RNA–Protein interactions for RNA: ENST00000580840.1

TEFM-204, Transcript of transcription elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TEFM, Length 2,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TEFM-204ENST00000580840 PODXL2Q9NZ53 605 aa11.31□□□□□ -0.6
TEFM-204ENST00000580840 PPP1R15AO75807 674 aaPredicted RBP11.3□□□□□ -0.6
TEFM-204ENST00000580840 RTN4Q9NQC3 1192 aaKnown RBP11.3□□□□□ -0.6
TEFM-204ENST00000580840 VPS8Q8N3P4 1428 aa11.3□□□□□ -0.6
TEFM-204ENST00000580840 TIMELESSQ9UNS1 1208 aa11.29□□□□□ -0.6
TEFM-204ENST00000580840 PPM1GO15355 546 aaPredicted RBP11.28□□□□□ -0.6
TEFM-204ENST00000580840 MROH2BQ7Z745 1585 aa11.27□□□□□ -0.6
TEFM-204ENST00000580840 TRIM52Q96A61 297 aa11.27□□□□□ -0.61
TEFM-204ENST00000580840 CEP164Q9UPV0 1460 aa11.26□□□□□ -0.61
TEFM-204ENST00000580840 WIZO95785 1651 aa11.26□□□□□ -0.61
TEFM-204ENST00000580840 FAM43AQ8N2R8 423 aa11.24□□□□□ -0.61
TEFM-204ENST00000580840 DDX10Q13206 875 aaKnown RBP11.23□□□□□ -0.61
TEFM-204ENST00000580840 UBTFP17480 764 aaKnown RBP11.23□□□□□ -0.61
TEFM-204ENST00000580840 CLIP1P30622 1438 aa11.23□□□□□ -0.61
TEFM-204ENST00000580840 CCDC88BA6NC98 1476 aa11.21□□□□□ -0.61
TEFM-204ENST00000580840 KIF21BO75037 1637 aa11.21□□□□□ -0.62
TEFM-204ENST00000580840 CECR2Q9BXF3 1484 aa11.2□□□□□ -0.62
TEFM-204ENST00000580840 ABCC8Q09428 1581 aa11.2□□□□□ -0.62
TEFM-204ENST00000580840 BAZ1BQ9UIG0 1483 aaKnown RBP11.2□□□□□ -0.62
TEFM-204ENST00000580840 NEFMP07197 916 aa11.2□□□□□ -0.62
TEFM-204ENST00000580840 ZMYND15Q9H091 742 aa11.2□□□□□ -0.62
TEFM-204ENST00000580840 RRBP1Q9P2E9 1410 aaKnown RBP11.19□□□□□ -0.62
TEFM-204ENST00000580840 GSE1Q14687 1217 aa11.18□□□□□ -0.62
TEFM-204ENST00000580840 SMARCA2P51531 1590 aa11.17□□□□□ -0.62
TEFM-204ENST00000580840 TOP2AP11388 1531 aaKnown RBP11.17□□□□□ -0.62
TEFM-204ENST00000580840 NCAPD3P42695 1498 aa11.17□□□□□ -0.62
TEFM-204ENST00000580840 SOGA1O94964 1423 aa11.16□□□□□ -0.62
TEFM-204ENST00000580840 RRP9O43818 475 aaKnown RBP11.15□□□□□ -0.62
TEFM-204ENST00000580840 HNRNPUQ00839 825 aaKnown RBP eCLIP11.15□□□□□ -0.62
TEFM-204ENST00000580840 PLEKHG5O94827 1062 aa11.14□□□□□ -0.63
TEFM-204ENST00000580840 VSIG10Q8N0Z9 540 aa11.14□□□□□ -0.63
TEFM-204ENST00000580840 BRPF3Q9ULD4 1205 aa11.14□□□□□ -0.63
TEFM-204ENST00000580840 MAPKBP1O60336 1514 aa11.13□□□□□ -0.63
TEFM-204ENST00000580840 IRX6P78412 446 aaPredicted RBP11.12□□□□□ -0.63
TEFM-204ENST00000580840 B4GALNT3Q6L9W6 998 aa11.12□□□□□ -0.63
TEFM-204ENST00000580840 WDR97A6NE52 1622 aa11.11□□□□□ -0.63
TEFM-204ENST00000580840 DDRGK1Q96HY6 314 aa11.1□□□□□ -0.63
TEFM-204ENST00000580840 ZBED9Q6R2W3 1325 aa11.09□□□□□ -0.63
TEFM-204ENST00000580840 TCERG1O14776 1098 aaKnown RBP11.06□□□□□ -0.64
TEFM-204ENST00000580840 HSP90AA2PQ14568 343 aaPredicted RBP11.06□□□□□ -0.64
TEFM-204ENST00000580840 PEG3Q9GZU2 1588 aa11.06□□□□□ -0.64
TEFM-204ENST00000580840 MS4A1P11836 297 aa11.06□□□□□ -0.64
TEFM-204ENST00000580840 RNF123Q5XPI4 1314 aa11.06□□□□□ -0.64
TEFM-204ENST00000580840 RUSC2Q8N2Y8 1516 aa11.05□□□□□ -0.64
TEFM-204ENST00000580840 CCNB3Q8WWL7 1395 aa11.04□□□□□ -0.64
TEFM-204ENST00000580840 SMG6Q86US8 1419 aaKnown RBP11.03□□□□□ -0.64
TEFM-204ENST00000580840 HSP90AA1P07900 732 aaKnown RBP11.02□□□□□ -0.64
TEFM-204ENST00000580840 RAB3GAP2Q9H2M9 1393 aa11.02□□□□□ -0.65
TEFM-204ENST00000580840 CENPJQ9HC77 1338 aaPredicted RBP11.02□□□□□ -0.65
TEFM-204ENST00000580840 FRAT1Q92837 279 aaPredicted RBP11.01□□□□□ -0.65
TEFM-204ENST00000580840 LAS1LQ9Y4W2 734 aaKnown RBP11.01□□□□□ -0.65
TEFM-204ENST00000580840 SETD5Q9C0A6 1442 aa11□□□□□ -0.65
TEFM-204ENST00000580840 NFKBIBQ15653 356 aa10.99□□□□□ -0.65
TEFM-204ENST00000580840 SMARCA4P51532 1647 aa10.98□□□□□ -0.65
TEFM-204ENST00000580840 L1TD1Q5T7N2 865 aaKnown RBP10.97□□□□□ -0.65
TEFM-204ENST00000580840 BACH2Q9BYV9 841 aa10.97□□□□□ -0.65
TEFM-204ENST00000580840 FHAD1B1AJZ9 1412 aa10.97□□□□□ -0.65
TEFM-204ENST00000580840 FGD1P98174 961 aa10.96□□□□□ -0.65
TEFM-204ENST00000580840 PPP6R1Q9UPN7 881 aa10.96□□□□□ -0.66
TEFM-204ENST00000580840 SYNJ1O43426 1573 aa10.95□□□□□ -0.66
TEFM-204ENST00000580840 PDE4AP27815 886 aa10.95□□□□□ -0.66
TEFM-204ENST00000580840 AAMPQ13685 434 aa10.95□□□□□ -0.66
TEFM-204ENST00000580840 CALD1Q05682 793 aaKnown RBP10.94□□□□□ -0.66
TEFM-204ENST00000580840 NCOA2Q15596 1464 aa10.93□□□□□ -0.66
TEFM-204ENST00000580840 CLCN1P35523 988 aa10.93□□□□□ -0.66
TEFM-204ENST00000580840 RBM10P98175 930 aaKnown RBP10.93□□□□□ -0.66
TEFM-204ENST00000580840 PNNQ9H307 717 aaKnown RBP10.93□□□□□ -0.66
TEFM-204ENST00000580840 NUDCQ9Y266 331 aa10.93□□□□□ -0.66
TEFM-204ENST00000580840 MAP3K1Q13233 1512 aa10.92□□□□□ -0.66
TEFM-204ENST00000580840 ERICH3Q5RHP9 1530 aa10.92□□□□□ -0.66
TEFM-204ENST00000580840 CACNB1Q02641 598 aaPredicted RBP10.91□□□□□ -0.66
TEFM-204ENST00000580840 PDCL3Q9H2J4 239 aa10.91□□□□□ -0.66
TEFM-204ENST00000580840 CNTLNQ9NXG0 1405 aa10.9□□□□□ -0.66
TEFM-204ENST00000580840 PDE4CQ08493 712 aa10.9□□□□□ -0.66
TEFM-204ENST00000580840 NPM2Q86SE8 214 aaKnown RBP10.9□□□□□ -0.66
TEFM-204ENST00000580840 ARAP1Q96P48 1450 aa10.9□□□□□ -0.67
TEFM-204ENST00000580840 NAP1L5Q96NT1 182 aaPredicted RBP10.9□□□□□ -0.67
TEFM-204ENST00000580840 RAPGEF2Q9Y4G8 1499 aa10.89□□□□□ -0.67
TEFM-204ENST00000580840 RRAGDQ9NQL2 400 aaPredicted RBP10.89□□□□□ -0.67
TEFM-204ENST00000580840 TPM2P07951 284 aa10.88□□□□□ -0.67
TEFM-204ENST00000580840 DCAF11Q8TEB1 546 aa10.88□□□□□ -0.67
TEFM-204ENST00000580840 TONSLQ96HA7 1378 aa10.88□□□□□ -0.67
TEFM-204ENST00000580840 KANK4Q5T7N3 995 aaPredicted RBP10.87□□□□□ -0.67
TEFM-204ENST00000580840 SIN3AQ96ST3 1273 aa10.87□□□□□ -0.67
TEFM-204ENST00000580840 PRKRIP1Q9H875 184 aaPredicted RBP10.85□□□□□ -0.67
TEFM-204ENST00000580840 AKNAQ7Z591 1439 aa10.84□□□□□ -0.67
TEFM-204ENST00000580840 MAP7D2Q96T17 732 aa10.84□□□□□ -0.67
TEFM-204ENST00000580840 MRS2Q9HD23 443 aa10.84□□□□□ -0.67
TEFM-204ENST00000580840 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.83□□□□□ -0.68
TEFM-204ENST00000580840 ADRA2BP18089 450 aa10.82□□□□□ -0.68
TEFM-204ENST00000580840 NCLP19338 710 aaKnown RBP10.82□□□□□ -0.68
TEFM-204ENST00000580840 PRDM4Q9UKN5 801 aa10.82□□□□□ -0.68
TEFM-204ENST00000580840 HIRIP3Q9BW71 556 aaPredicted RBP10.81□□□□□ -0.68
TEFM-204ENST00000580840 PDIA4P13667 645 aaKnown RBP10.81□□□□□ -0.68
TEFM-204ENST00000580840 FAM9BQ8IZU0 186 aa10.81□□□□□ -0.68
TEFM-204ENST00000580840 ABCA5Q8WWZ7 1642 aa10.8□□□□□ -0.68
TEFM-204ENST00000580840 A0A0U1RQG5 324 aaPredicted RBP10.79□□□□□ -0.68
TEFM-204ENST00000580840 PRXQ9BXM0 1461 aa10.78□□□□□ -0.68
TEFM-204ENST00000580840 FRAT2O75474 233 aaPredicted RBP10.78□□□□□ -0.68
TEFM-204ENST00000580840 TERF1P54274 439 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms