RNA–Protein interactions for RNA: ENST00000580898.5

PGAP3-207, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 4

Gene PGAP3, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-207ENST00000580898 CUL7Q14999 1698 aa23.6■■□□□ 1.37
PGAP3-207ENST00000580898 IGF1RP08069 1367 aa23.57■■□□□ 1.36
PGAP3-207ENST00000580898 KIAA0586Q9BVV6 1533 aa23.52■■□□□ 1.36
PGAP3-207ENST00000580898 CARMIL1Q5VZK9 1371 aa23.46■■□□□ 1.35
PGAP3-207ENST00000580898 NPM1P06748 294 aaKnown RBP eCLIP23.45■■□□□ 1.34
PGAP3-207ENST00000580898 CARMIL2Q6F5E8 1435 aa23.34■■□□□ 1.33
PGAP3-207ENST00000580898 MAPKBP1O60336 1514 aa23.33■■□□□ 1.32
PGAP3-207ENST00000580898 ADCY10Q96PN6 1610 aa23.31■■□□□ 1.32
PGAP3-207ENST00000580898 IQGAP2Q13576 1575 aa23.3■■□□□ 1.32
PGAP3-207ENST00000580898 KIF13AQ9H1H9 1805 aa23.29■■□□□ 1.32
PGAP3-207ENST00000580898 PTPRGP23470 1445 aa23.29■■□□□ 1.32
PGAP3-207ENST00000580898 ABCC10Q5T3U5 1492 aa23.29■■□□□ 1.32
PGAP3-207ENST00000580898 TNIKQ9UKE5 1360 aa23.27■■□□□ 1.32
PGAP3-207ENST00000580898 FAM69CQ0P6D2 419 aa23.27■■□□□ 1.32
PGAP3-207ENST00000580898 RAPGEF2Q9Y4G8 1499 aa23.27■■□□□ 1.32
PGAP3-207ENST00000580898 AEBP2Q6ZN18 517 aaPredicted RBP23.22■■□□□ 1.31
PGAP3-207ENST00000580898 DIP2BQ9P265 1576 aa23.21■■□□□ 1.31
PGAP3-207ENST00000580898 TTBK1Q5TCY1 1321 aaPredicted RBP23.2■■□□□ 1.3
PGAP3-207ENST00000580898 ABCC2Q92887 1545 aa23.15■■□□□ 1.3
PGAP3-207ENST00000580898 UGGT2Q9NYU1 1516 aa23.15■■□□□ 1.3
PGAP3-207ENST00000580898 DISP1Q96F81 1524 aa23.13■■□□□ 1.29
PGAP3-207ENST00000580898 UHRF1BP1LA0JNW5 1464 aa23.12■■□□□ 1.29
PGAP3-207ENST00000580898 UACAQ9BZF9 1416 aa23.12■■□□□ 1.29
PGAP3-207ENST00000580898 PLB1Q6P1J6 1458 aa23.09■■□□□ 1.29
PGAP3-207ENST00000580898 KIAA0556O60303 1618 aa23.08■■□□□ 1.28
PGAP3-207ENST00000580898 CTTNBP2Q8WZ74 1663 aa23.05■■□□□ 1.28
PGAP3-207ENST00000580898 ASXL2Q76L83 1435 aa23.05■■□□□ 1.28
PGAP3-207ENST00000580898 GOLGA3Q08378 1498 aa23.04■■□□□ 1.28
PGAP3-207ENST00000580898 KDM6BO15054 1643 aa23.03■■□□□ 1.28
PGAP3-207ENST00000580898 PRXQ9BXM0 1461 aa23.01■■□□□ 1.27
PGAP3-207ENST00000580898 KDM5BQ9UGL1 1544 aa23■■□□□ 1.27
PGAP3-207ENST00000580898 GLI2P10070 1586 aa22.99■■□□□ 1.27
PGAP3-207ENST00000580898 TSPOAP1O95153 1857 aa22.98■■□□□ 1.27
PGAP3-207ENST00000580898 FAM9AQ8IZU1 332 aaPredicted RBP22.96■■□□□ 1.27
PGAP3-207ENST00000580898 ZCCHC11Q5TAX3 1644 aaKnown RBP22.93■■□□□ 1.26
PGAP3-207ENST00000580898 EPRSP07814 1512 aaKnown RBP22.91■■□□□ 1.26
PGAP3-207ENST00000580898 TEX14Q8IWB6 1497 aa22.87■■□□□ 1.25
PGAP3-207ENST00000580898 CSRNP3Q8WYN3 585 aa22.87■■□□□ 1.25
PGAP3-207ENST00000580898 WDR7Q9Y4E6 1490 aa22.86■■□□□ 1.25
PGAP3-207ENST00000580898 EEA1Q15075 1411 aa22.86■■□□□ 1.25
PGAP3-207ENST00000580898 ABCA8O94911 1581 aa22.84■■□□□ 1.25
PGAP3-207ENST00000580898 MAP3K4Q9Y6R4 1608 aa22.84■■□□□ 1.25
PGAP3-207ENST00000580898 PPRC1Q5VV67 1664 aaKnown RBP22.84■■□□□ 1.25
PGAP3-207ENST00000580898 P3H3Q8IVL6 736 aa22.73■■□□□ 1.23
PGAP3-207ENST00000580898 CFAP43Q8NDM7 1665 aa22.72■■□□□ 1.23
PGAP3-207ENST00000580898 CD109Q6YHK3 1445 aa22.72■■□□□ 1.23
PGAP3-207ENST00000580898 SAMD9Q5K651 1589 aa22.72■■□□□ 1.23
PGAP3-207ENST00000580898 KCNH8Q96L42 1107 aa22.71■■□□□ 1.23
PGAP3-207ENST00000580898 MAGI3Q5TCQ9 1506 aa22.7■■□□□ 1.22
PGAP3-207ENST00000580898 KDM4FA0A1W2PPD8 638 aa22.68■■□□□ 1.22
PGAP3-207ENST00000580898 COL17A1Q9UMD9 1497 aaPredicted RBP22.66■■□□□ 1.22
PGAP3-207ENST00000580898 ATP10BO94823 1461 aa22.64■■□□□ 1.21
PGAP3-207ENST00000580898 RAPGEF6Q8TEU7 1601 aa22.64■■□□□ 1.21
PGAP3-207ENST00000580898 ARID3CA6NKF2 412 aa22.62■■□□□ 1.21
PGAP3-207ENST00000580898 KIF21BO75037 1637 aa22.6■■□□□ 1.21
PGAP3-207ENST00000580898 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.6■■□□□ 1.21
PGAP3-207ENST00000580898 HNRNPUL2Q1KMD3 747 aaKnown RBP22.6■■□□□ 1.21
PGAP3-207ENST00000580898 RANGAP1P46060 587 aaPredicted RBP22.59■■□□□ 1.21
PGAP3-207ENST00000580898 ADGRL1O94910 1474 aa22.58■■□□□ 1.2
PGAP3-207ENST00000580898 EFCAB5A4FU69 1503 aa22.57■■□□□ 1.2
PGAP3-207ENST00000580898 FHOD3Q2V2M9 1422 aa22.56■■□□□ 1.2
PGAP3-207ENST00000580898 PHLDB1Q86UU1 1377 aa22.54■■□□□ 1.2
PGAP3-207ENST00000580898 ABCA9Q8IUA7 1624 aa22.54■■□□□ 1.2
PGAP3-207ENST00000580898 NUP153P49790 1475 aaKnown RBP22.53■■□□□ 1.2
PGAP3-207ENST00000580898 ARAP3Q8WWN8 1544 aa22.51■■□□□ 1.19
PGAP3-207ENST00000580898 PLEKHD1A6NEE1 506 aa22.47■■□□□ 1.19
PGAP3-207ENST00000580898 UBTFP17480 764 aaKnown RBP22.46■■□□□ 1.19
PGAP3-207ENST00000580898 NEO1Q92859 1461 aa22.46■■□□□ 1.19
PGAP3-207ENST00000580898 CHIC1Q5VXU3 224 aa22.45■■□□□ 1.18
PGAP3-207ENST00000580898 FMN1Q68DA7 1419 aa22.39■■□□□ 1.17
PGAP3-207ENST00000580898 EHMT2Q96KQ7 1210 aa22.37■■□□□ 1.17
PGAP3-207ENST00000580898 CFAP74Q9C0B2 1584 aa22.36■■□□□ 1.17
PGAP3-207ENST00000580898 RAPGEF3O95398 923 aa22.33■■□□□ 1.17
PGAP3-207ENST00000580898 HECW1Q76N89 1606 aa22.32■■□□□ 1.16
PGAP3-207ENST00000580898 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.31■■□□□ 1.16
PGAP3-207ENST00000580898 FANCAO15360 1455 aa22.31■■□□□ 1.16
PGAP3-207ENST00000580898 ATP1B4Q9UN42 357 aaPredicted RBP22.31■■□□□ 1.16
PGAP3-207ENST00000580898 ARHGAP35Q9NRY4 1499 aa22.3■■□□□ 1.16
PGAP3-207ENST00000580898 CDK11AQ9UQ88 783 aaPredicted RBP22.3■■□□□ 1.16
PGAP3-207ENST00000580898 CDK13Q14004 1512 aaKnown RBP22.3■■□□□ 1.16
PGAP3-207ENST00000580898 DENND4BO75064 1496 aaPredicted RBP22.29■■□□□ 1.16
PGAP3-207ENST00000580898 AKNAQ7Z591 1439 aa22.29■■□□□ 1.16
PGAP3-207ENST00000580898 FRMPD1Q5SYB0 1578 aa22.27■■□□□ 1.16
PGAP3-207ENST00000580898 TTC37Q6PGP7 1564 aa22.26■■□□□ 1.15
PGAP3-207ENST00000580898 HECW2Q9P2P5 1572 aa22.23■■□□□ 1.15
PGAP3-207ENST00000580898 ARID4BQ4LE39 1312 aaPredicted RBP22.23■■□□□ 1.15
PGAP3-207ENST00000580898 ARHGEF40Q8TER5 1519 aa22.21■■□□□ 1.15
PGAP3-207ENST00000580898 PLCH2O75038 1416 aa22.21■■□□□ 1.15
PGAP3-207ENST00000580898 RICTORQ6R327 1708 aa22.2■■□□□ 1.14
PGAP3-207ENST00000580898 CLIP1P30622 1438 aa22.2■■□□□ 1.14
PGAP3-207ENST00000580898 ADAMTSL3P82987 1691 aa22.17■■□□□ 1.14
PGAP3-207ENST00000580898 KIF14Q15058 1648 aa22.17■■□□□ 1.14
PGAP3-207ENST00000580898 ZMYM4Q5VZL5 1548 aa22.17■■□□□ 1.14
PGAP3-207ENST00000580898 MAGI2Q86UL8 1455 aa22.16■■□□□ 1.14
PGAP3-207ENST00000580898 TROQ12816 1431 aaPredicted RBP22.15■■□□□ 1.14
PGAP3-207ENST00000580898 BCORL1Q5H9F3 1711 aa22.15■■□□□ 1.14
PGAP3-207ENST00000580898 EFCAB2Q5VUJ9 269 aa22.15■■□□□ 1.14
PGAP3-207ENST00000580898 PTPRMP28827 1452 aa22.15■■□□□ 1.14
PGAP3-207ENST00000580898 POGZQ7Z3K3 1410 aa22.14■■□□□ 1.14
PGAP3-207ENST00000580898 MYO5CQ9NQX4 1742 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms