RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 AEBP2Q6ZN18 517 aaPredicted RBP36.29■■■■□ 3.4
SRSF1-206ENST00000583741 ADCY10Q96PN6 1610 aa36.07■■■■□ 3.37
SRSF1-206ENST00000583741 IGF1RP08069 1367 aa36.07■■■■□ 3.36
SRSF1-206ENST00000583741 CUL7Q14999 1698 aa36.06■■■■□ 3.36
SRSF1-206ENST00000583741 KIAA0586Q9BVV6 1533 aa36.05■■■■□ 3.36
SRSF1-206ENST00000583741 MAPKBP1O60336 1514 aa36.04■■■■□ 3.36
SRSF1-206ENST00000583741 ABCC10Q5T3U5 1492 aa36.03■■■■□ 3.36
SRSF1-206ENST00000583741 KIF27Q86VH2 1401 aa36.03■■■■□ 3.36
SRSF1-206ENST00000583741 DIP2BQ9P265 1576 aa35.98■■■■□ 3.35
SRSF1-206ENST00000583741 FAM69CQ0P6D2 419 aa35.97■■■■□ 3.35
SRSF1-206ENST00000583741 NPM1P06748 294 aaKnown RBP eCLIP35.95■■■■□ 3.35
SRSF1-206ENST00000583741 CARMIL1Q5VZK9 1371 aa35.8■■■■□ 3.32
SRSF1-206ENST00000583741 TSPOAP1O95153 1857 aa35.76■■■■□ 3.32
SRSF1-206ENST00000583741 PTPRGP23470 1445 aa35.75■■■■□ 3.31
SRSF1-206ENST00000583741 KDM6BO15054 1643 aa35.72■■■■□ 3.31
SRSF1-206ENST00000583741 IQGAP2Q13576 1575 aa35.7■■■■□ 3.31
SRSF1-206ENST00000583741 TTBK1Q5TCY1 1321 aaPredicted RBP35.68■■■■□ 3.3
SRSF1-206ENST00000583741 TNIKQ9UKE5 1360 aa35.67■■■■□ 3.3
SRSF1-206ENST00000583741 CARMIL2Q6F5E8 1435 aa35.66■■■■□ 3.3
SRSF1-206ENST00000583741 ABCC2Q92887 1545 aa35.64■■■■□ 3.3
SRSF1-206ENST00000583741 DISP1Q96F81 1524 aa35.56■■■■□ 3.28
SRSF1-206ENST00000583741 ASXL2Q76L83 1435 aa35.54■■■■□ 3.28
SRSF1-206ENST00000583741 UHRF1BP1LA0JNW5 1464 aa35.53■■■■□ 3.28
SRSF1-206ENST00000583741 PPRC1Q5VV67 1664 aaKnown RBP35.51■■■■□ 3.28
SRSF1-206ENST00000583741 PLB1Q6P1J6 1458 aa35.49■■■■□ 3.27
SRSF1-206ENST00000583741 GLI2P10070 1586 aa35.48■■■■□ 3.27
SRSF1-206ENST00000583741 UACAQ9BZF9 1416 aa35.48■■■■□ 3.27
SRSF1-206ENST00000583741 RAPGEF2Q9Y4G8 1499 aa35.47■■■■□ 3.27
SRSF1-206ENST00000583741 KDM4FA0A1W2PPD8 638 aa35.47■■■■□ 3.27
SRSF1-206ENST00000583741 UGGT2Q9NYU1 1516 aa35.45■■■■□ 3.27
SRSF1-206ENST00000583741 KIAA0556O60303 1618 aa35.4■■■■□ 3.26
SRSF1-206ENST00000583741 KDM5BQ9UGL1 1544 aa35.39■■■■□ 3.26
SRSF1-206ENST00000583741 ZCCHC11Q5TAX3 1644 aaKnown RBP35.36■■■■□ 3.25
SRSF1-206ENST00000583741 EPRSP07814 1512 aaKnown RBP35.34■■■■□ 3.25
SRSF1-206ENST00000583741 MAP3K4Q9Y6R4 1608 aa35.32■■■■□ 3.25
SRSF1-206ENST00000583741 CTTNBP2Q8WZ74 1663 aa35.27■■■■□ 3.24
SRSF1-206ENST00000583741 COL17A1Q9UMD9 1497 aaPredicted RBP35.25■■■■□ 3.23
SRSF1-206ENST00000583741 TEX14Q8IWB6 1497 aa35.17■■■■□ 3.22
SRSF1-206ENST00000583741 WDR7Q9Y4E6 1490 aa35.15■■■■□ 3.22
SRSF1-206ENST00000583741 ADGRL1O94910 1474 aa35.14■■■■□ 3.22
SRSF1-206ENST00000583741 GOLGA3Q08378 1498 aa35.09■■■■□ 3.21
SRSF1-206ENST00000583741 ABCA8O94911 1581 aa35.09■■■■□ 3.21
SRSF1-206ENST00000583741 PRXQ9BXM0 1461 aa35.05■■■■□ 3.2
SRSF1-206ENST00000583741 CFAP43Q8NDM7 1665 aa35■■■■□ 3.19
SRSF1-206ENST00000583741 CD109Q6YHK3 1445 aa34.94■■■■□ 3.18
SRSF1-206ENST00000583741 MAGI3Q5TCQ9 1506 aa34.94■■■■□ 3.18
SRSF1-206ENST00000583741 KCNH8Q96L42 1107 aa34.91■■■■□ 3.18
SRSF1-206ENST00000583741 HECW2Q9P2P5 1572 aa34.78■■■■□ 3.16
SRSF1-206ENST00000583741 ARID3CA6NKF2 412 aa34.78■■■■□ 3.16
SRSF1-206ENST00000583741 P3H3Q8IVL6 736 aa34.77■■■■□ 3.16
SRSF1-206ENST00000583741 ATP10BO94823 1461 aa34.76■■■■□ 3.15
SRSF1-206ENST00000583741 SAMD9Q5K651 1589 aa34.74■■■■□ 3.15
SRSF1-206ENST00000583741 KIF21BO75037 1637 aa34.72■■■■□ 3.15
SRSF1-206ENST00000583741 ARAP3Q8WWN8 1544 aa34.69■■■■□ 3.14
SRSF1-206ENST00000583741 ABCA9Q8IUA7 1624 aa34.68■■■■□ 3.14
SRSF1-206ENST00000583741 ILDR1Q86SU0 546 aaPredicted RBP34.66■■■■□ 3.14
SRSF1-206ENST00000583741 RAPGEF6Q8TEU7 1601 aa34.65■■■■□ 3.14
SRSF1-206ENST00000583741 CSRNP3Q8WYN3 585 aa34.64■■■■□ 3.14
SRSF1-206ENST00000583741 FAM9AQ8IZU1 332 aaPredicted RBP34.62■■■■□ 3.13
SRSF1-206ENST00000583741 NUP153P49790 1475 aaKnown RBP34.53■■■■□ 3.12
SRSF1-206ENST00000583741 PHLDB1Q86UU1 1377 aa34.51■■■■□ 3.11
SRSF1-206ENST00000583741 NEO1Q92859 1461 aa34.48■■■■□ 3.11
SRSF1-206ENST00000583741 FHOD3Q2V2M9 1422 aa34.47■■■■□ 3.11
SRSF1-206ENST00000583741 RAPGEF3O95398 923 aa34.46■■■■□ 3.11
SRSF1-206ENST00000583741 FRMPD1Q5SYB0 1578 aa34.46■■■■□ 3.11
SRSF1-206ENST00000583741 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.46■■■■□ 3.11
SRSF1-206ENST00000583741 HNRNPUL2Q1KMD3 747 aaKnown RBP34.46■■■■□ 3.11
SRSF1-206ENST00000583741 RANGAP1P46060 587 aaPredicted RBP34.45■■■■□ 3.1
SRSF1-206ENST00000583741 EEA1Q15075 1411 aa34.44■■■■□ 3.1
SRSF1-206ENST00000583741 ADAMTSL3P82987 1691 aa34.43■■■■□ 3.1
SRSF1-206ENST00000583741 PTPRMP28827 1452 aa34.36■■■■□ 3.09
SRSF1-206ENST00000583741 BCORL1Q5H9F3 1711 aa34.33■■■■□ 3.09
SRSF1-206ENST00000583741 EFCAB5A4FU69 1503 aa34.29■■■■□ 3.08
SRSF1-206ENST00000583741 RICTORQ6R327 1708 aa34.29■■■■□ 3.08
SRSF1-206ENST00000583741 MADDQ8WXG6 1647 aa34.28■■■■□ 3.08
SRSF1-206ENST00000583741 ARHGEF40Q8TER5 1519 aa34.27■■■■□ 3.08
SRSF1-206ENST00000583741 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.26■■■■□ 3.084e-20■□□□□ 9.3
SRSF1-206ENST00000583741 PLEKHD1A6NEE1 506 aa34.26■■■■□ 3.07
SRSF1-206ENST00000583741 TTC37Q6PGP7 1564 aa34.25■■■■□ 3.07
SRSF1-206ENST00000583741 FANCAO15360 1455 aa34.23■■■■□ 3.07
SRSF1-206ENST00000583741 DENND4BO75064 1496 aaPredicted RBP34.22■■■■□ 3.07
SRSF1-206ENST00000583741 CFAP74Q9C0B2 1584 aa34.22■■■■□ 3.07
SRSF1-206ENST00000583741 AKNAQ7Z591 1439 aa34.22■■■■□ 3.07
SRSF1-206ENST00000583741 ARID4BQ4LE39 1312 aaPredicted RBP34.2■■■■□ 3.07
SRSF1-206ENST00000583741 CDK13Q14004 1512 aaKnown RBP34.18■■■■□ 3.06
SRSF1-206ENST00000583741 RIMS1Q86UR5 1692 aaKnown RBP34.14■■■■□ 3.06
SRSF1-206ENST00000583741 ZMYM4Q5VZL5 1548 aa34.13■■■■□ 3.05
SRSF1-206ENST00000583741 PCF11O94913 1555 aaKnown RBP34.12■■■■□ 3.05
SRSF1-206ENST00000583741 SIGLEC1Q9BZZ2 1709 aa34.12■■■■□ 3.05
SRSF1-206ENST00000583741 LMTK3Q96Q04 1460 aa34.09■■■■□ 3.05
SRSF1-206ENST00000583741 ZFYVE16Q7Z3T8 1539 aa34.07■■■■□ 3.04
SRSF1-206ENST00000583741 YEATS2Q9ULM3 1422 aa34.06■■■■□ 3.04
SRSF1-206ENST00000583741 HECW1Q76N89 1606 aa34.03■■■■□ 3.04
SRSF1-206ENST00000583741 EHMT2Q96KQ7 1210 aa34■■■■□ 3.03
SRSF1-206ENST00000583741 PLCH2O75038 1416 aa33.99■■■■□ 3.03
SRSF1-206ENST00000583741 MAGI2Q86UL8 1455 aa33.99■■■■□ 3.03
SRSF1-206ENST00000583741 POGZQ7Z3K3 1410 aa33.98■■■■□ 3.03
SRSF1-206ENST00000583741 ARHGAP35Q9NRY4 1499 aa33.97■■■■□ 3.03
SRSF1-206ENST00000583741 SCAPERQ9BY12 1400 aa33.96■■■■□ 3.03
SRSF1-206ENST00000583741 FBXO41Q8TF61 875 aa33.95■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms