RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 KIF27Q86VH2 1401 aa16.97■□□□□ 0.31
CDK5RAP3-227ENST00000583352 KIF13AQ9H1H9 1805 aa16.97■□□□□ 0.31
CDK5RAP3-227ENST00000583352 NPM1P06748 294 aaKnown RBP eCLIP16.96■□□□□ 0.31
CDK5RAP3-227ENST00000583352 IGF1RP08069 1367 aa16.96■□□□□ 0.31
CDK5RAP3-227ENST00000583352 CUL7Q14999 1698 aa16.95■□□□□ 0.3
CDK5RAP3-227ENST00000583352 KIAA0586Q9BVV6 1533 aa16.95■□□□□ 0.3
CDK5RAP3-227ENST00000583352 MAPKBP1O60336 1514 aa16.91■□□□□ 0.3
CDK5RAP3-227ENST00000583352 ABCC10Q5T3U5 1492 aa16.9■□□□□ 0.3
CDK5RAP3-227ENST00000583352 FAM69CQ0P6D2 419 aa16.89■□□□□ 0.29
CDK5RAP3-227ENST00000583352 ADCY10Q96PN6 1610 aa16.88■□□□□ 0.29
CDK5RAP3-227ENST00000583352 CARMIL1Q5VZK9 1371 aa16.86■□□□□ 0.29
CDK5RAP3-227ENST00000583352 DIP2BQ9P265 1576 aa16.85■□□□□ 0.29
CDK5RAP3-227ENST00000583352 PTPRGP23470 1445 aa16.82■□□□□ 0.28
CDK5RAP3-227ENST00000583352 CARMIL2Q6F5E8 1435 aa16.8■□□□□ 0.28
CDK5RAP3-227ENST00000583352 TNIKQ9UKE5 1360 aa16.78■□□□□ 0.28
CDK5RAP3-227ENST00000583352 IQGAP2Q13576 1575 aa16.77■□□□□ 0.28
CDK5RAP3-227ENST00000583352 TTBK1Q5TCY1 1321 aaPredicted RBP16.77■□□□□ 0.28
CDK5RAP3-227ENST00000583352 KDM6BO15054 1643 aa16.74■□□□□ 0.27
CDK5RAP3-227ENST00000583352 ABCC2Q92887 1545 aa16.73■□□□□ 0.27
CDK5RAP3-227ENST00000583352 TSPOAP1O95153 1857 aa16.73■□□□□ 0.27
CDK5RAP3-227ENST00000583352 RAPGEF2Q9Y4G8 1499 aa16.7■□□□□ 0.26
CDK5RAP3-227ENST00000583352 UHRF1BP1LA0JNW5 1464 aa16.69■□□□□ 0.26
CDK5RAP3-227ENST00000583352 PLB1Q6P1J6 1458 aa16.69■□□□□ 0.26
CDK5RAP3-227ENST00000583352 DISP1Q96F81 1524 aa16.69■□□□□ 0.26
CDK5RAP3-227ENST00000583352 ASXL2Q76L83 1435 aa16.69■□□□□ 0.26
CDK5RAP3-227ENST00000583352 UACAQ9BZF9 1416 aa16.69■□□□□ 0.26
CDK5RAP3-227ENST00000583352 UGGT2Q9NYU1 1516 aa16.65■□□□□ 0.26
CDK5RAP3-227ENST00000583352 GLI2P10070 1586 aa16.65■□□□□ 0.26
CDK5RAP3-227ENST00000583352 KIAA0556O60303 1618 aa16.63■□□□□ 0.25
CDK5RAP3-227ENST00000583352 KDM5BQ9UGL1 1544 aa16.61■□□□□ 0.25
CDK5RAP3-227ENST00000583352 PPRC1Q5VV67 1664 aaKnown RBP16.6■□□□□ 0.25
CDK5RAP3-227ENST00000583352 KDM4FA0A1W2PPD8 638 aa16.58■□□□□ 0.24
CDK5RAP3-227ENST00000583352 EPRSP07814 1512 aaKnown RBP16.58■□□□□ 0.24
CDK5RAP3-227ENST00000583352 ZCCHC11Q5TAX3 1644 aaKnown RBP16.58■□□□□ 0.24
CDK5RAP3-227ENST00000583352 CTTNBP2Q8WZ74 1663 aa16.56■□□□□ 0.24
CDK5RAP3-227ENST00000583352 MAP3K4Q9Y6R4 1608 aa16.55■□□□□ 0.24
CDK5RAP3-227ENST00000583352 GOLGA3Q08378 1498 aa16.54■□□□□ 0.24
CDK5RAP3-227ENST00000583352 TEX14Q8IWB6 1497 aa16.54■□□□□ 0.24
CDK5RAP3-227ENST00000583352 WDR7Q9Y4E6 1490 aa16.51■□□□□ 0.23
CDK5RAP3-227ENST00000583352 PRXQ9BXM0 1461 aa16.49■□□□□ 0.23
CDK5RAP3-227ENST00000583352 COL17A1Q9UMD9 1497 aaPredicted RBP16.49■□□□□ 0.23
CDK5RAP3-227ENST00000583352 ABCA8O94911 1581 aa16.47■□□□□ 0.23
CDK5RAP3-227ENST00000583352 ADGRL1O94910 1474 aa16.46■□□□□ 0.23
CDK5RAP3-227ENST00000583352 FAM9AQ8IZU1 332 aaPredicted RBP16.44■□□□□ 0.22
CDK5RAP3-227ENST00000583352 CFAP43Q8NDM7 1665 aa16.43■□□□□ 0.22
CDK5RAP3-227ENST00000583352 KCNH8Q96L42 1107 aa16.42■□□□□ 0.22
CDK5RAP3-227ENST00000583352 CD109Q6YHK3 1445 aa16.42■□□□□ 0.22
CDK5RAP3-227ENST00000583352 MAGI3Q5TCQ9 1506 aa16.41■□□□□ 0.22
CDK5RAP3-227ENST00000583352 P3H3Q8IVL6 736 aa16.36■□□□□ 0.21
CDK5RAP3-227ENST00000583352 CSRNP3Q8WYN3 585 aa16.35■□□□□ 0.21
CDK5RAP3-227ENST00000583352 ARID3CA6NKF2 412 aa16.34■□□□□ 0.21
CDK5RAP3-227ENST00000583352 ATP10BO94823 1461 aa16.33■□□□□ 0.2
CDK5RAP3-227ENST00000583352 SAMD9Q5K651 1589 aa16.32■□□□□ 0.2
CDK5RAP3-227ENST00000583352 RAPGEF6Q8TEU7 1601 aa16.29■□□□□ 0.2
CDK5RAP3-227ENST00000583352 EEA1Q15075 1411 aa16.28■□□□□ 0.2
CDK5RAP3-227ENST00000583352 ARAP3Q8WWN8 1544 aa16.28■□□□□ 0.2
CDK5RAP3-227ENST00000583352 ABCA9Q8IUA7 1624 aa16.27■□□□□ 0.2
CDK5RAP3-227ENST00000583352 PHLDB1Q86UU1 1377 aa16.26■□□□□ 0.19
CDK5RAP3-227ENST00000583352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.26■□□□□ 0.19
CDK5RAP3-227ENST00000583352 HNRNPUL2Q1KMD3 747 aaKnown RBP16.26■□□□□ 0.19
CDK5RAP3-227ENST00000583352 HECW2Q9P2P5 1572 aa16.26■□□□□ 0.19
CDK5RAP3-227ENST00000583352 KIF21BO75037 1637 aa16.25■□□□□ 0.19
CDK5RAP3-227ENST00000583352 RANGAP1P46060 587 aaPredicted RBP16.23■□□□□ 0.19
CDK5RAP3-227ENST00000583352 NEO1Q92859 1461 aa16.22■□□□□ 0.19
CDK5RAP3-227ENST00000583352 FHOD3Q2V2M9 1422 aa16.21■□□□□ 0.19
CDK5RAP3-227ENST00000583352 NUP153P49790 1475 aaKnown RBP16.21■□□□□ 0.19
CDK5RAP3-227ENST00000583352 ILDR1Q86SU0 546 aaPredicted RBP16.18■□□□□ 0.18
CDK5RAP3-227ENST00000583352 PLEKHD1A6NEE1 506 aa16.17■□□□□ 0.18
CDK5RAP3-227ENST00000583352 RAPGEF3O95398 923 aa16.17■□□□□ 0.18
CDK5RAP3-227ENST00000583352 EFCAB5A4FU69 1503 aa16.15■□□□□ 0.18
CDK5RAP3-227ENST00000583352 FRMPD1Q5SYB0 1578 aa16.13■□□□□ 0.17
CDK5RAP3-227ENST00000583352 ADAMTSL3P82987 1691 aa16.12■□□□□ 0.17
CDK5RAP3-227ENST00000583352 PTPRMP28827 1452 aa16.1■□□□□ 0.17
CDK5RAP3-227ENST00000583352 ARID4BQ4LE39 1312 aaPredicted RBP16.1■□□□□ 0.17
CDK5RAP3-227ENST00000583352 DENND4BO75064 1496 aaPredicted RBP16.1■□□□□ 0.17
CDK5RAP3-227ENST00000583352 CFAP74Q9C0B2 1584 aa16.09■□□□□ 0.17
CDK5RAP3-227ENST00000583352 AKNAQ7Z591 1439 aa16.09■□□□□ 0.17
CDK5RAP3-227ENST00000583352 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.09■□□□□ 0.17
CDK5RAP3-227ENST00000583352 BCORL1Q5H9F3 1711 aa16.08■□□□□ 0.17
CDK5RAP3-227ENST00000583352 FANCAO15360 1455 aa16.08■□□□□ 0.16
CDK5RAP3-227ENST00000583352 ARHGEF40Q8TER5 1519 aa16.07■□□□□ 0.16
CDK5RAP3-227ENST00000583352 RICTORQ6R327 1708 aa16.06■□□□□ 0.16
CDK5RAP3-227ENST00000583352 TTC37Q6PGP7 1564 aa16.06■□□□□ 0.16
CDK5RAP3-227ENST00000583352 MADDQ8WXG6 1647 aa16.05■□□□□ 0.16
CDK5RAP3-227ENST00000583352 CDK13Q14004 1512 aaKnown RBP16.04■□□□□ 0.16
CDK5RAP3-227ENST00000583352 UBTFP17480 764 aaKnown RBP16.04■□□□□ 0.16
CDK5RAP3-227ENST00000583352 EHMT2Q96KQ7 1210 aa16.02■□□□□ 0.16
CDK5RAP3-227ENST00000583352 ZMYM4Q5VZL5 1548 aa16.02■□□□□ 0.15
CDK5RAP3-227ENST00000583352 FMN1Q68DA7 1419 aa16.02■□□□□ 0.15
CDK5RAP3-227ENST00000583352 HECW1Q76N89 1606 aa16.01■□□□□ 0.15
CDK5RAP3-227ENST00000583352 ZFYVE16Q7Z3T8 1539 aa16■□□□□ 0.15
CDK5RAP3-227ENST00000583352 ATP1B4Q9UN42 357 aaPredicted RBP16■□□□□ 0.15
CDK5RAP3-227ENST00000583352 POGZQ7Z3K3 1410 aa16■□□□□ 0.15
CDK5RAP3-227ENST00000583352 RIMS1Q86UR5 1692 aaKnown RBP15.99■□□□□ 0.15
CDK5RAP3-227ENST00000583352 MAGI2Q86UL8 1455 aa15.99■□□□□ 0.15
CDK5RAP3-227ENST00000583352 PLCH2O75038 1416 aa15.99■□□□□ 0.15
CDK5RAP3-227ENST00000583352 PCF11O94913 1555 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP3-227ENST00000583352 CDK11AQ9UQ88 783 aaPredicted RBP15.98■□□□□ 0.15
CDK5RAP3-227ENST00000583352 ARHGAP35Q9NRY4 1499 aa15.97■□□□□ 0.15
CDK5RAP3-227ENST00000583352 SCAPERQ9BY12 1400 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms