RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 UBTFP17480 764 aaKnown RBP15.54■□□□□ 0.08
RFFL-210ENST00000582308 OSCARQ8IYS5 282 aa15.52■□□□□ 0.08
RFFL-210ENST00000582308 KIAA0586Q9BVV6 1533 aa15.5■□□□□ 0.07
RFFL-210ENST00000582308 CLASP1Q7Z460 1538 aa15.49■□□□□ 0.07
RFFL-210ENST00000582308 TNIKQ9UKE5 1360 aa15.49■□□□□ 0.07
RFFL-210ENST00000582308 IQGAP2Q13576 1575 aa15.48■□□□□ 0.07
RFFL-210ENST00000582308 SHROOM2Q13796 1616 aa15.43■□□□□ 0.06
RFFL-210ENST00000582308 JPH4Q96JJ6 628 aa15.42■□□□□ 0.06
RFFL-210ENST00000582308 UGGT2Q9NYU1 1516 aa15.41■□□□□ 0.06
RFFL-210ENST00000582308 RANGAP1P46060 587 aaPredicted RBP15.4■□□□□ 0.06
RFFL-210ENST00000582308 CEP162Q5TB80 1403 aa15.36■□□□□ 0.05
RFFL-210ENST00000582308 DISP1Q96F81 1524 aa15.36■□□□□ 0.05
RFFL-210ENST00000582308 PRG4Q92954 1404 aaPredicted RBP15.35■□□□□ 0.05
RFFL-210ENST00000582308 SAMD9Q5K651 1589 aa15.35■□□□□ 0.05
RFFL-210ENST00000582308 ERCC6L2Q5T890 1561 aa15.35■□□□□ 0.05
RFFL-210ENST00000582308 CLIP1P30622 1438 aa15.34■□□□□ 0.05
RFFL-210ENST00000582308 ARHGAP35Q9NRY4 1499 aa15.33■□□□□ 0.05
RFFL-210ENST00000582308 EFCAB5A4FU69 1503 aa15.33■□□□□ 0.04
RFFL-210ENST00000582308 KIAA0556O60303 1618 aa15.32■□□□□ 0.04
RFFL-210ENST00000582308 P3H3Q8IVL6 736 aa15.31■□□□□ 0.04
RFFL-210ENST00000582308 CARMIL2Q6F5E8 1435 aa15.3■□□□□ 0.04
RFFL-210ENST00000582308 ARAP1Q96P48 1450 aa15.27■□□□□ 0.04
RFFL-210ENST00000582308 FHOD3Q2V2M9 1422 aa15.27■□□□□ 0.04
RFFL-210ENST00000582308 ARHGEF11O15085 1522 aa15.27■□□□□ 0.03
RFFL-210ENST00000582308 RIMBP3CA6NJZ7 1639 aa15.26■□□□□ 0.03
RFFL-210ENST00000582308 RIMBP3BA6NNM3 1639 aa15.26■□□□□ 0.03
RFFL-210ENST00000582308 RIMBP3Q9UFD9 1639 aa15.26■□□□□ 0.03
RFFL-210ENST00000582308 TTBK1Q5TCY1 1321 aaPredicted RBP15.21■□□□□ 0.03
RFFL-210ENST00000582308 PTPRGP23470 1445 aa15.21■□□□□ 0.03
RFFL-210ENST00000582308 DNAJC5Q9H3Z4 198 aa15.21■□□□□ 0.03
RFFL-210ENST00000582308 FMN1Q68DA7 1419 aa15.17■□□□□ 0.02
RFFL-210ENST00000582308 VPS8Q8N3P4 1428 aa15.15■□□□□ 0.02
RFFL-210ENST00000582308 ABCA8O94911 1581 aa15.15■□□□□ 0.02
RFFL-210ENST00000582308 PLB1Q6P1J6 1458 aa15.14■□□□□ 0.01
RFFL-210ENST00000582308 RAPGEF6Q8TEU7 1601 aa15.14■□□□□ 0.01
RFFL-210ENST00000582308 PCF11O94913 1555 aaKnown RBP15.13■□□□□ 0.01
RFFL-210ENST00000582308 CYB5RLQ6IPT4 315 aa15.12■□□□□ 0.01
RFFL-210ENST00000582308 CASKIN1Q8WXD9 1431 aa15.11■□□□□ 0.01
RFFL-210ENST00000582308 UACAQ9BZF9 1416 aa15.11■□□□□ 0.01
RFFL-210ENST00000582308 LRRIQ1Q96JM4 1722 aa15.1■□□□□ 0.01
RFFL-210ENST00000582308 ADCY10Q96PN6 1610 aa15.1■□□□□ 0.01
RFFL-210ENST00000582308 ABCC2Q92887 1545 aa15.09■□□□□ 0.01
RFFL-210ENST00000582308 UHRF1BP1LA0JNW5 1464 aa15.08■□□□□ 0.01
RFFL-210ENST00000582308 FYCO1Q9BQS8 1478 aa15.08■□□□□ 0.01
RFFL-210ENST00000582308 NUP153P49790 1475 aaKnown RBP15.08■□□□□ 0
RFFL-210ENST00000582308 ATP1B4Q9UN42 357 aaPredicted RBP15.07■□□□□ 0
RFFL-210ENST00000582308 HECW1Q76N89 1606 aa15.06■□□□□ 0
RFFL-210ENST00000582308 ARID3CA6NKF2 412 aa15.04■□□□□ -0
RFFL-210ENST00000582308 ATP10BO94823 1461 aa15.03■□□□□ -0
RFFL-210ENST00000582308 EPRSP07814 1512 aaKnown RBP15.02■□□□□ -0
RFFL-210ENST00000582308 ZCCHC11Q5TAX3 1644 aaKnown RBP15.02□□□□□ -0.01
RFFL-210ENST00000582308 CDK13Q14004 1512 aaKnown RBP15.02□□□□□ -0.01
RFFL-210ENST00000582308 KDM5BQ9UGL1 1544 aa15.02□□□□□ -0.01
RFFL-210ENST00000582308 CFAP43Q8NDM7 1665 aa15□□□□□ -0.01
RFFL-210ENST00000582308 CCDC18Q5T9S5 1454 aa14.99□□□□□ -0.01
RFFL-210ENST00000582308 TIAM1Q13009 1591 aa14.98□□□□□ -0.01
RFFL-210ENST00000582308 MAP3K1Q13233 1512 aa14.97□□□□□ -0.01
RFFL-210ENST00000582308 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.95□□□□□ -0.02
RFFL-210ENST00000582308 NPM1P06748 294 aaKnown RBP eCLIP14.95□□□□□ -0.02
RFFL-210ENST00000582308 APLP2Q06481 763 aa14.95□□□□□ -0.02
RFFL-210ENST00000582308 HNRNPUL2Q1KMD3 747 aaKnown RBP14.95□□□□□ -0.02
RFFL-210ENST00000582308 MAGI3Q5TCQ9 1506 aa14.93□□□□□ -0.02
RFFL-210ENST00000582308 KANK4Q5T7N3 995 aaPredicted RBP14.93□□□□□ -0.02
RFFL-210ENST00000582308 ASXL2Q76L83 1435 aa14.91□□□□□ -0.02
RFFL-210ENST00000582308 LRRC9Q6ZRR7 1453 aa14.9□□□□□ -0.02
RFFL-210ENST00000582308 PLEKHD1A6NEE1 506 aa14.9□□□□□ -0.02
RFFL-210ENST00000582308 CDK11AQ9UQ88 783 aaPredicted RBP14.9□□□□□ -0.02
RFFL-210ENST00000582308 MAPKBP1O60336 1514 aa14.89□□□□□ -0.03
RFFL-210ENST00000582308 PPARGC1BQ86YN6 1023 aaKnown RBP14.89□□□□□ -0.03
RFFL-210ENST00000582308 TROQ12816 1431 aaPredicted RBP14.89□□□□□ -0.03
RFFL-210ENST00000582308 MTUS2Q5JR59 1369 aa14.88□□□□□ -0.03
RFFL-210ENST00000582308 WDR7Q9Y4E6 1490 aa14.88□□□□□ -0.03
RFFL-210ENST00000582308 EHBP1L1Q8N3D4 1523 aa14.87□□□□□ -0.03
RFFL-210ENST00000582308 KIF14Q15058 1648 aa14.85□□□□□ -0.03
RFFL-210ENST00000582308 KCNH8Q96L42 1107 aa14.85□□□□□ -0.03
RFFL-210ENST00000582308 SUPT6HQ7KZ85 1726 aaKnown RBP14.83□□□□□ -0.03
RFFL-210ENST00000582308 NCOA2Q15596 1464 aa14.8□□□□□ -0.04
RFFL-210ENST00000582308 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.8□□□□□ -0.04
RFFL-210ENST00000582308 KIF13AQ9H1H9 1805 aa14.8□□□□□ -0.04
RFFL-210ENST00000582308 ABCC10Q5T3U5 1492 aa14.79□□□□□ -0.04
RFFL-210ENST00000582308 TTC37Q6PGP7 1564 aa14.79□□□□□ -0.04
RFFL-210ENST00000582308 DIP2BQ9P265 1576 aa14.79□□□□□ -0.04
RFFL-210ENST00000582308 CDC42BPAQ5VT25 1732 aa14.78□□□□□ -0.04
RFFL-210ENST00000582308 ABCA9Q8IUA7 1624 aa14.77□□□□□ -0.04
RFFL-210ENST00000582308 GLI2P10070 1586 aa14.77□□□□□ -0.05
RFFL-210ENST00000582308 MYO5CQ9NQX4 1742 aa14.75□□□□□ -0.05
RFFL-210ENST00000582308 CDC42BPBQ9Y5S2 1711 aa14.75□□□□□ -0.05
RFFL-210ENST00000582308 PHLDB1Q86UU1 1377 aa14.74□□□□□ -0.05
RFFL-210ENST00000582308 FAM69CQ0P6D2 419 aa14.74□□□□□ -0.05
RFFL-210ENST00000582308 MAP3K4Q9Y6R4 1608 aa14.74□□□□□ -0.05
RFFL-210ENST00000582308 GPATCH8Q9UKJ3 1502 aaKnown RBP14.73□□□□□ -0.05
RFFL-210ENST00000582308 TSPOAP1O95153 1857 aa14.73□□□□□ -0.05
RFFL-210ENST00000582308 CCNB3Q8WWL7 1395 aa14.73□□□□□ -0.05
RFFL-210ENST00000582308 PREX2Q70Z35 1606 aa14.72□□□□□ -0.05
RFFL-210ENST00000582308 ITSN2Q9NZM3 1697 aa14.71□□□□□ -0.05
RFFL-210ENST00000582308 MYOM3Q5VTT5 1437 aa14.71□□□□□ -0.05
RFFL-210ENST00000582308 CD109Q6YHK3 1445 aa14.7□□□□□ -0.06
RFFL-210ENST00000582308 PLCH2O75038 1416 aa14.69□□□□□ -0.06
RFFL-210ENST00000582308 PPRC1Q5VV67 1664 aaKnown RBP14.68□□□□□ -0.06
RFFL-210ENST00000582308 ARAP3Q8WWN8 1544 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms