RNA–Protein interactions for RNA: ENST00000582844.5

CSNK1D-221, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 957 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-221ENST00000582844 CUL7Q14999 1698 aa36.79■■■■□ 3.48
CSNK1D-221ENST00000582844 RUSC2Q8N2Y8 1516 aa36.78■■■■□ 3.48
CSNK1D-221ENST00000582844 CARMIL1Q5VZK9 1371 aa36.66■■■■□ 3.46
CSNK1D-221ENST00000582844 KIAA0586Q9BVV6 1533 aa36.64■■■■□ 3.46
CSNK1D-221ENST00000582844 RAPGEF2Q9Y4G8 1499 aa36.36■■■■□ 3.41
CSNK1D-221ENST00000582844 IQGAP2Q13576 1575 aa36.34■■■■□ 3.41
CSNK1D-221ENST00000582844 ADCY10Q96PN6 1610 aa36.32■■■■□ 3.4
CSNK1D-221ENST00000582844 NPM1P06748 294 aaKnown RBP eCLIP36.3■■■■□ 3.4
CSNK1D-221ENST00000582844 PTPRGP23470 1445 aa36.26■■■■□ 3.4
CSNK1D-221ENST00000582844 CARMIL2Q6F5E8 1435 aa36.26■■■■□ 3.4
CSNK1D-221ENST00000582844 KIF13AQ9H1H9 1805 aa36.26■■■■□ 3.39
CSNK1D-221ENST00000582844 TTBK1Q5TCY1 1321 aaPredicted RBP36.26■■■■□ 3.39
CSNK1D-221ENST00000582844 TNIKQ9UKE5 1360 aa36.21■■■■□ 3.39
CSNK1D-221ENST00000582844 MAPKBP1O60336 1514 aa36.17■■■■□ 3.38
CSNK1D-221ENST00000582844 DISP1Q96F81 1524 aa36.16■■■■□ 3.38
CSNK1D-221ENST00000582844 FAM69CQ0P6D2 419 aa36.11■■■■□ 3.37
CSNK1D-221ENST00000582844 UGGT2Q9NYU1 1516 aa36.11■■■■□ 3.37
CSNK1D-221ENST00000582844 ABCC10Q5T3U5 1492 aa36.11■■■■□ 3.37
CSNK1D-221ENST00000582844 PRXQ9BXM0 1461 aa36.06■■■■□ 3.36
CSNK1D-221ENST00000582844 CTTNBP2Q8WZ74 1663 aa36.06■■■■□ 3.36
CSNK1D-221ENST00000582844 DIP2BQ9P265 1576 aa36.03■■■■□ 3.36
CSNK1D-221ENST00000582844 KIAA0556O60303 1618 aa36.01■■■■□ 3.35
CSNK1D-221ENST00000582844 ABCC2Q92887 1545 aa35.99■■■■□ 3.35
CSNK1D-221ENST00000582844 UACAQ9BZF9 1416 aa35.98■■■■□ 3.35
CSNK1D-221ENST00000582844 UHRF1BP1LA0JNW5 1464 aa35.96■■■■□ 3.35
CSNK1D-221ENST00000582844 CSRNP3Q8WYN3 585 aa35.92■■■■□ 3.34
CSNK1D-221ENST00000582844 ASXL2Q76L83 1435 aa35.85■■■■□ 3.33
CSNK1D-221ENST00000582844 TSPOAP1O95153 1857 aa35.85■■■■□ 3.33
CSNK1D-221ENST00000582844 GOLGA3Q08378 1498 aa35.85■■■■□ 3.33
CSNK1D-221ENST00000582844 PLB1Q6P1J6 1458 aa35.81■■■■□ 3.32
CSNK1D-221ENST00000582844 KDM5BQ9UGL1 1544 aa35.81■■■■□ 3.32
CSNK1D-221ENST00000582844 ZCCHC11Q5TAX3 1644 aaKnown RBP35.75■■■■□ 3.31
CSNK1D-221ENST00000582844 EEA1Q15075 1411 aa35.75■■■■□ 3.31
CSNK1D-221ENST00000582844 FAM9AQ8IZU1 332 aaPredicted RBP35.73■■■■□ 3.31
CSNK1D-221ENST00000582844 GLI2P10070 1586 aa35.69■■■■□ 3.3
CSNK1D-221ENST00000582844 P3H3Q8IVL6 736 aa35.67■■■■□ 3.3
CSNK1D-221ENST00000582844 ABCA8O94911 1581 aa35.66■■■■□ 3.3
CSNK1D-221ENST00000582844 KDM6BO15054 1643 aa35.64■■■■□ 3.3
CSNK1D-221ENST00000582844 EPRSP07814 1512 aaKnown RBP35.63■■■■□ 3.29
CSNK1D-221ENST00000582844 AEBP2Q6ZN18 517 aaPredicted RBP35.6■■■■□ 3.29
CSNK1D-221ENST00000582844 PPRC1Q5VV67 1664 aaKnown RBP35.59■■■■□ 3.29
CSNK1D-221ENST00000582844 CHIC1Q5VXU3 224 aa35.58■■■■□ 3.29
CSNK1D-221ENST00000582844 SAMD9Q5K651 1589 aa35.55■■■■□ 3.28
CSNK1D-221ENST00000582844 WDR7Q9Y4E6 1490 aa35.54■■■■□ 3.28
CSNK1D-221ENST00000582844 MAP3K4Q9Y6R4 1608 aa35.53■■■■□ 3.28
CSNK1D-221ENST00000582844 RANGAP1P46060 587 aaPredicted RBP35.51■■■■□ 3.28
CSNK1D-221ENST00000582844 KIF21BO75037 1637 aa35.46■■■■□ 3.27
CSNK1D-221ENST00000582844 KCNH8Q96L42 1107 aa35.46■■■■□ 3.27
CSNK1D-221ENST00000582844 ARID3CA6NKF2 412 aa35.45■■■■□ 3.27
CSNK1D-221ENST00000582844 ATP10BO94823 1461 aa35.39■■■■□ 3.26
CSNK1D-221ENST00000582844 TEX14Q8IWB6 1497 aa35.37■■■■□ 3.25
CSNK1D-221ENST00000582844 EHMT2Q96KQ7 1210 aa35.35■■■■□ 3.25
CSNK1D-221ENST00000582844 RAPGEF6Q8TEU7 1601 aa35.35■■■■□ 3.25
CSNK1D-221ENST00000582844 COL17A1Q9UMD9 1497 aaPredicted RBP35.35■■■■□ 3.25
CSNK1D-221ENST00000582844 FHOD3Q2V2M9 1422 aa35.33■■■■□ 3.25
CSNK1D-221ENST00000582844 CFAP43Q8NDM7 1665 aa35.32■■■■□ 3.24
CSNK1D-221ENST00000582844 CD109Q6YHK3 1445 aa35.32■■■■□ 3.24
CSNK1D-221ENST00000582844 UBTFP17480 764 aaKnown RBP35.26■■■■□ 3.24
CSNK1D-221ENST00000582844 MAGI3Q5TCQ9 1506 aa35.25■■■■□ 3.23
CSNK1D-221ENST00000582844 EFCAB5A4FU69 1503 aa35.23■■■■□ 3.23
CSNK1D-221ENST00000582844 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.23■■■■□ 3.23
CSNK1D-221ENST00000582844 HNRNPUL2Q1KMD3 747 aaKnown RBP35.23■■■■□ 3.23
CSNK1D-221ENST00000582844 NUP153P49790 1475 aaKnown RBP35.22■■■■□ 3.23
CSNK1D-221ENST00000582844 KDM4FA0A1W2PPD8 638 aa35.18■■■■□ 3.22
CSNK1D-221ENST00000582844 ABCA9Q8IUA7 1624 aa35.11■■■■□ 3.21
CSNK1D-221ENST00000582844 PLEKHD1A6NEE1 506 aa35.04■■■■□ 3.2
CSNK1D-221ENST00000582844 ARHGAP35Q9NRY4 1499 aa35.01■■■■□ 3.19
CSNK1D-221ENST00000582844 ARAP3Q8WWN8 1544 aa34.97■■■■□ 3.19
CSNK1D-221ENST00000582844 ADGRL1O94910 1474 aa34.94■■■■□ 3.18
CSNK1D-221ENST00000582844 CDK13Q14004 1512 aaKnown RBP34.93■■■■□ 3.18
CSNK1D-221ENST00000582844 FMN1Q68DA7 1419 aa34.93■■■■□ 3.18
CSNK1D-221ENST00000582844 ATP1B4Q9UN42 357 aaPredicted RBP34.93■■■■□ 3.18
CSNK1D-221ENST00000582844 PHLDB1Q86UU1 1377 aa34.91■■■■□ 3.18
CSNK1D-221ENST00000582844 NEO1Q92859 1461 aa34.88■■■■□ 3.17
CSNK1D-221ENST00000582844 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.85■■■■□ 3.17
CSNK1D-221ENST00000582844 HECW1Q76N89 1606 aa34.84■■■■□ 3.17
CSNK1D-221ENST00000582844 RAPGEF3O95398 923 aa34.83■■■■□ 3.17
CSNK1D-221ENST00000582844 TTC37Q6PGP7 1564 aa34.79■■■■□ 3.16
CSNK1D-221ENST00000582844 FANCAO15360 1455 aa34.72■■■■□ 3.15
CSNK1D-221ENST00000582844 FRMPD1Q5SYB0 1578 aa34.71■■■■□ 3.15
CSNK1D-221ENST00000582844 CDK11AQ9UQ88 783 aaPredicted RBP34.71■■■■□ 3.15
CSNK1D-221ENST00000582844 LRRIQ1Q96JM4 1722 aa34.71■■■■□ 3.15
CSNK1D-221ENST00000582844 AKNAQ7Z591 1439 aa34.71■■■■□ 3.15
CSNK1D-221ENST00000582844 CFAP74Q9C0B2 1584 aa34.67■■■■□ 3.14
CSNK1D-221ENST00000582844 DENND4BO75064 1496 aaPredicted RBP34.65■■■■□ 3.14
CSNK1D-221ENST00000582844 RICTORQ6R327 1708 aa34.63■■■■□ 3.13
CSNK1D-221ENST00000582844 PLCH2O75038 1416 aa34.63■■■■□ 3.13
CSNK1D-221ENST00000582844 PCF11O94913 1555 aaKnown RBP34.61■■■■□ 3.13
CSNK1D-221ENST00000582844 KIF14Q15058 1648 aa34.6■■■■□ 3.13
CSNK1D-221ENST00000582844 CASKIN1Q8WXD9 1431 aa34.6■■■■□ 3.13
CSNK1D-221ENST00000582844 TROQ12816 1431 aaPredicted RBP34.59■■■■□ 3.13
CSNK1D-221ENST00000582844 CLIP1P30622 1438 aa34.58■■■■□ 3.13
CSNK1D-221ENST00000582844 MYO5CQ9NQX4 1742 aa34.57■■■■□ 3.12
CSNK1D-221ENST00000582844 EFCAB2Q5VUJ9 269 aa34.51■■■■□ 3.12
CSNK1D-221ENST00000582844 CCDC18Q5T9S5 1454 aa34.51■■■■□ 3.11
CSNK1D-221ENST00000582844 SCAPERQ9BY12 1400 aa34.5■■■■□ 3.11
CSNK1D-221ENST00000582844 ARID4BQ4LE39 1312 aaPredicted RBP34.48■■■■□ 3.11
CSNK1D-221ENST00000582844 ARHGEF40Q8TER5 1519 aa34.47■■■■□ 3.11
CSNK1D-221ENST00000582844 FYCO1Q9BQS8 1478 aa34.46■■■■□ 3.11
CSNK1D-221ENST00000582844 ZMYM4Q5VZL5 1548 aa34.45■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms