RNA–Protein interactions for RNA: ENST00000586144.1

CXXC1-203, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 474 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-203ENST00000586144 PRG4Q92954 1404 aaPredicted RBP25.62■■□□□ 1.69
CXXC1-203ENST00000586144 CUL7Q14999 1698 aa25.61■■□□□ 1.69
CXXC1-203ENST00000586144 CARMIL1Q5VZK9 1371 aa25.57■■□□□ 1.68
CXXC1-203ENST00000586144 KIAA0586Q9BVV6 1533 aa25.5■■□□□ 1.67
CXXC1-203ENST00000586144 RAPGEF2Q9Y4G8 1499 aa25.35■■□□□ 1.65
CXXC1-203ENST00000586144 TTBK1Q5TCY1 1321 aaPredicted RBP25.34■■□□□ 1.65
CXXC1-203ENST00000586144 IQGAP2Q13576 1575 aa25.31■■□□□ 1.64
CXXC1-203ENST00000586144 ADCY10Q96PN6 1610 aa25.3■■□□□ 1.64
CXXC1-203ENST00000586144 DISP1Q96F81 1524 aa25.23■■□□□ 1.63
CXXC1-203ENST00000586144 PTPRGP23470 1445 aa25.23■■□□□ 1.63
CXXC1-203ENST00000586144 CARMIL2Q6F5E8 1435 aa25.2■■□□□ 1.63
CXXC1-203ENST00000586144 TNIKQ9UKE5 1360 aa25.2■■□□□ 1.63
CXXC1-203ENST00000586144 PRXQ9BXM0 1461 aa25.2■■□□□ 1.62
CXXC1-203ENST00000586144 KIF13AQ9H1H9 1805 aa25.19■■□□□ 1.62
CXXC1-203ENST00000586144 NPM1P06748 294 aaKnown RBP eCLIP25.17■■□□□ 1.62
CXXC1-203ENST00000586144 UGGT2Q9NYU1 1516 aa25.17■■□□□ 1.62
CXXC1-203ENST00000586144 CTTNBP2Q8WZ74 1663 aa25.13■■□□□ 1.61
CXXC1-203ENST00000586144 MAPKBP1O60336 1514 aa25.12■■□□□ 1.61
CXXC1-203ENST00000586144 KIAA0556O60303 1618 aa25.11■■□□□ 1.61
CXXC1-203ENST00000586144 FAM69CQ0P6D2 419 aa25.1■■□□□ 1.61
CXXC1-203ENST00000586144 ABCC10Q5T3U5 1492 aa25.09■■□□□ 1.61
CXXC1-203ENST00000586144 CSRNP3Q8WYN3 585 aa25.08■■□□□ 1.61
CXXC1-203ENST00000586144 FAM9AQ8IZU1 332 aaPredicted RBP25.07■■□□□ 1.6
CXXC1-203ENST00000586144 DIP2BQ9P265 1576 aa25.06■■□□□ 1.6
CXXC1-203ENST00000586144 UACAQ9BZF9 1416 aa25.05■■□□□ 1.6
CXXC1-203ENST00000586144 ABCC2Q92887 1545 aa25.05■■□□□ 1.6
CXXC1-203ENST00000586144 UHRF1BP1LA0JNW5 1464 aa25.01■■□□□ 1.59
CXXC1-203ENST00000586144 CHIC1Q5VXU3 224 aa24.98■■□□□ 1.59
CXXC1-203ENST00000586144 ASXL2Q76L83 1435 aa24.96■■□□□ 1.59
CXXC1-203ENST00000586144 PLB1Q6P1J6 1458 aa24.96■■□□□ 1.59
CXXC1-203ENST00000586144 P3H3Q8IVL6 736 aa24.95■■□□□ 1.58
CXXC1-203ENST00000586144 GOLGA3Q08378 1498 aa24.94■■□□□ 1.58
CXXC1-203ENST00000586144 TSPOAP1O95153 1857 aa24.93■■□□□ 1.58
CXXC1-203ENST00000586144 EEA1Q15075 1411 aa24.93■■□□□ 1.58
CXXC1-203ENST00000586144 KDM5BQ9UGL1 1544 aa24.92■■□□□ 1.58
CXXC1-203ENST00000586144 ZCCHC11Q5TAX3 1644 aaKnown RBP24.91■■□□□ 1.58
CXXC1-203ENST00000586144 RANGAP1P46060 587 aaPredicted RBP24.88■■□□□ 1.57
CXXC1-203ENST00000586144 ABCA8O94911 1581 aa24.87■■□□□ 1.57
CXXC1-203ENST00000586144 EHMT2Q96KQ7 1210 aa24.86■■□□□ 1.57
CXXC1-203ENST00000586144 SAMD9Q5K651 1589 aa24.81■■□□□ 1.56
CXXC1-203ENST00000586144 ARID3CA6NKF2 412 aa24.81■■□□□ 1.56
CXXC1-203ENST00000586144 EPRSP07814 1512 aaKnown RBP24.81■■□□□ 1.56
CXXC1-203ENST00000586144 GLI2P10070 1586 aa24.8■■□□□ 1.56
CXXC1-203ENST00000586144 PPRC1Q5VV67 1664 aaKnown RBP24.79■■□□□ 1.56
CXXC1-203ENST00000586144 KIF21BO75037 1637 aa24.78■■□□□ 1.56
CXXC1-203ENST00000586144 WDR7Q9Y4E6 1490 aa24.74■■□□□ 1.55
CXXC1-203ENST00000586144 KDM6BO15054 1643 aa24.74■■□□□ 1.55
CXXC1-203ENST00000586144 FHOD3Q2V2M9 1422 aa24.72■■□□□ 1.55
CXXC1-203ENST00000586144 KCNH8Q96L42 1107 aa24.71■■□□□ 1.55
CXXC1-203ENST00000586144 MAP3K4Q9Y6R4 1608 aa24.71■■□□□ 1.55
CXXC1-203ENST00000586144 ATP10BO94823 1461 aa24.68■■□□□ 1.54
CXXC1-203ENST00000586144 RAPGEF6Q8TEU7 1601 aa24.65■■□□□ 1.54
CXXC1-203ENST00000586144 UBTFP17480 764 aaKnown RBP24.64■■□□□ 1.54
CXXC1-203ENST00000586144 COL17A1Q9UMD9 1497 aaPredicted RBP24.64■■□□□ 1.53
CXXC1-203ENST00000586144 NUP153P49790 1475 aaKnown RBP24.59■■□□□ 1.53
CXXC1-203ENST00000586144 AEBP2Q6ZN18 517 aaPredicted RBP24.59■■□□□ 1.53
CXXC1-203ENST00000586144 CD109Q6YHK3 1445 aa24.57■■□□□ 1.52
CXXC1-203ENST00000586144 EFCAB5A4FU69 1503 aa24.56■■□□□ 1.52
CXXC1-203ENST00000586144 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.55■■□□□ 1.52
CXXC1-203ENST00000586144 HNRNPUL2Q1KMD3 747 aaKnown RBP24.55■■□□□ 1.52
CXXC1-203ENST00000586144 TEX14Q8IWB6 1497 aa24.54■■□□□ 1.52
CXXC1-203ENST00000586144 CFAP43Q8NDM7 1665 aa24.53■■□□□ 1.52
CXXC1-203ENST00000586144 ARHGAP35Q9NRY4 1499 aa24.5■■□□□ 1.51
CXXC1-203ENST00000586144 MAGI3Q5TCQ9 1506 aa24.5■■□□□ 1.51
CXXC1-203ENST00000586144 KDM4FA0A1W2PPD8 638 aa24.45■■□□□ 1.5
CXXC1-203ENST00000586144 ABCA9Q8IUA7 1624 aa24.43■■□□□ 1.5
CXXC1-203ENST00000586144 CDK13Q14004 1512 aaKnown RBP24.43■■□□□ 1.5
CXXC1-203ENST00000586144 ATP1B4Q9UN42 357 aaPredicted RBP24.39■■□□□ 1.49
CXXC1-203ENST00000586144 PLEKHD1A6NEE1 506 aa24.37■■□□□ 1.49
CXXC1-203ENST00000586144 FMN1Q68DA7 1419 aa24.34■■□□□ 1.49
CXXC1-203ENST00000586144 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.3■■□□□ 1.48
CXXC1-203ENST00000586144 ARAP3Q8WWN8 1544 aa24.3■■□□□ 1.48
CXXC1-203ENST00000586144 TTC37Q6PGP7 1564 aa24.29■■□□□ 1.48
CXXC1-203ENST00000586144 HECW1Q76N89 1606 aa24.29■■□□□ 1.48
CXXC1-203ENST00000586144 ADGRL1O94910 1474 aa24.28■■□□□ 1.48
CXXC1-203ENST00000586144 LRRIQ1Q96JM4 1722 aa24.28■■□□□ 1.48
CXXC1-203ENST00000586144 RAPGEF3O95398 923 aa24.28■■□□□ 1.48
CXXC1-203ENST00000586144 NEO1Q92859 1461 aa24.24■■□□□ 1.47
CXXC1-203ENST00000586144 PCF11O94913 1555 aaKnown RBP24.21■■□□□ 1.47
CXXC1-203ENST00000586144 FRMPD1Q5SYB0 1578 aa24.21■■□□□ 1.47
CXXC1-203ENST00000586144 CLIP1P30622 1438 aa24.19■■□□□ 1.46
CXXC1-203ENST00000586144 PHLDB1Q86UU1 1377 aa24.19■■□□□ 1.46
CXXC1-203ENST00000586144 KIF14Q15058 1648 aa24.18■■□□□ 1.46
CXXC1-203ENST00000586144 FANCAO15360 1455 aa24.18■■□□□ 1.46
CXXC1-203ENST00000586144 AKNAQ7Z591 1439 aa24.18■■□□□ 1.46
CXXC1-203ENST00000586144 CASKIN1Q8WXD9 1431 aa24.16■■□□□ 1.46
CXXC1-203ENST00000586144 TROQ12816 1431 aaPredicted RBP24.13■■□□□ 1.45
CXXC1-203ENST00000586144 CDK11AQ9UQ88 783 aaPredicted RBP24.12■■□□□ 1.45
CXXC1-203ENST00000586144 PLCH2O75038 1416 aa24.11■■□□□ 1.45
CXXC1-203ENST00000586144 DENND4BO75064 1496 aaPredicted RBP24.11■■□□□ 1.45
CXXC1-203ENST00000586144 RICTORQ6R327 1708 aa24.1■■□□□ 1.45
CXXC1-203ENST00000586144 CFAP74Q9C0B2 1584 aa24.08■■□□□ 1.45
CXXC1-203ENST00000586144 MYO5CQ9NQX4 1742 aa24.07■■□□□ 1.44
CXXC1-203ENST00000586144 FYCO1Q9BQS8 1478 aa24.06■■□□□ 1.44
CXXC1-203ENST00000586144 LOC105371045A0A1W2PR82 267 aa24.05■■□□□ 1.44
CXXC1-203ENST00000586144 CCDC18Q5T9S5 1454 aa24.05■■□□□ 1.44
CXXC1-203ENST00000586144 SCAPERQ9BY12 1400 aa24.03■■□□□ 1.44
CXXC1-203ENST00000586144 CEP162Q5TB80 1403 aa24.01■■□□□ 1.43
CXXC1-203ENST00000586144 EFCAB2Q5VUJ9 269 aa24■■□□□ 1.43
CXXC1-203ENST00000586144 YEATS2Q9ULM3 1422 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms