RNA–Protein interactions for RNA: ENST00000581743.5

NARF-217, Transcript of nuclear prelamin A recognition factor, human

TSL 5

Gene NARF, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-217	ENST00000581743	RUSC2	Q8N2Y8	1516 aa		29.08	■■■□□ 2.25
NARF-217	ENST00000581743	CARMIL1	Q5VZK9	1371 aa		29.01	■■■□□ 2.24
NARF-217	ENST00000581743	CUL7	Q14999	1698 aa		29.01	■■■□□ 2.23
NARF-217	ENST00000581743	KIAA0586	Q9BVV6	1533 aa		28.98	■■■□□ 2.23
NARF-217	ENST00000581743	TTBK1	Q5TCY1	1321 aa	Predicted RBP	28.85	■■■□□ 2.21
NARF-217	ENST00000581743	NPM1	P06748	294 aa	Known RBP eCLIP	28.78	■■■□□ 2.2
NARF-217	ENST00000581743	ADCY10	Q96PN6	1610 aa		28.78	■■■□□ 2.2
NARF-217	ENST00000581743	KIF13A	Q9H1H9	1805 aa		28.76	■■■□□ 2.19
NARF-217	ENST00000581743	PTPRG	P23470	1445 aa		28.73	■■■□□ 2.19
NARF-217	ENST00000581743	RAPGEF2	Q9Y4G8	1499 aa		28.72	■■■□□ 2.19
NARF-217	ENST00000581743	FAM69C	Q0P6D2	419 aa		28.71	■■■□□ 2.19
NARF-217	ENST00000581743	IQGAP2	Q13576	1575 aa		28.71	■■■□□ 2.19
NARF-217	ENST00000581743	CARMIL2	Q6F5E8	1435 aa		28.67	■■■□□ 2.18
NARF-217	ENST00000581743	TNIK	Q9UKE5	1360 aa		28.66	■■■□□ 2.18
NARF-217	ENST00000581743	ABCC10	Q5T3U5	1492 aa		28.65	■■■□□ 2.18
NARF-217	ENST00000581743	MAPKBP1	O60336	1514 aa		28.63	■■■□□ 2.17
NARF-217	ENST00000581743	DISP1	Q96F81	1524 aa		28.63	■■■□□ 2.17
NARF-217	ENST00000581743	DIP2B	Q9P265	1576 aa		28.57	■■■□□ 2.16
NARF-217	ENST00000581743	UGGT2	Q9NYU1	1516 aa		28.53	■■■□□ 2.16
NARF-217	ENST00000581743	UACA	Q9BZF9	1416 aa		28.5	■■■□□ 2.15
NARF-217	ENST00000581743	ABCC2	Q92887	1545 aa		28.49	■■■□□ 2.15
NARF-217	ENST00000581743	AEBP2	Q6ZN18	517 aa	Predicted RBP	28.49	■■■□□ 2.15
NARF-217	ENST00000581743	PRX	Q9BXM0	1461 aa		28.47	■■■□□ 2.15
NARF-217	ENST00000581743	KIAA0556	O60303	1618 aa		28.47	■■■□□ 2.15
NARF-217	ENST00000581743	TSPOAP1	O95153	1857 aa		28.45	■■■□□ 2.15
NARF-217	ENST00000581743	UHRF1BP1L	A0JNW5	1464 aa		28.44	■■■□□ 2.14
NARF-217	ENST00000581743	CTTNBP2	Q8WZ74	1663 aa		28.44	■■■□□ 2.14
NARF-217	ENST00000581743	ASXL2	Q76L83	1435 aa		28.43	■■■□□ 2.14
NARF-217	ENST00000581743	CSRNP3	Q8WYN3	585 aa		28.39	■■■□□ 2.14
NARF-217	ENST00000581743	PLB1	Q6P1J6	1458 aa		28.34	■■■□□ 2.13
NARF-217	ENST00000581743	KDM5B	Q9UGL1	1544 aa		28.34	■■■□□ 2.13
NARF-217	ENST00000581743	P3H3	Q8IVL6	736 aa		28.33	■■■□□ 2.13
NARF-217	ENST00000581743	FAM9A	Q8IZU1	332 aa	Predicted RBP	28.31	■■■□□ 2.12
NARF-217	ENST00000581743	ZCCHC11	Q5TAX3	1644 aa	Known RBP	28.3	■■■□□ 2.12
NARF-217	ENST00000581743	GOLGA3	Q08378	1498 aa		28.27	■■■□□ 2.12
NARF-217	ENST00000581743	KDM6B	O15054	1643 aa		28.27	■■■□□ 2.12
NARF-217	ENST00000581743	GLI2	P10070	1586 aa		28.25	■■■□□ 2.11
NARF-217	ENST00000581743	EPRS	P07814	1512 aa	Known RBP	28.24	■■■□□ 2.11
NARF-217	ENST00000581743	PPRC1	Q5VV67	1664 aa	Known RBP	28.23	■■■□□ 2.11
NARF-217	ENST00000581743	ABCA8	O94911	1581 aa		28.21	■■■□□ 2.11
NARF-217	ENST00000581743	ARID3C	A6NKF2	412 aa		28.19	■■■□□ 2.1
NARF-217	ENST00000581743	RANGAP1	P46060	587 aa	Predicted RBP	28.19	■■■□□ 2.1
NARF-217	ENST00000581743	KCNH8	Q96L42	1107 aa		28.16	■■■□□ 2.1
NARF-217	ENST00000581743	WDR7	Q9Y4E6	1490 aa		28.14	■■■□□ 2.09
NARF-217	ENST00000581743	MAP3K4	Q9Y6R4	1608 aa		28.13	■■■□□ 2.09
NARF-217	ENST00000581743	EEA1	Q15075	1411 aa		28.12	■■■□□ 2.09
NARF-217	ENST00000581743	COL17A1	Q9UMD9	1497 aa	Predicted RBP	28.12	■■■□□ 2.09
NARF-217	ENST00000581743	CHIC1	Q5VXU3	224 aa		28.08	■■■□□ 2.09
NARF-217	ENST00000581743	EHMT2	Q96KQ7	1210 aa		28.08	■■■□□ 2.09
NARF-217	ENST00000581743	KDM4F	A0A1W2PPD8	638 aa		28.07	■■■□□ 2.08
NARF-217	ENST00000581743	SAMD9	Q5K651	1589 aa		28.05	■■■□□ 2.08
NARF-217	ENST00000581743	ATP10B	O94823	1461 aa		28.04	■■■□□ 2.08
NARF-217	ENST00000581743	CD109	Q6YHK3	1445 aa		28	■■■□□ 2.07
NARF-217	ENST00000581743	TEX14	Q8IWB6	1497 aa		27.98	■■■□□ 2.07
NARF-217	ENST00000581743	FHOD3	Q2V2M9	1422 aa		27.97	■■■□□ 2.07
NARF-217	ENST00000581743	RAPGEF6	Q8TEU7	1601 aa		27.93	■■■□□ 2.06
NARF-217	ENST00000581743	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	27.93	■■■□□ 2.06
NARF-217	ENST00000581743	HNRNPUL2	Q1KMD3	747 aa	Known RBP	27.93	■■■□□ 2.06
NARF-217	ENST00000581743	KIF21B	O75037	1637 aa		27.92	■■■□□ 2.06
NARF-217	ENST00000581743	CFAP43	Q8NDM7	1665 aa		27.91	■■■□□ 2.06
NARF-217	ENST00000581743	MAGI3	Q5TCQ9	1506 aa		27.9	■■■□□ 2.06
NARF-217	ENST00000581743	UBTF	P17480	764 aa	Known RBP	27.87	■■■□□ 2.05
NARF-217	ENST00000581743	NUP153	P49790	1475 aa	Known RBP	27.86	■■■□□ 2.05
NARF-217	ENST00000581743	ADGRL1	O94910	1474 aa		27.77	■■■□□ 2.04
NARF-217	ENST00000581743	ABCA9	Q8IUA7	1624 aa		27.76	■■■□□ 2.03
NARF-217	ENST00000581743	EFCAB5	A4FU69	1503 aa		27.75	■■■□□ 2.03
NARF-217	ENST00000581743	PLEKHD1	A6NEE1	506 aa		27.73	■■■□□ 2.03
NARF-217	ENST00000581743	ATP1B4	Q9UN42	357 aa	Predicted RBP	27.69	■■■□□ 2.02
NARF-217	ENST00000581743	ARAP3	Q8WWN8	1544 aa		27.68	■■■□□ 2.02
NARF-217	ENST00000581743	RAPGEF3	O95398	923 aa		27.68	■■■□□ 2.02
NARF-217	ENST00000581743	ARHGAP35	Q9NRY4	1499 aa		27.66	■■■□□ 2.02
NARF-217	ENST00000581743	CDK13	Q14004	1512 aa	Known RBP	27.66	■■■□□ 2.02
NARF-217	ENST00000581743	PHLDB1	Q86UU1	1377 aa		27.59	■■■□□ 2.01
NARF-217	ENST00000581743	NEO1	Q92859	1461 aa		27.58	■■■□□ 2.01
NARF-217	ENST00000581743	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	27.58	■■■□□ 2.01	6e-21	■□□□□ 9.1
NARF-217	ENST00000581743	ILDR1	Q86SU0	546 aa	Predicted RBP	27.55	■■■□□ 2
NARF-217	ENST00000581743	FMN1	Q68DA7	1419 aa		27.53	■■■□□ 2
NARF-217	ENST00000581743	TTC37	Q6PGP7	1564 aa		27.52	■■■□□ 2
NARF-217	ENST00000581743	FRMPD1	Q5SYB0	1578 aa		27.51	■■□□□ 1.99
NARF-217	ENST00000581743	AKNA	Q7Z591	1439 aa		27.5	■■□□□ 1.99
NARF-217	ENST00000581743	FANCA	O15360	1455 aa		27.48	■■□□□ 1.99
NARF-217	ENST00000581743	HECW1	Q76N89	1606 aa		27.48	■■□□□ 1.99
NARF-217	ENST00000581743	DENND4B	O75064	1496 aa	Predicted RBP	27.44	■■□□□ 1.98
NARF-217	ENST00000581743	LRRIQ1	Q96JM4	1722 aa		27.43	■■□□□ 1.98
NARF-217	ENST00000581743	PLCH2	O75038	1416 aa		27.4	■■□□□ 1.98
NARF-217	ENST00000581743	RICTOR	Q6R327	1708 aa		27.39	■■□□□ 1.98
NARF-217	ENST00000581743	CDK11A	Q9UQ88	783 aa	Predicted RBP	27.39	■■□□□ 1.98
NARF-217	ENST00000581743	ARID4B	Q4LE39	1312 aa	Predicted RBP	27.39	■■□□□ 1.97
NARF-217	ENST00000581743	KIF14	Q15058	1648 aa		27.38	■■□□□ 1.97
NARF-217	ENST00000581743	CFAP74	Q9C0B2	1584 aa		27.35	■■□□□ 1.97
NARF-217	ENST00000581743	TRO	Q12816	1431 aa	Predicted RBP	27.34	■■□□□ 1.97
NARF-217	ENST00000581743	SCAPER	Q9BY12	1400 aa		27.34	■■□□□ 1.97
NARF-217	ENST00000581743	PCF11	O94913	1555 aa	Known RBP	27.32	■■□□□ 1.96
NARF-217	ENST00000581743	HECW2	Q9P2P5	1572 aa		27.32	■■□□□ 1.96
NARF-217	ENST00000581743	ADAMTSL3	P82987	1691 aa		27.32	■■□□□ 1.96
NARF-217	ENST00000581743	YEATS2	Q9ULM3	1422 aa		27.32	■■□□□ 1.96
NARF-217	ENST00000581743	EFCAB2	Q5VUJ9	269 aa		27.31	■■□□□ 1.96
NARF-217	ENST00000581743	CASKIN1	Q8WXD9	1431 aa		27.3	■■□□□ 1.96
NARF-217	ENST00000581743	BCORL1	Q5H9F3	1711 aa		27.28	■■□□□ 1.96
NARF-217	ENST00000581743	MYO5C	Q9NQX4	1742 aa		27.28	■■□□□ 1.96

Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms