RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 NUP160Q12769 1436 aa14.83□□□□□ -0.03
CDK5RAP3-220ENST00000581160 KIAA0586Q9BVV6 1533 aa14.81□□□□□ -0.04
CDK5RAP3-220ENST00000581160 CEP170Q5SW79 1584 aa14.81□□□□□ -0.04
CDK5RAP3-220ENST00000581160 JPH4Q96JJ6 628 aa14.76□□□□□ -0.05
CDK5RAP3-220ENST00000581160 CTTNBP2Q8WZ74 1663 aa14.75□□□□□ -0.05
CDK5RAP3-220ENST00000581160 IQGAP2Q13576 1575 aa14.73□□□□□ -0.05
CDK5RAP3-220ENST00000581160 CLASP1Q7Z460 1538 aa14.72□□□□□ -0.05
CDK5RAP3-220ENST00000581160 RANGAP1P46060 587 aaPredicted RBP14.7□□□□□ -0.06
CDK5RAP3-220ENST00000581160 UGGT2Q9NYU1 1516 aa14.69□□□□□ -0.06
CDK5RAP3-220ENST00000581160 CEP162Q5TB80 1403 aa14.66□□□□□ -0.06
CDK5RAP3-220ENST00000581160 SHROOM2Q13796 1616 aa14.66□□□□□ -0.06
CDK5RAP3-220ENST00000581160 CLIP1P30622 1438 aa14.66□□□□□ -0.06
CDK5RAP3-220ENST00000581160 PRG4Q92954 1404 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-220ENST00000581160 CARMIL2Q6F5E8 1435 aa14.64□□□□□ -0.07
CDK5RAP3-220ENST00000581160 DISP1Q96F81 1524 aa14.63□□□□□ -0.07
CDK5RAP3-220ENST00000581160 P3H3Q8IVL6 736 aa14.63□□□□□ -0.07
CDK5RAP3-220ENST00000581160 EFCAB5A4FU69 1503 aa14.62□□□□□ -0.07
CDK5RAP3-220ENST00000581160 ARHGAP35Q9NRY4 1499 aa14.62□□□□□ -0.07
CDK5RAP3-220ENST00000581160 SAMD9Q5K651 1589 aa14.61□□□□□ -0.07
CDK5RAP3-220ENST00000581160 KIAA0556O60303 1618 aa14.58□□□□□ -0.08
CDK5RAP3-220ENST00000581160 FHOD3Q2V2M9 1422 aa14.56□□□□□ -0.08
CDK5RAP3-220ENST00000581160 ARAP1Q96P48 1450 aa14.56□□□□□ -0.08
CDK5RAP3-220ENST00000581160 ERCC6L2Q5T890 1561 aa14.56□□□□□ -0.08
CDK5RAP3-220ENST00000581160 PTPRGP23470 1445 aa14.54□□□□□ -0.08
CDK5RAP3-220ENST00000581160 ARHGEF11O15085 1522 aa14.51□□□□□ -0.09
CDK5RAP3-220ENST00000581160 FMN1Q68DA7 1419 aa14.51□□□□□ -0.09
CDK5RAP3-220ENST00000581160 TTBK1Q5TCY1 1321 aaPredicted RBP14.51□□□□□ -0.09
CDK5RAP3-220ENST00000581160 DNAJC5Q9H3Z4 198 aa14.51□□□□□ -0.09
CDK5RAP3-220ENST00000581160 VPS8Q8N3P4 1428 aa14.48□□□□□ -0.09
CDK5RAP3-220ENST00000581160 RIMBP3CA6NJZ7 1639 aa14.48□□□□□ -0.09
CDK5RAP3-220ENST00000581160 RIMBP3BA6NNM3 1639 aa14.48□□□□□ -0.09
CDK5RAP3-220ENST00000581160 RIMBP3Q9UFD9 1639 aa14.48□□□□□ -0.09
CDK5RAP3-220ENST00000581160 CASKIN1Q8WXD9 1431 aa14.44□□□□□ -0.1
CDK5RAP3-220ENST00000581160 UACAQ9BZF9 1416 aa14.44□□□□□ -0.1
CDK5RAP3-220ENST00000581160 CYB5RLQ6IPT4 315 aa14.43□□□□□ -0.1
CDK5RAP3-220ENST00000581160 PLB1Q6P1J6 1458 aa14.43□□□□□ -0.1
CDK5RAP3-220ENST00000581160 ABCA8O94911 1581 aa14.43□□□□□ -0.1
CDK5RAP3-220ENST00000581160 ATP1B4Q9UN42 357 aaPredicted RBP14.42□□□□□ -0.1
CDK5RAP3-220ENST00000581160 UHRF1BP1LA0JNW5 1464 aa14.4□□□□□ -0.1
CDK5RAP3-220ENST00000581160 RAPGEF6Q8TEU7 1601 aa14.4□□□□□ -0.1
CDK5RAP3-220ENST00000581160 FYCO1Q9BQS8 1478 aa14.39□□□□□ -0.11
CDK5RAP3-220ENST00000581160 ABCC2Q92887 1545 aa14.37□□□□□ -0.11
CDK5RAP3-220ENST00000581160 APLP2Q06481 763 aa14.37□□□□□ -0.11
CDK5RAP3-220ENST00000581160 PCF11O94913 1555 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-220ENST00000581160 NUP153P49790 1475 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-220ENST00000581160 HECW1Q76N89 1606 aa14.35□□□□□ -0.11
CDK5RAP3-220ENST00000581160 NPM1P06748 294 aaKnown RBP eCLIP14.35□□□□□ -0.11
CDK5RAP3-220ENST00000581160 ATP10BO94823 1461 aa14.34□□□□□ -0.11
CDK5RAP3-220ENST00000581160 EPRSP07814 1512 aaKnown RBP14.34□□□□□ -0.11
CDK5RAP3-220ENST00000581160 MAP3K1Q13233 1512 aa14.33□□□□□ -0.12
CDK5RAP3-220ENST00000581160 ARID3CA6NKF2 412 aa14.33□□□□□ -0.12
CDK5RAP3-220ENST00000581160 ADCY10Q96PN6 1610 aa14.33□□□□□ -0.12
CDK5RAP3-220ENST00000581160 CCDC18Q5T9S5 1454 aa14.32□□□□□ -0.12
CDK5RAP3-220ENST00000581160 KDM5BQ9UGL1 1544 aa14.32□□□□□ -0.12
CDK5RAP3-220ENST00000581160 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.32□□□□□ -0.12
CDK5RAP3-220ENST00000581160 HNRNPUL2Q1KMD3 747 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP3-220ENST00000581160 CDK11AQ9UQ88 783 aaPredicted RBP14.31□□□□□ -0.12
CDK5RAP3-220ENST00000581160 PLEKHD1A6NEE1 506 aa14.3□□□□□ -0.12
CDK5RAP3-220ENST00000581160 LRRIQ1Q96JM4 1722 aa14.29□□□□□ -0.12
CDK5RAP3-220ENST00000581160 CDK13Q14004 1512 aaKnown RBP14.28□□□□□ -0.12
CDK5RAP3-220ENST00000581160 TIAM1Q13009 1591 aa14.27□□□□□ -0.12
CDK5RAP3-220ENST00000581160 KANK4Q5T7N3 995 aaPredicted RBP14.27□□□□□ -0.13
CDK5RAP3-220ENST00000581160 ZCCHC11Q5TAX3 1644 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-220ENST00000581160 LRRC9Q6ZRR7 1453 aa14.24□□□□□ -0.13
CDK5RAP3-220ENST00000581160 CFAP43Q8NDM7 1665 aa14.23□□□□□ -0.13
CDK5RAP3-220ENST00000581160 MTUS2Q5JR59 1369 aa14.22□□□□□ -0.13
CDK5RAP3-220ENST00000581160 PPARGC1BQ86YN6 1023 aaKnown RBP14.22□□□□□ -0.13
CDK5RAP3-220ENST00000581160 TROQ12816 1431 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP3-220ENST00000581160 ASXL2Q76L83 1435 aa14.21□□□□□ -0.13
CDK5RAP3-220ENST00000581160 MAGI3Q5TCQ9 1506 aa14.2□□□□□ -0.14
CDK5RAP3-220ENST00000581160 KCNH8Q96L42 1107 aa14.19□□□□□ -0.14
CDK5RAP3-220ENST00000581160 MAPKBP1O60336 1514 aa14.19□□□□□ -0.14
CDK5RAP3-220ENST00000581160 WDR7Q9Y4E6 1490 aa14.18□□□□□ -0.14
CDK5RAP3-220ENST00000581160 EHBP1L1Q8N3D4 1523 aa14.17□□□□□ -0.14
CDK5RAP3-220ENST00000581160 SUPT6HQ7KZ85 1726 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-220ENST00000581160 NCOA2Q15596 1464 aa14.12□□□□□ -0.15
CDK5RAP3-220ENST00000581160 ABCC10Q5T3U5 1492 aa14.11□□□□□ -0.15
CDK5RAP3-220ENST00000581160 KIF14Q15058 1648 aa14.1□□□□□ -0.15
CDK5RAP3-220ENST00000581160 CCNB3Q8WWL7 1395 aa14.09□□□□□ -0.15
CDK5RAP3-220ENST00000581160 FAM69CQ0P6D2 419 aa14.09□□□□□ -0.15
CDK5RAP3-220ENST00000581160 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.09□□□□□ -0.15
CDK5RAP3-220ENST00000581160 GLI2P10070 1586 aa14.08□□□□□ -0.16
CDK5RAP3-220ENST00000581160 PHLDB1Q86UU1 1377 aa14.08□□□□□ -0.16
CDK5RAP3-220ENST00000581160 GPATCH8Q9UKJ3 1502 aaKnown RBP14.06□□□□□ -0.16
CDK5RAP3-220ENST00000581160 ABCA9Q8IUA7 1624 aa14.06□□□□□ -0.16
CDK5RAP3-220ENST00000581160 CFDP1Q9UEE9 299 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-220ENST00000581160 PLCH2O75038 1416 aa14.05□□□□□ -0.16
CDK5RAP3-220ENST00000581160 MYOM3Q5VTT5 1437 aa14.05□□□□□ -0.16
CDK5RAP3-220ENST00000581160 CD109Q6YHK3 1445 aa14.04□□□□□ -0.16
CDK5RAP3-220ENST00000581160 TTC37Q6PGP7 1564 aa14.04□□□□□ -0.16
CDK5RAP3-220ENST00000581160 DIP2BQ9P265 1576 aa14.04□□□□□ -0.16
CDK5RAP3-220ENST00000581160 EFCAB2Q5VUJ9 269 aa14.03□□□□□ -0.16
CDK5RAP3-220ENST00000581160 MIA2Q96PC5 1412 aa14.03□□□□□ -0.16
CDK5RAP3-220ENST00000581160 TRHP20396 242 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-220ENST00000581160 CDC42BPAQ5VT25 1732 aa14.01□□□□□ -0.17
CDK5RAP3-220ENST00000581160 ARAP3Q8WWN8 1544 aa14□□□□□ -0.17
CDK5RAP3-220ENST00000581160 FGD6Q6ZV73 1430 aa14□□□□□ -0.17
CDK5RAP3-220ENST00000581160 MYO5CQ9NQX4 1742 aa14□□□□□ -0.17
CDK5RAP3-220ENST00000581160 MAP3K4Q9Y6R4 1608 aa14□□□□□ -0.17
CDK5RAP3-220ENST00000581160 RRBP1Q9P2E9 1410 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms