RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 PRG4Q92954 1404 aaPredicted RBP32■■■□□ 2.71
ATG4D-203ENST00000585752 RUSC2Q8N2Y8 1516 aa31.98■■■□□ 2.71
ATG4D-203ENST00000585752 CARMIL1Q5VZK9 1371 aa31.93■■■□□ 2.7
ATG4D-203ENST00000585752 KIAA0586Q9BVV6 1533 aa31.88■■■□□ 2.69
ATG4D-203ENST00000585752 NPM1P06748 294 aaKnown RBP eCLIP31.77■■■□□ 2.68
ATG4D-203ENST00000585752 RAPGEF2Q9Y4G8 1499 aa31.68■■■□□ 2.66
ATG4D-203ENST00000585752 IQGAP2Q13576 1575 aa31.67■■■□□ 2.66
ATG4D-203ENST00000585752 CARMIL2Q6F5E8 1435 aa31.66■■■□□ 2.66
ATG4D-203ENST00000585752 TTBK1Q5TCY1 1321 aaPredicted RBP31.64■■■□□ 2.66
ATG4D-203ENST00000585752 PTPRGP23470 1445 aa31.58■■■□□ 2.65
ATG4D-203ENST00000585752 ADCY10Q96PN6 1610 aa31.56■■■□□ 2.64
ATG4D-203ENST00000585752 KIF13AQ9H1H9 1805 aa31.53■■■□□ 2.64
ATG4D-203ENST00000585752 TNIKQ9UKE5 1360 aa31.53■■■□□ 2.64
ATG4D-203ENST00000585752 CTTNBP2Q8WZ74 1663 aa31.48■■■□□ 2.63
ATG4D-203ENST00000585752 MAPKBP1O60336 1514 aa31.46■■■□□ 2.63
ATG4D-203ENST00000585752 FAM69CQ0P6D2 419 aa31.45■■■□□ 2.63
ATG4D-203ENST00000585752 UGGT2Q9NYU1 1516 aa31.4■■■□□ 2.62
ATG4D-203ENST00000585752 ABCC10Q5T3U5 1492 aa31.39■■■□□ 2.62
ATG4D-203ENST00000585752 DISP1Q96F81 1524 aa31.38■■■□□ 2.61
ATG4D-203ENST00000585752 KIAA0556O60303 1618 aa31.35■■■□□ 2.61
ATG4D-203ENST00000585752 PRXQ9BXM0 1461 aa31.33■■■□□ 2.61
ATG4D-203ENST00000585752 DIP2BQ9P265 1576 aa31.32■■■□□ 2.6
ATG4D-203ENST00000585752 UACAQ9BZF9 1416 aa31.32■■■□□ 2.6
ATG4D-203ENST00000585752 ABCC2Q92887 1545 aa31.31■■■□□ 2.6
ATG4D-203ENST00000585752 GOLGA3Q08378 1498 aa31.3■■■□□ 2.6
ATG4D-203ENST00000585752 FAM9AQ8IZU1 332 aaPredicted RBP31.3■■■□□ 2.6
ATG4D-203ENST00000585752 CSRNP3Q8WYN3 585 aa31.3■■■□□ 2.6
ATG4D-203ENST00000585752 TSPOAP1O95153 1857 aa31.28■■■□□ 2.6
ATG4D-203ENST00000585752 UHRF1BP1LA0JNW5 1464 aa31.27■■■□□ 2.6
ATG4D-203ENST00000585752 EEA1Q15075 1411 aa31.23■■■□□ 2.59
ATG4D-203ENST00000585752 PLB1Q6P1J6 1458 aa31.21■■■□□ 2.59
ATG4D-203ENST00000585752 ASXL2Q76L83 1435 aa31.18■■■□□ 2.58
ATG4D-203ENST00000585752 ZCCHC11Q5TAX3 1644 aaKnown RBP31.13■■■□□ 2.57
ATG4D-203ENST00000585752 AEBP2Q6ZN18 517 aaPredicted RBP31.13■■■□□ 2.57
ATG4D-203ENST00000585752 KDM5BQ9UGL1 1544 aa31.11■■■□□ 2.57
ATG4D-203ENST00000585752 KDM6BO15054 1643 aa31.07■■■□□ 2.56
ATG4D-203ENST00000585752 P3H3Q8IVL6 736 aa31.06■■■□□ 2.56
ATG4D-203ENST00000585752 GLI2P10070 1586 aa31.05■■■□□ 2.56
ATG4D-203ENST00000585752 CHIC1Q5VXU3 224 aa31.03■■■□□ 2.56
ATG4D-203ENST00000585752 RANGAP1P46060 587 aaPredicted RBP31■■■□□ 2.55
ATG4D-203ENST00000585752 ABCA8O94911 1581 aa30.99■■■□□ 2.55
ATG4D-203ENST00000585752 EPRSP07814 1512 aaKnown RBP30.98■■■□□ 2.55
ATG4D-203ENST00000585752 WDR7Q9Y4E6 1490 aa30.94■■■□□ 2.54
ATG4D-203ENST00000585752 KIF21BO75037 1637 aa30.92■■■□□ 2.54
ATG4D-203ENST00000585752 SAMD9Q5K651 1589 aa30.92■■■□□ 2.54
ATG4D-203ENST00000585752 MAP3K4Q9Y6R4 1608 aa30.91■■■□□ 2.54
ATG4D-203ENST00000585752 KCNH8Q96L42 1107 aa30.9■■■□□ 2.54
ATG4D-203ENST00000585752 PPRC1Q5VV67 1664 aaKnown RBP30.9■■■□□ 2.54
ATG4D-203ENST00000585752 TEX14Q8IWB6 1497 aa30.89■■■□□ 2.53
ATG4D-203ENST00000585752 ARID3CA6NKF2 412 aa30.86■■■□□ 2.53
ATG4D-203ENST00000585752 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.84■■■□□ 2.53
ATG4D-203ENST00000585752 HNRNPUL2Q1KMD3 747 aaKnown RBP30.84■■■□□ 2.53
ATG4D-203ENST00000585752 EHMT2Q96KQ7 1210 aa30.84■■■□□ 2.53
ATG4D-203ENST00000585752 UBTFP17480 764 aaKnown RBP30.83■■■□□ 2.53
ATG4D-203ENST00000585752 RAPGEF6Q8TEU7 1601 aa30.82■■■□□ 2.52
ATG4D-203ENST00000585752 CFAP43Q8NDM7 1665 aa30.81■■■□□ 2.52
ATG4D-203ENST00000585752 CD109Q6YHK3 1445 aa30.75■■■□□ 2.51
ATG4D-203ENST00000585752 ATP10BO94823 1461 aa30.75■■■□□ 2.51
ATG4D-203ENST00000585752 FHOD3Q2V2M9 1422 aa30.74■■■□□ 2.51
ATG4D-203ENST00000585752 EFCAB5A4FU69 1503 aa30.74■■■□□ 2.51
ATG4D-203ENST00000585752 MAGI3Q5TCQ9 1506 aa30.66■■■□□ 2.5
ATG4D-203ENST00000585752 NUP153P49790 1475 aaKnown RBP30.59■■■□□ 2.49
ATG4D-203ENST00000585752 PLEKHD1A6NEE1 506 aa30.59■■■□□ 2.49
ATG4D-203ENST00000585752 COL17A1Q9UMD9 1497 aaPredicted RBP30.58■■■□□ 2.49
ATG4D-203ENST00000585752 ABCA9Q8IUA7 1624 aa30.55■■■□□ 2.48
ATG4D-203ENST00000585752 ATP1B4Q9UN42 357 aaPredicted RBP30.55■■■□□ 2.48
ATG4D-203ENST00000585752 FMN1Q68DA7 1419 aa30.5■■■□□ 2.47
ATG4D-203ENST00000585752 KDM4FA0A1W2PPD8 638 aa30.49■■■□□ 2.47
ATG4D-203ENST00000585752 PHLDB1Q86UU1 1377 aa30.46■■■□□ 2.47
ATG4D-203ENST00000585752 HECW1Q76N89 1606 aa30.43■■■□□ 2.46
ATG4D-203ENST00000585752 ARHGAP35Q9NRY4 1499 aa30.43■■■□□ 2.46
ATG4D-203ENST00000585752 ARAP3Q8WWN8 1544 aa30.41■■■□□ 2.46
ATG4D-203ENST00000585752 CDK11AQ9UQ88 783 aaPredicted RBP30.39■■■□□ 2.46
ATG4D-203ENST00000585752 ADGRL1O94910 1474 aa30.38■■■□□ 2.45
ATG4D-203ENST00000585752 NEO1Q92859 1461 aa30.38■■■□□ 2.45
ATG4D-203ENST00000585752 CDK13Q14004 1512 aaKnown RBP30.37■■■□□ 2.45
ATG4D-203ENST00000585752 CFAP74Q9C0B2 1584 aa30.32■■■□□ 2.45
ATG4D-203ENST00000585752 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.31■■■□□ 2.44
ATG4D-203ENST00000585752 RAPGEF3O95398 923 aa30.27■■■□□ 2.44
ATG4D-203ENST00000585752 TTC37Q6PGP7 1564 aa30.25■■■□□ 2.43
ATG4D-203ENST00000585752 FANCAO15360 1455 aa30.25■■■□□ 2.43
ATG4D-203ENST00000585752 AKNAQ7Z591 1439 aa30.22■■■□□ 2.43
ATG4D-203ENST00000585752 CLIP1P30622 1438 aa30.21■■■□□ 2.43
ATG4D-203ENST00000585752 DENND4BO75064 1496 aaPredicted RBP30.19■■■□□ 2.42
ATG4D-203ENST00000585752 MYO5CQ9NQX4 1742 aa30.19■■■□□ 2.42
ATG4D-203ENST00000585752 KIF14Q15058 1648 aa30.18■■■□□ 2.42
ATG4D-203ENST00000585752 LRRIQ1Q96JM4 1722 aa30.16■■■□□ 2.42
ATG4D-203ENST00000585752 ARID4BQ4LE39 1312 aaPredicted RBP30.14■■■□□ 2.42
ATG4D-203ENST00000585752 PLCH2O75038 1416 aa30.13■■■□□ 2.41
ATG4D-203ENST00000585752 CCDC18Q5T9S5 1454 aa30.13■■■□□ 2.41
ATG4D-203ENST00000585752 PCF11O94913 1555 aaKnown RBP30.13■■■□□ 2.41
ATG4D-203ENST00000585752 RICTORQ6R327 1708 aa30.13■■■□□ 2.41
ATG4D-203ENST00000585752 TROQ12816 1431 aaPredicted RBP30.13■■■□□ 2.41
ATG4D-203ENST00000585752 CASKIN1Q8WXD9 1431 aa30.13■■■□□ 2.41
ATG4D-203ENST00000585752 FRMPD1Q5SYB0 1578 aa30.11■■■□□ 2.41
ATG4D-203ENST00000585752 EFCAB2Q5VUJ9 269 aa30.1■■■□□ 2.41
ATG4D-203ENST00000585752 FYCO1Q9BQS8 1478 aa30.05■■■□□ 2.4
ATG4D-203ENST00000585752 ARHGAP5Q13017 1502 aa30.04■■■□□ 2.4
ATG4D-203ENST00000585752 SCAPERQ9BY12 1400 aa30.04■■■□□ 2.4
ATG4D-203ENST00000585752 ARHGEF40Q8TER5 1519 aa30.01■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms