown RBP20.12■□□□□ 0.81
BRCA1-225ENST00000586385 EEA1Q15075 1411 aa20.11■□□□□ 0.81
BRCA1-225ENST00000586385 BCORL1Q5H9F3 1711 aa20.05■□□□□ 0.8
BRCA1-225ENST00000586385 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.05■□□□□ 0.8
BRCA1-225ENST00000586385 AKNAQ7Z591 1439 aa20.04■□□□□ 0.8
BRCA1-225ENST00000586385 ARHGEF40Q8TER5 1519 aa20.04■□□□□ 0.8
BRCA1-225ENST00000586385 PLEKHD1A6NEE1 506 aa20.04■□□□□ 0.8
BRCA1-225ENST00000586385 MADDQ8WXG6 1647 aa20.04■□□□□ 0.8
BRCA1-225ENST00000586385 DENND4BO75064 1496 aaPredicted RBP20.04■□□□□ 0.8
BRCA1-225ENST00000586385 TTC37Q6PGP7 1564 aa20.01■□□□□ 0.79
BRCA1-225ENST00000586385 FANCAO15360 1455 aa20.01■□□□□ 0.79
BRCA1-225ENST00000586385 RICTORQ6R327 1708 aa20.01■□□□□ 0.79
BRCA1-225ENST00000586385 ARID4BQ4LE39 1312 aaPredicted RBP20.01■□□□□ 0.79
BRCA1-225ENST00000586385 EFCAB5A4FU69 1503 aa20■□□□□ 0.79
BRCA1-225ENST00000586385 LMTK3Q96Q04 1460 aa19.99■□□□□ 0.79
BRCA1-225ENST00000586385 CDK13Q14004 1512 aaKnown RBP19.99■□□□□ 0.79
BRCA1-225ENST00000586385 YEATS2Q9ULM3 1422 aa19.98■□□□□ 0.79
BRCA1-225ENST00000586385 PCF11O94913 1555 aaKnown RBP19.97■□□□□ 0.79
BRCA1-225ENST00000586385 ZMYM4Q5VZL5 1548 aa19.97■□□□□ 0.79
BRCA1-225ENST00000586385 SIGLEC1Q9BZZ2 1709 aa19.96■□□□□ 0.79
BRCA1-225ENST00000586385 FBXO41Q8TF61 875 aa19.94■□□□□ 0.78
BRCA1-225ENST00000586385 CFAP74Q9C0B2 1584 aa19.92■□□□□ 0.78
BRCA1-225ENST00000586385 RIMS1Q86UR5 1692 aaKnown RBP19.92■□□□□ 0.78
BRCA1-225ENST00000586385 PLCH2O75038 1416 aa19.92■□□□□ 0.78
BRCA1-225ENST00000586385 ZFYVE16Q7Z3T8 1539 aa19.92■□□□□ 0.78
BRCA1-225ENST00000586385 POGZQ7Z3K3 1410 aa19.9■□□□□ 0.78
BRCA1-225ENST00000586385 SCAPERQ9BY12 1400 aa19.9■□□□□ 0.78
BRCA1-225ENST00000586385 HECW1Q76N89 1606 aa19.9■□□□□ 0.78
BRCA1-225ENST00000586385 MAGI2Q86UL8 1455 aa19.89■□□□□ 0.77
BRCA1-225ENST00000586385 ARHGAP35Q9NRY4 1499 aa19.88■□□□□ 0.77
BRCA1-225ENST00000586385 HSPA2P54652 639 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms