RNA–Protein interactions for RNA: ENST00000583206.1

TVP23C-209, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-209ENST00000583206 ERICH3Q5RHP9 1530 aa17.2■□□□□ 0.34
TVP23C-209ENST00000583206 MAPKBP1O60336 1514 aa17.19■□□□□ 0.34
TVP23C-209ENST00000583206 DIP2BQ9P265 1576 aa17.16■□□□□ 0.34
TVP23C-209ENST00000583206 NPM1P06748 294 aaKnown RBP eCLIP17.15■□□□□ 0.34
TVP23C-209ENST00000583206 TOP2BQ02880 1626 aa17.14■□□□□ 0.33
TVP23C-209ENST00000583206 BIVM-ERCC5R4GMW8 1640 aa17.13■□□□□ 0.33
TVP23C-209ENST00000583206 ADCY10Q96PN6 1610 aa17.11■□□□□ 0.33
TVP23C-209ENST00000583206 KDM6BO15054 1643 aa17.09■□□□□ 0.33
TVP23C-209ENST00000583206 RUSC2Q8N2Y8 1516 aa17.08■□□□□ 0.32
TVP23C-209ENST00000583206 KIAA0586Q9BVV6 1533 aa17.01■□□□□ 0.31
TVP23C-209ENST00000583206 TSPOAP1O95153 1857 aa16.99■□□□□ 0.31
TVP23C-209ENST00000583206 SUPT5HO00267 1087 aaKnown RBP16.98■□□□□ 0.31
TVP23C-209ENST00000583206 IGF1RP08069 1367 aa16.98■□□□□ 0.31
TVP23C-209ENST00000583206 COL17A1Q9UMD9 1497 aaPredicted RBP16.95■□□□□ 0.3
TVP23C-209ENST00000583206 PTPRGP23470 1445 aa16.95■□□□□ 0.3
TVP23C-209ENST00000583206 ADGRL1O94910 1474 aa16.94■□□□□ 0.3
TVP23C-209ENST00000583206 PPRC1Q5VV67 1664 aaKnown RBP16.92■□□□□ 0.3
TVP23C-209ENST00000583206 ASXL2Q76L83 1435 aa16.91■□□□□ 0.3
TVP23C-209ENST00000583206 ABCC2Q92887 1545 aa16.91■□□□□ 0.3
TVP23C-209ENST00000583206 GLI2P10070 1586 aa16.9■□□□□ 0.3
TVP23C-209ENST00000583206 PLB1Q6P1J6 1458 aa16.87■□□□□ 0.29
TVP23C-209ENST00000583206 TNIKQ9UKE5 1360 aa16.87■□□□□ 0.29
TVP23C-209ENST00000583206 TTBK1Q5TCY1 1321 aaPredicted RBP16.85■□□□□ 0.29
TVP23C-209ENST00000583206 UHRF1BP1LA0JNW5 1464 aa16.84■□□□□ 0.29
TVP23C-209ENST00000583206 HECW2Q9P2P5 1572 aa16.84■□□□□ 0.29
TVP23C-209ENST00000583206 KIF27Q86VH2 1401 aa16.82■□□□□ 0.28
TVP23C-209ENST00000583206 EPRSP07814 1512 aaKnown RBP16.8■□□□□ 0.28
TVP23C-209ENST00000583206 CARMIL1Q5VZK9 1371 aa16.8■□□□□ 0.28
TVP23C-209ENST00000583206 CARMIL2Q6F5E8 1435 aa16.79■□□□□ 0.28
TVP23C-209ENST00000583206 UACAQ9BZF9 1416 aa16.79■□□□□ 0.28
TVP23C-209ENST00000583206 CUL7Q14999 1698 aa16.78■□□□□ 0.28
TVP23C-209ENST00000583206 KDM5BQ9UGL1 1544 aa16.78■□□□□ 0.28
TVP23C-209ENST00000583206 MAP3K4Q9Y6R4 1608 aa16.77■□□□□ 0.27
TVP23C-209ENST00000583206 DISP1Q96F81 1524 aa16.75■□□□□ 0.27
TVP23C-209ENST00000583206 TEX14Q8IWB6 1497 aa16.72■□□□□ 0.27
TVP23C-209ENST00000583206 IQGAP2Q13576 1575 aa16.7■□□□□ 0.26
TVP23C-209ENST00000583206 FBXO41Q8TF61 875 aa16.69■□□□□ 0.26
TVP23C-209ENST00000583206 ZCCHC11Q5TAX3 1644 aaKnown RBP16.65■□□□□ 0.26
TVP23C-209ENST00000583206 UGGT2Q9NYU1 1516 aa16.65■□□□□ 0.26
TVP23C-209ENST00000583206 WDR7Q9Y4E6 1490 aa16.63■□□□□ 0.25
TVP23C-209ENST00000583206 MAGI3Q5TCQ9 1506 aa16.62■□□□□ 0.25
TVP23C-209ENST00000583206 CD109Q6YHK3 1445 aa16.62■□□□□ 0.25
TVP23C-209ENST00000583206 KIAA0556O60303 1618 aa16.57■□□□□ 0.24
TVP23C-209ENST00000583206 KCNH8Q96L42 1107 aa16.57■□□□□ 0.24
TVP23C-209ENST00000583206 RAPGEF2Q9Y4G8 1499 aa16.54■□□□□ 0.24
TVP23C-209ENST00000583206 ARAP3Q8WWN8 1544 aa16.52■□□□□ 0.24
TVP23C-209ENST00000583206 CFAP43Q8NDM7 1665 aa16.51■□□□□ 0.23
TVP23C-209ENST00000583206 PTPRMP28827 1452 aa16.51■□□□□ 0.23
TVP23C-209ENST00000583206 KIF21BO75037 1637 aa16.51■□□□□ 0.23
TVP23C-209ENST00000583206 ABCA8O94911 1581 aa16.5■□□□□ 0.23
TVP23C-209ENST00000583206 ADAMTSL3P82987 1691 aa16.48■□□□□ 0.23
TVP23C-209ENST00000583206 RAPGEF3O95398 923 aa16.44■□□□□ 0.22
TVP23C-209ENST00000583206 PHLDB1Q86UU1 1377 aa16.42■□□□□ 0.22
TVP23C-209ENST00000583206 LMTK3Q96Q04 1460 aa16.42■□□□□ 0.22
TVP23C-209ENST00000583206 ATP10BO94823 1461 aa16.41■□□□□ 0.22
TVP23C-209ENST00000583206 GOLGA3Q08378 1498 aa16.41■□□□□ 0.22
TVP23C-209ENST00000583206 PCF11O94913 1555 aaKnown RBP16.39■□□□□ 0.21
TVP23C-209ENST00000583206 ARID3CA6NKF2 412 aa16.36■□□□□ 0.21
TVP23C-209ENST00000583206 BCORL1Q5H9F3 1711 aa16.35■□□□□ 0.21
TVP23C-209ENST00000583206 HSPA2P54652 639 aa16.34■□□□□ 0.21
TVP23C-209ENST00000583206 NEO1Q92859 1461 aa16.34■□□□□ 0.21
TVP23C-209ENST00000583206 ABCA9Q8IUA7 1624 aa16.34■□□□□ 0.21
TVP23C-209ENST00000583206 MADDQ8WXG6 1647 aa16.34■□□□□ 0.21
TVP23C-209ENST00000583206 FRMPD1Q5SYB0 1578 aa16.32■□□□□ 0.2
TVP23C-209ENST00000583206 CTTNBP2Q8WZ74 1663 aa16.31■□□□□ 0.2
TVP23C-209ENST00000583206 PRXQ9BXM0 1461 aa16.31■□□□□ 0.2
TVP23C-209ENST00000583206 ARID4BQ4LE39 1312 aaPredicted RBP16.31■□□□□ 0.2
TVP23C-209ENST00000583206 P3H3Q8IVL6 736 aa16.3■□□□□ 0.2
TVP23C-209ENST00000583206 CERKQ8TCT0 537 aa16.3■□□□□ 0.2
TVP23C-209ENST00000583206 ILDR2Q71H61 639 aa16.28■□□□□ 0.2
TVP23C-209ENST00000583206 FHOD3Q2V2M9 1422 aa16.22■□□□□ 0.19
TVP23C-209ENST00000583206 RIMS1Q86UR5 1692 aaKnown RBP16.22■□□□□ 0.19
TVP23C-209ENST00000583206 ARHGEF40Q8TER5 1519 aa16.22■□□□□ 0.19
TVP23C-209ENST00000583206 DENND4BO75064 1496 aaPredicted RBP16.22■□□□□ 0.19
TVP23C-209ENST00000583206 SOCS7O14512 581 aa16.21■□□□□ 0.19
TVP23C-209ENST00000583206 FAM9AQ8IZU1 332 aaPredicted RBP16.2■□□□□ 0.18
TVP23C-209ENST00000583206 AKNAQ7Z591 1439 aa16.19■□□□□ 0.18
TVP23C-209ENST00000583206 NUP153P49790 1475 aaKnown RBP16.19■□□□□ 0.18
TVP23C-209ENST00000583206 PLPPR3Q6T4P5 718 aa16.19■□□□□ 0.18
TVP23C-209ENST00000583206 SIGLEC1Q9BZZ2 1709 aa16.19■□□□□ 0.18
TVP23C-209ENST00000583206 YEATS2Q9ULM3 1422 aa16.18■□□□□ 0.18
TVP23C-209ENST00000583206 RICTORQ6R327 1708 aa16.17■□□□□ 0.18
TVP23C-209ENST00000583206 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.17■□□□□ 0.18
TVP23C-209ENST00000583206 HNRNPUL2Q1KMD3 747 aaKnown RBP16.17■□□□□ 0.18
TVP23C-209ENST00000583206 SAMD9Q5K651 1589 aa16.16■□□□□ 0.18
TVP23C-209ENST00000583206 RAPGEF6Q8TEU7 1601 aa16.16■□□□□ 0.18
TVP23C-209ENST00000583206 DISP3Q9P2K9 1392 aa16.15■□□□□ 0.18
TVP23C-209ENST00000583206 POGZQ7Z3K3 1410 aa16.15■□□□□ 0.18
TVP23C-209ENST00000583206 FANCAO15360 1455 aa16.14■□□□□ 0.17
TVP23C-209ENST00000583206 ZMYM4Q5VZL5 1548 aa16.14■□□□□ 0.17
TVP23C-209ENST00000583206 PLEKHD1A6NEE1 506 aa16.13■□□□□ 0.17
TVP23C-209ENST00000583206 MLECQ14165 292 aa16.12■□□□□ 0.17
TVP23C-209ENST00000583206 MAGI2Q86UL8 1455 aa16.11■□□□□ 0.17
TVP23C-209ENST00000583206 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.11■□□□□ 0.17
TVP23C-209ENST00000583206 ZFYVE16Q7Z3T8 1539 aa16.1■□□□□ 0.17
TVP23C-209ENST00000583206 TTC37Q6PGP7 1564 aa16.09■□□□□ 0.17
TVP23C-209ENST00000583206 CEBPAP49715 358 aaPredicted RBP16.09■□□□□ 0.17
TVP23C-209ENST00000583206 EFCAB5A4FU69 1503 aa16.08■□□□□ 0.16
TVP23C-209ENST00000583206 ARHGEF12Q9NZN5 1544 aa16.08■□□□□ 0.16
TVP23C-209ENST00000583206 HECW1Q76N89 1606 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms