RNA–Protein interactions for RNA: ENST00000585932.5

PTBP1-207, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-207ENST00000585932 JPH4Q96JJ6 628 aa35.77■■■■□ 3.32
PTBP1-207ENST00000585932 PRG4Q92954 1404 aaPredicted RBP35.76■■■■□ 3.32
PTBP1-207ENST00000585932 KIAA0586Q9BVV6 1533 aa35.71■■■■□ 3.31
PTBP1-207ENST00000585932 RAPGEF2Q9Y4G8 1499 aa35.54■■■■□ 3.28
PTBP1-207ENST00000585932 TRHP20396 242 aaPredicted RBP35.53■■■■□ 3.28
PTBP1-207ENST00000585932 IQGAP2Q13576 1575 aa35.46■■■■□ 3.27
PTBP1-207ENST00000585932 PRXQ9BXM0 1461 aa35.39■■■■□ 3.26
PTBP1-207ENST00000585932 ADCY10Q96PN6 1610 aa35.32■■■■□ 3.25
PTBP1-207ENST00000585932 DISP1Q96F81 1524 aa35.32■■■■□ 3.24
PTBP1-207ENST00000585932 UGGT2Q9NYU1 1516 aa35.27■■■■□ 3.24
PTBP1-207ENST00000585932 PTPRGP23470 1445 aa35.25■■■■□ 3.23
PTBP1-207ENST00000585932 CARMIL2Q6F5E8 1435 aa35.25■■■■□ 3.23
PTBP1-207ENST00000585932 TNIKQ9UKE5 1360 aa35.24■■■■□ 3.23
PTBP1-207ENST00000585932 CTTNBP2Q8WZ74 1663 aa35.22■■■■□ 3.23
PTBP1-207ENST00000585932 TTBK1Q5TCY1 1321 aaPredicted RBP35.19■■■■□ 3.22
PTBP1-207ENST00000585932 CSRNP3Q8WYN3 585 aa35.18■■■■□ 3.22
PTBP1-207ENST00000585932 KIAA0556O60303 1618 aa35.15■■■■□ 3.22
PTBP1-207ENST00000585932 CHIC1Q5VXU3 224 aa35.13■■■■□ 3.21
PTBP1-207ENST00000585932 KIF13AQ9H1H9 1805 aa35.11■■■■□ 3.21
PTBP1-207ENST00000585932 MAPKBP1O60336 1514 aa35.11■■■■□ 3.21
PTBP1-207ENST00000585932 EEA1Q15075 1411 aa35.09■■■■□ 3.21
PTBP1-207ENST00000585932 NPM1P06748 294 aaKnown RBP eCLIP35.05■■■■□ 3.2
PTBP1-207ENST00000585932 FAM9AQ8IZU1 332 aaPredicted RBP35.03■■■■□ 3.2
PTBP1-207ENST00000585932 UHRF1BP1LA0JNW5 1464 aa35.02■■■■□ 3.2
PTBP1-207ENST00000585932 ABCC2Q92887 1545 aa35.01■■■■□ 3.2
PTBP1-207ENST00000585932 UACAQ9BZF9 1416 aa35.01■■■■□ 3.2
PTBP1-207ENST00000585932 ABCC10Q5T3U5 1492 aa35.01■■■■□ 3.19
PTBP1-207ENST00000585932 DIP2BQ9P265 1576 aa34.97■■■■□ 3.19
PTBP1-207ENST00000585932 GOLGA3Q08378 1498 aa34.94■■■■□ 3.18
PTBP1-207ENST00000585932 FAM69CQ0P6D2 419 aa34.91■■■■□ 3.18
PTBP1-207ENST00000585932 PLB1Q6P1J6 1458 aa34.88■■■■□ 3.17
PTBP1-207ENST00000585932 KDM5BQ9UGL1 1544 aa34.87■■■■□ 3.17
PTBP1-207ENST00000585932 KIF21BO75037 1637 aa34.85■■■■□ 3.17
PTBP1-207ENST00000585932 ASXL2Q76L83 1435 aa34.84■■■■□ 3.17
PTBP1-207ENST00000585932 ABCA8O94911 1581 aa34.82■■■■□ 3.16
PTBP1-207ENST00000585932 SAMD9Q5K651 1589 aa34.81■■■■□ 3.16
PTBP1-207ENST00000585932 ZCCHC11Q5TAX3 1644 aaKnown RBP34.81■■■■□ 3.16
PTBP1-207ENST00000585932 P3H3Q8IVL6 736 aa34.79■■■■□ 3.16
PTBP1-207ENST00000585932 TSPOAP1O95153 1857 aa34.67■■■■□ 3.14
PTBP1-207ENST00000585932 GLI2P10070 1586 aa34.66■■■■□ 3.14
PTBP1-207ENST00000585932 RANGAP1P46060 587 aaPredicted RBP34.66■■■■□ 3.14
PTBP1-207ENST00000585932 EHMT2Q96KQ7 1210 aa34.65■■■■□ 3.14
PTBP1-207ENST00000585932 EPRSP07814 1512 aaKnown RBP34.65■■■■□ 3.14
PTBP1-207ENST00000585932 FHOD3Q2V2M9 1422 aa34.6■■■■□ 3.13
PTBP1-207ENST00000585932 PPRC1Q5VV67 1664 aaKnown RBP34.6■■■■□ 3.13
PTBP1-207ENST00000585932 WDR7Q9Y4E6 1490 aa34.58■■■■□ 3.13
PTBP1-207ENST00000585932 ARID3CA6NKF2 412 aa34.54■■■■□ 3.12
PTBP1-207ENST00000585932 ATP10BO94823 1461 aa34.52■■■■□ 3.12
PTBP1-207ENST00000585932 MAP3K4Q9Y6R4 1608 aa34.52■■■■□ 3.12
PTBP1-207ENST00000585932 RAPGEF6Q8TEU7 1601 aa34.52■■■■□ 3.12
PTBP1-207ENST00000585932 UBTFP17480 764 aaKnown RBP34.5■■■■□ 3.11
PTBP1-207ENST00000585932 EFCAB5A4FU69 1503 aa34.5■■■■□ 3.11
PTBP1-207ENST00000585932 KDM6BO15054 1643 aa34.45■■■■□ 3.11
PTBP1-207ENST00000585932 NUP153P49790 1475 aaKnown RBP34.45■■■■□ 3.1
PTBP1-207ENST00000585932 KCNH8Q96L42 1107 aa34.39■■■■□ 3.1
PTBP1-207ENST00000585932 ARHGAP35Q9NRY4 1499 aa34.37■■■■□ 3.09
PTBP1-207ENST00000585932 COL17A1Q9UMD9 1497 aaPredicted RBP34.34■■■■□ 3.09
PTBP1-207ENST00000585932 CFAP43Q8NDM7 1665 aa34.31■■■■□ 3.08
PTBP1-207ENST00000585932 CD109Q6YHK3 1445 aa34.29■■■■□ 3.08
PTBP1-207ENST00000585932 TEX14Q8IWB6 1497 aa34.27■■■■□ 3.08
PTBP1-207ENST00000585932 MAGI3Q5TCQ9 1506 aa34.25■■■■□ 3.07
PTBP1-207ENST00000585932 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.21■■■■□ 3.07
PTBP1-207ENST00000585932 HNRNPUL2Q1KMD3 747 aaKnown RBP34.21■■■■□ 3.07
PTBP1-207ENST00000585932 ABCA9Q8IUA7 1624 aa34.2■■■■□ 3.07
PTBP1-207ENST00000585932 CDK13Q14004 1512 aaKnown RBP34.18■■■■□ 3.06
PTBP1-207ENST00000585932 FMN1Q68DA7 1419 aa34.16■■■■□ 3.06
PTBP1-207ENST00000585932 HECW1Q76N89 1606 aa34.07■■■■□ 3.04
PTBP1-207ENST00000585932 PLEKHD1A6NEE1 506 aa34.06■■■■□ 3.04
PTBP1-207ENST00000585932 LRRIQ1Q96JM4 1722 aa34.03■■■■□ 3.04
PTBP1-207ENST00000585932 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34■■■■□ 3.037e-8■■□□□ 14.2
PTBP1-207ENST00000585932 ATP1B4Q9UN42 357 aaPredicted RBP34■■■■□ 3.03
PTBP1-207ENST00000585932 ARAP3Q8WWN8 1544 aa33.98■■■■□ 3.03
PTBP1-207ENST00000585932 TTC37Q6PGP7 1564 aa33.98■■■■□ 3.03
PTBP1-207ENST00000585932 CLIP1P30622 1438 aa33.97■■■■□ 3.03
PTBP1-207ENST00000585932 PCF11O94913 1555 aaKnown RBP33.96■■■■□ 3.03
PTBP1-207ENST00000585932 AEBP2Q6ZN18 517 aaPredicted RBP33.95■■■■□ 3.03
PTBP1-207ENST00000585932 KDM4FA0A1W2PPD8 638 aa33.94■■■■□ 3.02
PTBP1-207ENST00000585932 CASKIN1Q8WXD9 1431 aa33.92■■■■□ 3.02
PTBP1-207ENST00000585932 NEO1Q92859 1461 aa33.91■■■■□ 3.02
PTBP1-207ENST00000585932 KIF14Q15058 1648 aa33.86■■■■□ 3.01
PTBP1-207ENST00000585932 PHLDB1Q86UU1 1377 aa33.85■■■■□ 3.01
PTBP1-207ENST00000585932 FRMPD1Q5SYB0 1578 aa33.83■■■■□ 3.01
PTBP1-207ENST00000585932 RAPGEF3O95398 923 aa33.82■■■■□ 3
PTBP1-207ENST00000585932 TROQ12816 1431 aaPredicted RBP33.81■■■■□ 3
PTBP1-207ENST00000585932 FANCAO15360 1455 aa33.81■■■■□ 3
PTBP1-207ENST00000585932 FYCO1Q9BQS8 1478 aa33.8■■■■□ 3
PTBP1-207ENST00000585932 ADGRL1O94910 1474 aa33.77■■■■□ 3
PTBP1-207ENST00000585932 CDK11AQ9UQ88 783 aaPredicted RBP33.77■■■■□ 3
PTBP1-207ENST00000585932 AKNAQ7Z591 1439 aa33.77■■■■□ 3
PTBP1-207ENST00000585932 PLCH2O75038 1416 aa33.76■■■□□ 2.99
PTBP1-207ENST00000585932 CCDC18Q5T9S5 1454 aa33.76■■■□□ 2.99
PTBP1-207ENST00000585932 CEP162Q5TB80 1403 aa33.75■■■□□ 2.99
PTBP1-207ENST00000585932 LOC105371045A0A1W2PR82 267 aa33.73■■■□□ 2.99
PTBP1-207ENST00000585932 CFAP74Q9C0B2 1584 aa33.72■■■□□ 2.99
PTBP1-207ENST00000585932 RICTORQ6R327 1708 aa33.7■■■□□ 2.98
PTBP1-207ENST00000585932 MYO5CQ9NQX4 1742 aa33.68■■■□□ 2.98
PTBP1-207ENST00000585932 DENND4BO75064 1496 aaPredicted RBP33.67■■■□□ 2.98
PTBP1-207ENST00000585932 SCAPERQ9BY12 1400 aa33.57■■■□□ 2.96
PTBP1-207ENST00000585932 CDC42BPBQ9Y5S2 1711 aa33.56■■■□□ 2.96
PTBP1-207ENST00000585932 ZMYM4Q5VZL5 1548 aa33.56■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms