RNA–Protein interactions for RNA: ENST00000580898.5

PGAP3-207, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 4

Gene PGAP3, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-207ENST00000580898 NISCHQ9Y2I1 1504 aa33.76■■■■□ 3
PGAP3-207ENST00000580898 CCDC180Q9P1Z9 1646 aa30.29■■■□□ 2.44
PGAP3-207ENST00000580898 ABCC9O60706 1549 aa30.13■■■□□ 2.41
PGAP3-207ENST00000580898 RB1CC1Q8TDY2 1594 aa28.8■■■□□ 2.2
PGAP3-207ENST00000580898 NACADO15069 1562 aa28.62■■■□□ 2.17
PGAP3-207ENST00000580898 DCAF8L2P0C7V8 631 aa28.46■■■□□ 2.15
PGAP3-207ENST00000580898 MYO15BQ96JP2 1530 aa28.28■■■□□ 2.12
PGAP3-207ENST00000580898 DNAJC5BQ9UF47 199 aa28.06■■■□□ 2.08
PGAP3-207ENST00000580898 PABPN1Q86U42 306 aaKnown RBP eCLIP28.04■■■□□ 2.08
PGAP3-207ENST00000580898 ZCCHC6Q5VYS8 1495 aaKnown RBP28.01■■■□□ 2.07
PGAP3-207ENST00000580898 UNC13AQ9UPW8 1703 aa28.01■■■□□ 2.07
PGAP3-207ENST00000580898 DCAF1Q9Y4B6 1507 aa27.94■■■□□ 2.06
PGAP3-207ENST00000580898 BICRAQ9NZM4 1560 aa27.84■■■□□ 2.05
PGAP3-207ENST00000580898 SHROOM4Q9ULL8 1493 aa27.65■■■□□ 2.02
PGAP3-207ENST00000580898 SCRIBQ14160 1630 aa27.56■■■□□ 2
PGAP3-207ENST00000580898 CC2D2AQ9P2K1 1620 aa27.23■■□□□ 1.95
PGAP3-207ENST00000580898 EIF4G1Q04637 1599 aaKnown RBP27.21■■□□□ 1.95
PGAP3-207ENST00000580898 CECR2Q9BXF3 1484 aa27.16■■□□□ 1.94
PGAP3-207ENST00000580898 NCAPD3P42695 1498 aa26.4■■□□□ 1.82
PGAP3-207ENST00000580898 SMARCA2P51531 1590 aa26.31■■□□□ 1.8
PGAP3-207ENST00000580898 SMARCA4P51532 1647 aa26.31■■□□□ 1.8
PGAP3-207ENST00000580898 ATAD2BQ9ULI0 1458 aa26.3■■□□□ 1.8
PGAP3-207ENST00000580898 BAZ1AQ9NRL2 1556 aaPredicted RBP26.24■■□□□ 1.79
PGAP3-207ENST00000580898 HMGXB3Q12766 1538 aa26.24■■□□□ 1.79
PGAP3-207ENST00000580898 BAZ1BQ9UIG0 1483 aaKnown RBP26.11■■□□□ 1.77
PGAP3-207ENST00000580898 ERCC6Q03468 1493 aa26.1■■□□□ 1.77
PGAP3-207ENST00000580898 PEG3Q9GZU2 1588 aa26.07■■□□□ 1.76
PGAP3-207ENST00000580898 CUX2O14529 1486 aa26.01■■□□□ 1.75
PGAP3-207ENST00000580898 MROH2BQ7Z745 1585 aa25.97■■□□□ 1.75
PGAP3-207ENST00000580898 NESP48681 1621 aa25.87■■□□□ 1.73
PGAP3-207ENST00000580898 LAMC3Q9Y6N6 1575 aa25.82■■□□□ 1.72
PGAP3-207ENST00000580898 DNAJC5Q9H3Z4 198 aa25.81■■□□□ 1.72
PGAP3-207ENST00000580898 PDS5BQ9NTI5 1447 aa25.69■■□□□ 1.7
PGAP3-207ENST00000580898 WIZO95785 1651 aa25.65■■□□□ 1.7
PGAP3-207ENST00000580898 THOC2Q8NI27 1593 aaKnown RBP25.63■■□□□ 1.69
PGAP3-207ENST00000580898 CADPSQ9ULU8 1353 aa25.6■■□□□ 1.69
PGAP3-207ENST00000580898 KIF21AQ7Z4S6 1674 aa25.56■■□□□ 1.68
PGAP3-207ENST00000580898 RSF1Q96T23 1441 aaPredicted RBP25.48■■□□□ 1.67
PGAP3-207ENST00000580898 MRC2Q9UBG0 1479 aa25.42■■□□□ 1.66
PGAP3-207ENST00000580898 TOP2AP11388 1531 aaKnown RBP25.41■■□□□ 1.66
PGAP3-207ENST00000580898 CEP164Q9UPV0 1460 aa25.36■■□□□ 1.65
PGAP3-207ENST00000580898 WDR62O43379 1518 aa25.34■■□□□ 1.65
PGAP3-207ENST00000580898 CFTRP13569 1480 aa25.33■■□□□ 1.65
PGAP3-207ENST00000580898 FANCD2Q9BXW9 1451 aa25.31■■□□□ 1.64
PGAP3-207ENST00000580898 PRDM2Q13029 1718 aa25.08■■□□□ 1.61
PGAP3-207ENST00000580898 CCDC88BA6NC98 1476 aa25.08■■□□□ 1.6
PGAP3-207ENST00000580898 URB2Q14146 1524 aaKnown RBP25.05■■□□□ 1.6
PGAP3-207ENST00000580898 ABCC8Q09428 1581 aa24.88■■□□□ 1.57
PGAP3-207ENST00000580898 IFT140Q96RY7 1462 aa24.85■■□□□ 1.57
PGAP3-207ENST00000580898 TOPBP1Q92547 1522 aa24.82■■□□□ 1.56
PGAP3-207ENST00000580898 OSCARQ8IYS5 282 aa24.82■■□□□ 1.56
PGAP3-207ENST00000580898 DNMBPQ6XZF7 1577 aa24.77■■□□□ 1.56
PGAP3-207ENST00000580898 TRIM41Q8WV44 630 aa24.73■■□□□ 1.55
PGAP3-207ENST00000580898 ZNF608Q9ULD9 1512 aaPredicted RBP24.7■■□□□ 1.54
PGAP3-207ENST00000580898 EIF4G3O43432 1585 aaKnown RBP24.63■■□□□ 1.53
PGAP3-207ENST00000580898 POLA1P09884 1462 aaPredicted RBP24.58■■□□□ 1.52
PGAP3-207ENST00000580898 TARBP1Q13395 1621 aaKnown RBP24.57■■□□□ 1.52
PGAP3-207ENST00000580898 AQRO60306 1485 aaKnown RBP eCLIP24.51■■□□□ 1.51
PGAP3-207ENST00000580898 SOGA1O94964 1423 aa24.49■■□□□ 1.51
PGAP3-207ENST00000580898 SUPT5HO00267 1087 aaKnown RBP24.45■■□□□ 1.5
PGAP3-207ENST00000580898 WDR97A6NE52 1622 aa24.45■■□□□ 1.5
PGAP3-207ENST00000580898 RAD54L2Q9Y4B4 1467 aa24.45■■□□□ 1.5
PGAP3-207ENST00000580898 FGD5Q6ZNL6 1462 aa24.44■■□□□ 1.5
PGAP3-207ENST00000580898 RIMBP3CA6NJZ7 1639 aa24.43■■□□□ 1.5
PGAP3-207ENST00000580898 RIMBP3BA6NNM3 1639 aa24.43■■□□□ 1.5
PGAP3-207ENST00000580898 RIMBP3Q9UFD9 1639 aa24.43■■□□□ 1.5
PGAP3-207ENST00000580898 CUX1P39880 1505 aa24.4■■□□□ 1.5
PGAP3-207ENST00000580898 FBLN2P98095 1184 aa24.39■■□□□ 1.49
PGAP3-207ENST00000580898 TDRD9Q8NDG6 1382 aaKnown RBP24.39■■□□□ 1.49
PGAP3-207ENST00000580898 CHD1O14646 1710 aa24.38■■□□□ 1.49
PGAP3-207ENST00000580898 ARHGEF11O15085 1522 aa24.38■■□□□ 1.49
PGAP3-207ENST00000580898 SNAPC4Q5SXM2 1469 aa24.31■■□□□ 1.48
PGAP3-207ENST00000580898 GRIN2BQ13224 1484 aa24.29■■□□□ 1.48
PGAP3-207ENST00000580898 MAGI1Q96QZ7 1491 aaPredicted RBP24.29■■□□□ 1.48
PGAP3-207ENST00000580898 CHMP7Q8WUX9 453 aaPredicted RBP24.26■■□□□ 1.47
PGAP3-207ENST00000580898 SYNJ1O43426 1573 aa24.2■■□□□ 1.47
PGAP3-207ENST00000580898 GAPVD1Q14C86 1478 aa24.2■■□□□ 1.47
PGAP3-207ENST00000580898 CYB5RLQ6IPT4 315 aa24.2■■□□□ 1.46
PGAP3-207ENST00000580898 ABCA10Q8WWZ4 1543 aa24.2■■□□□ 1.46
PGAP3-207ENST00000580898 SYNJ2O15056 1496 aa24.19■■□□□ 1.46
PGAP3-207ENST00000580898 PBRM1Q86U86 1689 aa24.15■■□□□ 1.46
PGAP3-207ENST00000580898 WRNQ14191 1432 aaPredicted RBP eCLIP24.15■■□□□ 1.46
PGAP3-207ENST00000580898 CLASP1Q7Z460 1538 aa24.14■■□□□ 1.45
PGAP3-207ENST00000580898 ARAP1Q96P48 1450 aa24.13■■□□□ 1.45
PGAP3-207ENST00000580898 ABCA5Q8WWZ7 1642 aa24.12■■□□□ 1.45
PGAP3-207ENST00000580898 TOP2BQ02880 1626 aa24.08■■□□□ 1.45
PGAP3-207ENST00000580898 BIVM-ERCC5R4GMW8 1640 aa24.07■■□□□ 1.44
PGAP3-207ENST00000580898 GRIN2AQ12879 1464 aa23.95■■□□□ 1.42
PGAP3-207ENST00000580898 TRHP20396 242 aaPredicted RBP23.95■■□□□ 1.42
PGAP3-207ENST00000580898 ADAMTS12P58397 1594 aa23.95■■□□□ 1.42
PGAP3-207ENST00000580898 FHAD1B1AJZ9 1412 aa23.92■■□□□ 1.42
PGAP3-207ENST00000580898 ERICH3Q5RHP9 1530 aa23.91■■□□□ 1.42
PGAP3-207ENST00000580898 NUP160Q12769 1436 aa23.86■■□□□ 1.41
PGAP3-207ENST00000580898 CEP170Q5SW79 1584 aa23.82■■□□□ 1.4
PGAP3-207ENST00000580898 SHROOM2Q13796 1616 aa23.73■■□□□ 1.39
PGAP3-207ENST00000580898 ERCC6L2Q5T890 1561 aa23.69■■□□□ 1.38
PGAP3-207ENST00000580898 KIF27Q86VH2 1401 aa23.67■■□□□ 1.38
PGAP3-207ENST00000580898 PRG4Q92954 1404 aaPredicted RBP23.63■■□□□ 1.37
PGAP3-207ENST00000580898 JPH4Q96JJ6 628 aa23.63■■□□□ 1.37
PGAP3-207ENST00000580898 RUSC2Q8N2Y8 1516 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 242.5 ms