RNA–Protein interactions for RNA: ENST00000585850.1

ABCA8-206, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 1 (best)

Gene ABCA8, Length 1,502 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-206ENST00000585850 IGF1RP08069 1367 aa13.91□□□□□ -0.18
ABCA8-206ENST00000585850 HNRNPUL2Q1KMD3 747 aaKnown RBP13.89□□□□□ -0.19
ABCA8-206ENST00000585850 CARMIL1Q5VZK9 1371 aa13.86□□□□□ -0.19
ABCA8-206ENST00000585850 MAP3K1Q13233 1512 aa13.86□□□□□ -0.19
ABCA8-206ENST00000585850 LAMC3Q9Y6N6 1575 aa13.85□□□□□ -0.19
ABCA8-206ENST00000585850 CUL7Q14999 1698 aa13.85□□□□□ -0.19
ABCA8-206ENST00000585850 RRBP1Q9P2E9 1410 aaKnown RBP13.85□□□□□ -0.19
ABCA8-206ENST00000585850 ABCA10Q8WWZ4 1543 aa13.84□□□□□ -0.19
ABCA8-206ENST00000585850 TOPBP1Q92547 1522 aa13.84□□□□□ -0.19
ABCA8-206ENST00000585850 WDR97A6NE52 1622 aa13.83□□□□□ -0.2
ABCA8-206ENST00000585850 CTTNBP2Q8WZ74 1663 aa13.82□□□□□ -0.2
ABCA8-206ENST00000585850 TIAM1Q13009 1591 aa13.82□□□□□ -0.2
ABCA8-206ENST00000585850 DIEXFQ68CQ4 756 aaKnown RBP13.82□□□□□ -0.2
ABCA8-206ENST00000585850 NPM3O75607 178 aaKnown RBP13.81□□□□□ -0.2
ABCA8-206ENST00000585850 CFAP43Q8NDM7 1665 aa13.8□□□□□ -0.2
ABCA8-206ENST00000585850 ZNF316A6NFI3 1004 aaPredicted RBP13.8□□□□□ -0.2
ABCA8-206ENST00000585850 CLSPNQ9HAW4 1339 aa13.8□□□□□ -0.2
ABCA8-206ENST00000585850 POLA1P09884 1462 aaPredicted RBP13.8□□□□□ -0.2
ABCA8-206ENST00000585850 KANK4Q5T7N3 995 aaPredicted RBP13.8□□□□□ -0.2
ABCA8-206ENST00000585850 NESP48681 1621 aa13.78□□□□□ -0.2
ABCA8-206ENST00000585850 EFCAB5A4FU69 1503 aa13.76□□□□□ -0.21
ABCA8-206ENST00000585850 RAD54L2Q9Y4B4 1467 aa13.76□□□□□ -0.21
ABCA8-206ENST00000585850 FHAD1B1AJZ9 1412 aa13.76□□□□□ -0.21
ABCA8-206ENST00000585850 CCNB3Q8WWL7 1395 aa13.74□□□□□ -0.21
ABCA8-206ENST00000585850 PCF11O94913 1555 aaKnown RBP13.73□□□□□ -0.21
ABCA8-206ENST00000585850 ABCA5Q8WWZ7 1642 aa13.73□□□□□ -0.21
ABCA8-206ENST00000585850 DHX57Q6P158 1386 aaKnown RBP13.72□□□□□ -0.21
ABCA8-206ENST00000585850 URB2Q14146 1524 aaKnown RBP13.72□□□□□ -0.21
ABCA8-206ENST00000585850 LRRC9Q6ZRR7 1453 aa13.71□□□□□ -0.21
ABCA8-206ENST00000585850 KIF21AQ7Z4S6 1674 aa13.7□□□□□ -0.22
ABCA8-206ENST00000585850 AQRO60306 1485 aaKnown RBP eCLIP13.7□□□□□ -0.22
ABCA8-206ENST00000585850 FYCO1Q9BQS8 1478 aa13.69□□□□□ -0.22
ABCA8-206ENST00000585850 PDS5BQ9NTI5 1447 aa13.68□□□□□ -0.22
ABCA8-206ENST00000585850 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.67□□□□□ -0.22
ABCA8-206ENST00000585850 CASKIN1Q8WXD9 1431 aa13.64□□□□□ -0.23
ABCA8-206ENST00000585850 ACIN1Q9UKV3 1341 aaKnown RBP13.64□□□□□ -0.23
ABCA8-206ENST00000585850 SAMD9Q5K651 1589 aa13.64□□□□□ -0.23
ABCA8-206ENST00000585850 CENPBP07199 599 aaPredicted RBP13.64□□□□□ -0.23
ABCA8-206ENST00000585850 GAPVD1Q14C86 1478 aa13.62□□□□□ -0.23
ABCA8-206ENST00000585850 FHOD3Q2V2M9 1422 aa13.62□□□□□ -0.23
ABCA8-206ENST00000585850 TARBP1Q13395 1621 aaKnown RBP13.62□□□□□ -0.23
ABCA8-206ENST00000585850 PBRM1Q86U86 1689 aa13.61□□□□□ -0.23
ABCA8-206ENST00000585850 FMN1Q68DA7 1419 aa13.61□□□□□ -0.23
ABCA8-206ENST00000585850 PHLDB1Q86UU1 1377 aa13.59□□□□□ -0.23
ABCA8-206ENST00000585850 THOC2Q8NI27 1593 aaKnown RBP13.58□□□□□ -0.23
ABCA8-206ENST00000585850 LRRIQ1Q96JM4 1722 aa13.58□□□□□ -0.24
ABCA8-206ENST00000585850 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.58□□□□□ -0.24
ABCA8-206ENST00000585850 SNAPC4Q5SXM2 1469 aa13.57□□□□□ -0.24
ABCA8-206ENST00000585850 SETD5Q9C0A6 1442 aa13.57□□□□□ -0.24
ABCA8-206ENST00000585850 NEUROD1Q13562 356 aa13.57□□□□□ -0.24
ABCA8-206ENST00000585850 RAB3GAP2Q9H2M9 1393 aa13.57□□□□□ -0.24
ABCA8-206ENST00000585850 KCNA4P22459 653 aa13.56□□□□□ -0.24
ABCA8-206ENST00000585850 P3H3Q8IVL6 736 aa13.56□□□□□ -0.24
ABCA8-206ENST00000585850 TDRD9Q8NDG6 1382 aaKnown RBP13.55□□□□□ -0.24
ABCA8-206ENST00000585850 MAPKBP1O60336 1514 aa13.54□□□□□ -0.24
ABCA8-206ENST00000585850 ITGAEP38570 1179 aa13.53□□□□□ -0.24
ABCA8-206ENST00000585850 SUPT6HQ7KZ85 1726 aaKnown RBP13.51□□□□□ -0.25
ABCA8-206ENST00000585850 GRIN2BQ13224 1484 aa13.51□□□□□ -0.25
ABCA8-206ENST00000585850 ADAMTS12P58397 1594 aa13.5□□□□□ -0.25
ABCA8-206ENST00000585850 MIER1Q8N108 512 aa13.5□□□□□ -0.25
ABCA8-206ENST00000585850 ATP1B4Q9UN42 357 aaPredicted RBP13.5□□□□□ -0.25
ABCA8-206ENST00000585850 MRC2Q9UBG0 1479 aa13.49□□□□□ -0.25
ABCA8-206ENST00000585850 EHBP1L1Q8N3D4 1523 aa13.49□□□□□ -0.25
ABCA8-206ENST00000585850 FAM50AQ14320 339 aaKnown RBP13.49□□□□□ -0.25
ABCA8-206ENST00000585850 FGD6Q6ZV73 1430 aa13.48□□□□□ -0.25
ABCA8-206ENST00000585850 IQGAP2Q13576 1575 aa13.47□□□□□ -0.25
ABCA8-206ENST00000585850 U3KPZ7 1027 aaPredicted RBP13.46□□□□□ -0.25
ABCA8-206ENST00000585850 MTUS2Q5JR59 1369 aa13.46□□□□□ -0.25
ABCA8-206ENST00000585850 CCDC18Q5T9S5 1454 aa13.46□□□□□ -0.26
ABCA8-206ENST00000585850 HECW1Q76N89 1606 aa13.45□□□□□ -0.26
ABCA8-206ENST00000585850 NCOA2Q15596 1464 aa13.43□□□□□ -0.26
ABCA8-206ENST00000585850 ARHGEF11O15085 1522 aa13.42□□□□□ -0.26
ABCA8-206ENST00000585850 UGGT2Q9NYU1 1516 aa13.42□□□□□ -0.26
ABCA8-206ENST00000585850 MYOM3Q5VTT5 1437 aa13.42□□□□□ -0.26
ABCA8-206ENST00000585850 GTF3C3Q9Y5Q9 886 aa13.42□□□□□ -0.26
ABCA8-206ENST00000585850 PTPN23Q9H3S7 1636 aa13.42□□□□□ -0.26
ABCA8-206ENST00000585850 WDR62O43379 1518 aa13.41□□□□□ -0.26
ABCA8-206ENST00000585850 IFT140Q96RY7 1462 aa13.41□□□□□ -0.26
ABCA8-206ENST00000585850 TIMELESSQ9UNS1 1208 aa13.41□□□□□ -0.26
ABCA8-206ENST00000585850 PELP1Q8IZL8 1130 aaKnown RBP13.4□□□□□ -0.26
ABCA8-206ENST00000585850 GCC2Q8IWJ2 1684 aa13.38□□□□□ -0.27
ABCA8-206ENST00000585850 HFM1A2PYH4 1435 aa13.38□□□□□ -0.27
ABCA8-206ENST00000585850 MAGI3Q5TCQ9 1506 aa13.37□□□□□ -0.27
ABCA8-206ENST00000585850 TCOF1Q13428 1488 aaKnown RBP13.36□□□□□ -0.27
ABCA8-206ENST00000585850 YTHDC1Q96MU7 727 aaKnown RBP13.36□□□□□ -0.27
ABCA8-206ENST00000585850 EPRSP07814 1512 aaKnown RBP13.34□□□□□ -0.27
ABCA8-206ENST00000585850 PTPRKQ15262 1439 aa13.34□□□□□ -0.27
ABCA8-206ENST00000585850 UACAQ9BZF9 1416 aa13.34□□□□□ -0.27
ABCA8-206ENST00000585850 EIF4G3O43432 1585 aaKnown RBP13.33□□□□□ -0.27
ABCA8-206ENST00000585850 KIAA0556O60303 1618 aa13.33□□□□□ -0.28
ABCA8-206ENST00000585850 KIAA0586Q9BVV6 1533 aa13.32□□□□□ -0.28
ABCA8-206ENST00000585850 ZNF608Q9ULD9 1512 aaPredicted RBP13.32□□□□□ -0.28
ABCA8-206ENST00000585850 NAIPQ13075 1403 aa13.32□□□□□ -0.28
ABCA8-206ENST00000585850 SIN3AQ96ST3 1273 aa13.31□□□□□ -0.28
ABCA8-206ENST00000585850 AKNAQ7Z591 1439 aa13.31□□□□□ -0.28
ABCA8-206ENST00000585850 MIA2Q96PC5 1412 aa13.3□□□□□ -0.28
ABCA8-206ENST00000585850 RAPGEF6Q8TEU7 1601 aa13.29□□□□□ -0.28
ABCA8-206ENST00000585850 CDK13Q14004 1512 aaKnown RBP13.29□□□□□ -0.28
ABCA8-206ENST00000585850 SPINK5Q9NQ38 1064 aaPredicted RBP13.28□□□□□ -0.28
ABCA8-206ENST00000585850 GRIN2AQ12879 1464 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms