RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 KIAA0586Q9BVV6 1533 aa18.44■□□□□ 0.54
NDEL1-208ENST00000580237 PRG4Q92954 1404 aaPredicted RBP18.43■□□□□ 0.54
NDEL1-208ENST00000580237 RAPGEF2Q9Y4G8 1499 aa18.41■□□□□ 0.54
NDEL1-208ENST00000580237 IQGAP2Q13576 1575 aa18.4■□□□□ 0.54
NDEL1-208ENST00000580237 CTTNBP2Q8WZ74 1663 aa18.39■□□□□ 0.53
NDEL1-208ENST00000580237 JPH4Q96JJ6 628 aa18.39■□□□□ 0.53
NDEL1-208ENST00000580237 TRHP20396 242 aaPredicted RBP18.29■□□□□ 0.52
NDEL1-208ENST00000580237 EEA1Q15075 1411 aa18.28■□□□□ 0.52
NDEL1-208ENST00000580237 CARMIL2Q6F5E8 1435 aa18.28■□□□□ 0.52
NDEL1-208ENST00000580237 PRXQ9BXM0 1461 aa18.27■□□□□ 0.52
NDEL1-208ENST00000580237 KIAA0556O60303 1618 aa18.23■□□□□ 0.51
NDEL1-208ENST00000580237 UGGT2Q9NYU1 1516 aa18.23■□□□□ 0.51
NDEL1-208ENST00000580237 ADCY10Q96PN6 1610 aa18.22■□□□□ 0.51
NDEL1-208ENST00000580237 TTBK1Q5TCY1 1321 aaPredicted RBP18.22■□□□□ 0.51
NDEL1-208ENST00000580237 CSRNP3Q8WYN3 585 aa18.2■□□□□ 0.5
NDEL1-208ENST00000580237 TNIKQ9UKE5 1360 aa18.19■□□□□ 0.5
NDEL1-208ENST00000580237 CHIC1Q5VXU3 224 aa18.19■□□□□ 0.5
NDEL1-208ENST00000580237 DISP1Q96F81 1524 aa18.18■□□□□ 0.5
NDEL1-208ENST00000580237 PTPRGP23470 1445 aa18.18■□□□□ 0.5
NDEL1-208ENST00000580237 FAM9AQ8IZU1 332 aaPredicted RBP18.18■□□□□ 0.5
NDEL1-208ENST00000580237 GOLGA3Q08378 1498 aa18.16■□□□□ 0.5
NDEL1-208ENST00000580237 KIF21BO75037 1637 aa18.16■□□□□ 0.5
NDEL1-208ENST00000580237 NPM1P06748 294 aaKnown RBP eCLIP18.14■□□□□ 0.49
NDEL1-208ENST00000580237 KIF13AQ9H1H9 1805 aa18.12■□□□□ 0.49
NDEL1-208ENST00000580237 MAPKBP1O60336 1514 aa18.11■□□□□ 0.49
NDEL1-208ENST00000580237 ABCC2Q92887 1545 aa18.08■□□□□ 0.49
NDEL1-208ENST00000580237 UACAQ9BZF9 1416 aa18.06■□□□□ 0.48
NDEL1-208ENST00000580237 UHRF1BP1LA0JNW5 1464 aa18.05■□□□□ 0.48
NDEL1-208ENST00000580237 SAMD9Q5K651 1589 aa18.04■□□□□ 0.48
NDEL1-208ENST00000580237 DIP2BQ9P265 1576 aa18.04■□□□□ 0.48
NDEL1-208ENST00000580237 ZCCHC11Q5TAX3 1644 aaKnown RBP18.02■□□□□ 0.48
NDEL1-208ENST00000580237 ABCC10Q5T3U5 1492 aa18.01■□□□□ 0.47
NDEL1-208ENST00000580237 RANGAP1P46060 587 aaPredicted RBP17.99■□□□□ 0.47
NDEL1-208ENST00000580237 EHMT2Q96KQ7 1210 aa17.99■□□□□ 0.47
NDEL1-208ENST00000580237 PLB1Q6P1J6 1458 aa17.99■□□□□ 0.47
NDEL1-208ENST00000580237 TSPOAP1O95153 1857 aa17.99■□□□□ 0.47
NDEL1-208ENST00000580237 ABCA8O94911 1581 aa17.98■□□□□ 0.47
NDEL1-208ENST00000580237 KDM5BQ9UGL1 1544 aa17.97■□□□□ 0.47
NDEL1-208ENST00000580237 P3H3Q8IVL6 736 aa17.96■□□□□ 0.47
NDEL1-208ENST00000580237 EFCAB5A4FU69 1503 aa17.96■□□□□ 0.47
NDEL1-208ENST00000580237 ASXL2Q76L83 1435 aa17.96■□□□□ 0.47
NDEL1-208ENST00000580237 FAM69CQ0P6D2 419 aa17.95■□□□□ 0.46
NDEL1-208ENST00000580237 UBTFP17480 764 aaKnown RBP17.94■□□□□ 0.46
NDEL1-208ENST00000580237 RAPGEF6Q8TEU7 1601 aa17.93■□□□□ 0.46
NDEL1-208ENST00000580237 FHOD3Q2V2M9 1422 aa17.9■□□□□ 0.46
NDEL1-208ENST00000580237 WDR7Q9Y4E6 1490 aa17.88■□□□□ 0.45
NDEL1-208ENST00000580237 GLI2P10070 1586 aa17.87■□□□□ 0.45
NDEL1-208ENST00000580237 EPRSP07814 1512 aaKnown RBP17.85■□□□□ 0.45
NDEL1-208ENST00000580237 ARID3CA6NKF2 412 aa17.84■□□□□ 0.45
NDEL1-208ENST00000580237 MAP3K4Q9Y6R4 1608 aa17.83■□□□□ 0.45
NDEL1-208ENST00000580237 KDM6BO15054 1643 aa17.82■□□□□ 0.44
NDEL1-208ENST00000580237 PPRC1Q5VV67 1664 aaKnown RBP17.81■□□□□ 0.44
NDEL1-208ENST00000580237 CFAP43Q8NDM7 1665 aa17.8■□□□□ 0.44
NDEL1-208ENST00000580237 NUP153P49790 1475 aaKnown RBP17.78■□□□□ 0.44
NDEL1-208ENST00000580237 ARHGAP35Q9NRY4 1499 aa17.78■□□□□ 0.44
NDEL1-208ENST00000580237 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.78■□□□□ 0.44
NDEL1-208ENST00000580237 HNRNPUL2Q1KMD3 747 aaKnown RBP17.78■□□□□ 0.44
NDEL1-208ENST00000580237 ATP10BO94823 1461 aa17.77■□□□□ 0.44
NDEL1-208ENST00000580237 HECW1Q76N89 1606 aa17.77■□□□□ 0.44
NDEL1-208ENST00000580237 TEX14Q8IWB6 1497 aa17.75■□□□□ 0.43
NDEL1-208ENST00000580237 FMN1Q68DA7 1419 aa17.75■□□□□ 0.43
NDEL1-208ENST00000580237 KCNH8Q96L42 1107 aa17.73■□□□□ 0.43
NDEL1-208ENST00000580237 ABCA9Q8IUA7 1624 aa17.69■□□□□ 0.42
NDEL1-208ENST00000580237 CDK13Q14004 1512 aaKnown RBP17.69■□□□□ 0.42
NDEL1-208ENST00000580237 CD109Q6YHK3 1445 aa17.69■□□□□ 0.42
NDEL1-208ENST00000580237 ATP1B4Q9UN42 357 aaPredicted RBP17.68■□□□□ 0.42
NDEL1-208ENST00000580237 PCF11O94913 1555 aaKnown RBP17.67■□□□□ 0.42
NDEL1-208ENST00000580237 CLIP1P30622 1438 aa17.67■□□□□ 0.42
NDEL1-208ENST00000580237 MAGI3Q5TCQ9 1506 aa17.66■□□□□ 0.42
NDEL1-208ENST00000580237 LRRIQ1Q96JM4 1722 aa17.64■□□□□ 0.41
NDEL1-208ENST00000580237 PLEKHD1A6NEE1 506 aa17.62■□□□□ 0.41
NDEL1-208ENST00000580237 TTC37Q6PGP7 1564 aa17.59■□□□□ 0.41
NDEL1-208ENST00000580237 KIF14Q15058 1648 aa17.58■□□□□ 0.41
NDEL1-208ENST00000580237 CFAP74Q9C0B2 1584 aa17.58■□□□□ 0.41
NDEL1-208ENST00000580237 CCDC18Q5T9S5 1454 aa17.58■□□□□ 0.41
NDEL1-208ENST00000580237 FYCO1Q9BQS8 1478 aa17.58■□□□□ 0.41
NDEL1-208ENST00000580237 CASKIN1Q8WXD9 1431 aa17.57■□□□□ 0.4
NDEL1-208ENST00000580237 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.57■□□□□ 0.4
NDEL1-208ENST00000580237 CEP162Q5TB80 1403 aa17.56■□□□□ 0.4
NDEL1-208ENST00000580237 MYO5CQ9NQX4 1742 aa17.56■□□□□ 0.4
NDEL1-208ENST00000580237 CDK11AQ9UQ88 783 aaPredicted RBP17.55■□□□□ 0.4
NDEL1-208ENST00000580237 COL17A1Q9UMD9 1497 aaPredicted RBP17.54■□□□□ 0.4
NDEL1-208ENST00000580237 NEO1Q92859 1461 aa17.53■□□□□ 0.4
NDEL1-208ENST00000580237 TROQ12816 1431 aaPredicted RBP17.51■□□□□ 0.39
NDEL1-208ENST00000580237 ARAP3Q8WWN8 1544 aa17.5■□□□□ 0.39
NDEL1-208ENST00000580237 FANCAO15360 1455 aa17.5■□□□□ 0.39
NDEL1-208ENST00000580237 PHLDB1Q86UU1 1377 aa17.49■□□□□ 0.39
NDEL1-208ENST00000580237 AEBP2Q6ZN18 517 aaPredicted RBP17.48■□□□□ 0.39
NDEL1-208ENST00000580237 ARHGAP5Q13017 1502 aa17.44■□□□□ 0.38
NDEL1-208ENST00000580237 LOC105371045A0A1W2PR82 267 aa17.44■□□□□ 0.38
NDEL1-208ENST00000580237 FRMPD1Q5SYB0 1578 aa17.44■□□□□ 0.38
NDEL1-208ENST00000580237 RICTORQ6R327 1708 aa17.44■□□□□ 0.38
NDEL1-208ENST00000580237 PREX2Q70Z35 1606 aa17.43■□□□□ 0.38
NDEL1-208ENST00000580237 AKNAQ7Z591 1439 aa17.42■□□□□ 0.38
NDEL1-208ENST00000580237 PLCH2O75038 1416 aa17.41■□□□□ 0.38
NDEL1-208ENST00000580237 DENND4BO75064 1496 aaPredicted RBP17.41■□□□□ 0.38
NDEL1-208ENST00000580237 ADGRL1O94910 1474 aa17.41■□□□□ 0.38
NDEL1-208ENST00000580237 CDC42BPAQ5VT25 1732 aa17.41■□□□□ 0.38
NDEL1-208ENST00000580237 CDC42BPBQ9Y5S2 1711 aa17.41■□□□□ 0.38
NDEL1-208ENST00000580237 MTUS2Q5JR59 1369 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms