RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 CLASP1Q7Z460 1538 aa25.98■■□□□ 1.75
CSNK1D-212ENST00000580061 KIAA0586Q9BVV6 1533 aa25.95■■□□□ 1.74
CSNK1D-212ENST00000580061 UBTFP17480 764 aaKnown RBP25.92■■□□□ 1.74
CSNK1D-212ENST00000580061 IQGAP2Q13576 1575 aa25.9■■□□□ 1.74
CSNK1D-212ENST00000580061 LOC105371045A0A1W2PR82 267 aa25.9■■□□□ 1.74
CSNK1D-212ENST00000580061 SHROOM2Q13796 1616 aa25.85■■□□□ 1.73
CSNK1D-212ENST00000580061 TNIKQ9UKE5 1360 aa25.83■■□□□ 1.73
CSNK1D-212ENST00000580061 JPH4Q96JJ6 628 aa25.79■■□□□ 1.72
CSNK1D-212ENST00000580061 UGGT2Q9NYU1 1516 aa25.78■■□□□ 1.72
CSNK1D-212ENST00000580061 PRG4Q92954 1404 aaPredicted RBP25.7■■□□□ 1.7
CSNK1D-212ENST00000580061 SAMD9Q5K651 1589 aa25.69■■□□□ 1.7
CSNK1D-212ENST00000580061 DISP1Q96F81 1524 aa25.68■■□□□ 1.7
CSNK1D-212ENST00000580061 ERCC6L2Q5T890 1561 aa25.68■■□□□ 1.7
CSNK1D-212ENST00000580061 RANGAP1P46060 587 aaPredicted RBP25.67■■□□□ 1.7
CSNK1D-212ENST00000580061 KIAA0556O60303 1618 aa25.66■■□□□ 1.7
CSNK1D-212ENST00000580061 EFCAB5A4FU69 1503 aa25.65■■□□□ 1.7
CSNK1D-212ENST00000580061 CARMIL2Q6F5E8 1435 aa25.64■■□□□ 1.7
CSNK1D-212ENST00000580061 ARHGEF11O15085 1522 aa25.63■■□□□ 1.69
CSNK1D-212ENST00000580061 CEP162Q5TB80 1403 aa25.63■■□□□ 1.69
CSNK1D-212ENST00000580061 ARHGAP35Q9NRY4 1499 aa25.61■■□□□ 1.69
CSNK1D-212ENST00000580061 CLIP1P30622 1438 aa25.6■■□□□ 1.69
CSNK1D-212ENST00000580061 RIMBP3CA6NJZ7 1639 aa25.59■■□□□ 1.69
CSNK1D-212ENST00000580061 RIMBP3BA6NNM3 1639 aa25.59■■□□□ 1.69
CSNK1D-212ENST00000580061 RIMBP3Q9UFD9 1639 aa25.59■■□□□ 1.69
CSNK1D-212ENST00000580061 DNAJC5Q9H3Z4 198 aa25.55■■□□□ 1.68
CSNK1D-212ENST00000580061 P3H3Q8IVL6 736 aa25.54■■□□□ 1.68
CSNK1D-212ENST00000580061 FHOD3Q2V2M9 1422 aa25.52■■□□□ 1.68
CSNK1D-212ENST00000580061 ARAP1Q96P48 1450 aa25.48■■□□□ 1.67
CSNK1D-212ENST00000580061 PTPRGP23470 1445 aa25.46■■□□□ 1.67
CSNK1D-212ENST00000580061 TTBK1Q5TCY1 1321 aaPredicted RBP25.41■■□□□ 1.66
CSNK1D-212ENST00000580061 FMN1Q68DA7 1419 aa25.38■■□□□ 1.65
CSNK1D-212ENST00000580061 ABCA8O94911 1581 aa25.35■■□□□ 1.65
CSNK1D-212ENST00000580061 PLB1Q6P1J6 1458 aa25.34■■□□□ 1.65
CSNK1D-212ENST00000580061 CYB5RLQ6IPT4 315 aa25.33■■□□□ 1.65
CSNK1D-212ENST00000580061 RAPGEF6Q8TEU7 1601 aa25.33■■□□□ 1.65
CSNK1D-212ENST00000580061 UACAQ9BZF9 1416 aa25.31■■□□□ 1.64
CSNK1D-212ENST00000580061 VPS8Q8N3P4 1428 aa25.29■■□□□ 1.64
CSNK1D-212ENST00000580061 ABCC2Q92887 1545 aa25.28■■□□□ 1.64
CSNK1D-212ENST00000580061 PCF11O94913 1555 aaKnown RBP25.28■■□□□ 1.64
CSNK1D-212ENST00000580061 ADCY10Q96PN6 1610 aa25.28■■□□□ 1.64
CSNK1D-212ENST00000580061 UHRF1BP1LA0JNW5 1464 aa25.28■■□□□ 1.64
CSNK1D-212ENST00000580061 CASKIN1Q8WXD9 1431 aa25.26■■□□□ 1.63
CSNK1D-212ENST00000580061 HECW1Q76N89 1606 aa25.23■■□□□ 1.63
CSNK1D-212ENST00000580061 FYCO1Q9BQS8 1478 aa25.23■■□□□ 1.63
CSNK1D-212ENST00000580061 NUP153P49790 1475 aaKnown RBP25.21■■□□□ 1.63
CSNK1D-212ENST00000580061 LRRIQ1Q96JM4 1722 aa25.2■■□□□ 1.63
CSNK1D-212ENST00000580061 ATP1B4Q9UN42 357 aaPredicted RBP25.16■■□□□ 1.62
CSNK1D-212ENST00000580061 KDM5BQ9UGL1 1544 aa25.16■■□□□ 1.62
CSNK1D-212ENST00000580061 ZCCHC11Q5TAX3 1644 aaKnown RBP25.15■■□□□ 1.62
CSNK1D-212ENST00000580061 EPRSP07814 1512 aaKnown RBP25.13■■□□□ 1.61
CSNK1D-212ENST00000580061 ATP10BO94823 1461 aa25.13■■□□□ 1.61
CSNK1D-212ENST00000580061 CCDC18Q5T9S5 1454 aa25.1■■□□□ 1.61
CSNK1D-212ENST00000580061 CDK13Q14004 1512 aaKnown RBP25.1■■□□□ 1.61
CSNK1D-212ENST00000580061 ARID3CA6NKF2 412 aa25.09■■□□□ 1.61
CSNK1D-212ENST00000580061 NPM1P06748 294 aaKnown RBP eCLIP25.07■■□□□ 1.6
CSNK1D-212ENST00000580061 CFAP43Q8NDM7 1665 aa25.06■■□□□ 1.6
CSNK1D-212ENST00000580061 TIAM1Q13009 1591 aa25.03■■□□□ 1.6
CSNK1D-212ENST00000580061 MAP3K1Q13233 1512 aa25.02■■□□□ 1.6
CSNK1D-212ENST00000580061 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.02■■□□□ 1.6
CSNK1D-212ENST00000580061 HNRNPUL2Q1KMD3 747 aaKnown RBP25.02■■□□□ 1.6
CSNK1D-212ENST00000580061 MAPKBP1O60336 1514 aa25■■□□□ 1.59
CSNK1D-212ENST00000580061 ASXL2Q76L83 1435 aa24.95■■□□□ 1.59
CSNK1D-212ENST00000580061 APLP2Q06481 763 aa24.95■■□□□ 1.58
CSNK1D-212ENST00000580061 MAGI3Q5TCQ9 1506 aa24.95■■□□□ 1.58
CSNK1D-212ENST00000580061 CDK11AQ9UQ88 783 aaPredicted RBP24.94■■□□□ 1.58
CSNK1D-212ENST00000580061 WDR7Q9Y4E6 1490 aa24.93■■□□□ 1.58
CSNK1D-212ENST00000580061 PLEKHD1A6NEE1 506 aa24.92■■□□□ 1.58
CSNK1D-212ENST00000580061 LRRC9Q6ZRR7 1453 aa24.89■■□□□ 1.58
CSNK1D-212ENST00000580061 TROQ12816 1431 aaPredicted RBP24.89■■□□□ 1.58
CSNK1D-212ENST00000580061 EHBP1L1Q8N3D4 1523 aa24.88■■□□□ 1.57
CSNK1D-212ENST00000580061 MTUS2Q5JR59 1369 aa24.86■■□□□ 1.57
CSNK1D-212ENST00000580061 KANK4Q5T7N3 995 aaPredicted RBP24.86■■□□□ 1.57
CSNK1D-212ENST00000580061 KIF14Q15058 1648 aa24.83■■□□□ 1.56
CSNK1D-212ENST00000580061 DIP2BQ9P265 1576 aa24.81■■□□□ 1.56
CSNK1D-212ENST00000580061 KCNH8Q96L42 1107 aa24.8■■□□□ 1.56
CSNK1D-212ENST00000580061 ABCC10Q5T3U5 1492 aa24.8■■□□□ 1.56
CSNK1D-212ENST00000580061 SUPT6HQ7KZ85 1726 aaKnown RBP24.8■■□□□ 1.56
CSNK1D-212ENST00000580061 KIF13AQ9H1H9 1805 aa24.79■■□□□ 1.56
CSNK1D-212ENST00000580061 GLI2P10070 1586 aa24.77■■□□□ 1.56
CSNK1D-212ENST00000580061 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.76■■□□□ 1.55
CSNK1D-212ENST00000580061 ABCA9Q8IUA7 1624 aa24.75■■□□□ 1.55
CSNK1D-212ENST00000580061 TTC37Q6PGP7 1564 aa24.74■■□□□ 1.55
CSNK1D-212ENST00000580061 NCOA2Q15596 1464 aa24.72■■□□□ 1.55
CSNK1D-212ENST00000580061 PPARGC1BQ86YN6 1023 aaKnown RBP24.72■■□□□ 1.55
CSNK1D-212ENST00000580061 FAM69CQ0P6D2 419 aa24.7■■□□□ 1.54
CSNK1D-212ENST00000580061 MAP3K4Q9Y6R4 1608 aa24.7■■□□□ 1.54
CSNK1D-212ENST00000580061 CDC42BPAQ5VT25 1732 aa24.68■■□□□ 1.54
CSNK1D-212ENST00000580061 MYO5CQ9NQX4 1742 aa24.68■■□□□ 1.54
CSNK1D-212ENST00000580061 ITSN2Q9NZM3 1697 aa24.63■■□□□ 1.53
CSNK1D-212ENST00000580061 PREX2Q70Z35 1606 aa24.63■■□□□ 1.53
CSNK1D-212ENST00000580061 CDC42BPBQ9Y5S2 1711 aa24.63■■□□□ 1.53
CSNK1D-212ENST00000580061 CD109Q6YHK3 1445 aa24.62■■□□□ 1.53
CSNK1D-212ENST00000580061 GPATCH8Q9UKJ3 1502 aaKnown RBP24.62■■□□□ 1.53
CSNK1D-212ENST00000580061 CCNB3Q8WWL7 1395 aa24.62■■□□□ 1.53
CSNK1D-212ENST00000580061 TRHP20396 242 aaPredicted RBP24.61■■□□□ 1.53
CSNK1D-212ENST00000580061 TSPOAP1O95153 1857 aa24.61■■□□□ 1.53
CSNK1D-212ENST00000580061 PHLDB1Q86UU1 1377 aa24.6■■□□□ 1.53
CSNK1D-212ENST00000580061 PLCH2O75038 1416 aa24.6■■□□□ 1.53
CSNK1D-212ENST00000580061 ARAP3Q8WWN8 1544 aa24.59■■□□□ 1.53
CSNK1D-212ENST00000580061 PPRC1Q5VV67 1664 aaKnown RBP24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms