RNA–Protein interactions for RNA: ENST00000579986.6

RTTN-204, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,079 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-204ENST00000579986 ARAP1Q96P48 1450 aa10.29□□□□□ -0.76
RTTN-204ENST00000579986 CEP170Q5SW79 1584 aa10.29□□□□□ -0.76
RTTN-204ENST00000579986 CLIP1P30622 1438 aa10.29□□□□□ -0.76
RTTN-204ENST00000579986 ARHGAP35Q9NRY4 1499 aa10.29□□□□□ -0.76
RTTN-204ENST00000579986 UGGT2Q9NYU1 1516 aa10.28□□□□□ -0.76
RTTN-204ENST00000579986 IQGAP2Q13576 1575 aa10.27□□□□□ -0.77
RTTN-204ENST00000579986 KIAA0586Q9BVV6 1533 aa10.27□□□□□ -0.77
RTTN-204ENST00000579986 CHD1O14646 1710 aa10.26□□□□□ -0.77
RTTN-204ENST00000579986 UBTFP17480 764 aaKnown RBP10.26□□□□□ -0.77
RTTN-204ENST00000579986 SHROOM2Q13796 1616 aa10.24□□□□□ -0.77
RTTN-204ENST00000579986 VPS8Q8N3P4 1428 aa10.24□□□□□ -0.77
RTTN-204ENST00000579986 CLASP1Q7Z460 1538 aa10.21□□□□□ -0.77
RTTN-204ENST00000579986 MAP3K1Q13233 1512 aa10.21□□□□□ -0.78
RTTN-204ENST00000579986 DISP1Q96F81 1524 aa10.2□□□□□ -0.78
RTTN-204ENST00000579986 KIAA0556O60303 1618 aa10.2□□□□□ -0.78
RTTN-204ENST00000579986 EHMT2Q96KQ7 1210 aa10.17□□□□□ -0.78
RTTN-204ENST00000579986 CFAP43Q8NDM7 1665 aa10.16□□□□□ -0.78
RTTN-204ENST00000579986 FYCO1Q9BQS8 1478 aa10.15□□□□□ -0.78
RTTN-204ENST00000579986 CASKIN1Q8WXD9 1431 aa10.15□□□□□ -0.79
RTTN-204ENST00000579986 PCF11O94913 1555 aaKnown RBP10.14□□□□□ -0.79
RTTN-204ENST00000579986 CHMP7Q8WUX9 453 aaPredicted RBP10.14□□□□□ -0.79
RTTN-204ENST00000579986 LRRIQ1Q96JM4 1722 aa10.14□□□□□ -0.79
RTTN-204ENST00000579986 FMN1Q68DA7 1419 aa10.14□□□□□ -0.79
RTTN-204ENST00000579986 FHOD3Q2V2M9 1422 aa10.12□□□□□ -0.79
RTTN-204ENST00000579986 TIAM1Q13009 1591 aa10.11□□□□□ -0.79
RTTN-204ENST00000579986 HECW1Q76N89 1606 aa10.08□□□□□ -0.8
RTTN-204ENST00000579986 ABCA8O94911 1581 aa10.08□□□□□ -0.8
RTTN-204ENST00000579986 RAPGEF6Q8TEU7 1601 aa10.07□□□□□ -0.8
RTTN-204ENST00000579986 CARMIL2Q6F5E8 1435 aa10.06□□□□□ -0.8
RTTN-204ENST00000579986 JPH4Q96JJ6 628 aa10.06□□□□□ -0.8
RTTN-204ENST00000579986 CCDC18Q5T9S5 1454 aa10.06□□□□□ -0.8
RTTN-204ENST00000579986 PRG4Q92954 1404 aaPredicted RBP10.04□□□□□ -0.8
RTTN-204ENST00000579986 LRRC9Q6ZRR7 1453 aa10.04□□□□□ -0.8
RTTN-204ENST00000579986 ERCC6L2Q5T890 1561 aa10.03□□□□□ -0.8
RTTN-204ENST00000579986 ARHGEF11O15085 1522 aa10.03□□□□□ -0.8
RTTN-204ENST00000579986 NUP153P49790 1475 aaKnown RBP10.03□□□□□ -0.8
RTTN-204ENST00000579986 EPRSP07814 1512 aaKnown RBP10.02□□□□□ -0.81
RTTN-204ENST00000579986 UHRF1BP1LA0JNW5 1464 aa10.01□□□□□ -0.81
RTTN-204ENST00000579986 FBLN2P98095 1184 aa10.01□□□□□ -0.81
RTTN-204ENST00000579986 ADCY10Q96PN6 1610 aa10□□□□□ -0.81
RTTN-204ENST00000579986 MAGI3Q5TCQ9 1506 aa10□□□□□ -0.81
RTTN-204ENST00000579986 EHBP1L1Q8N3D4 1523 aa10□□□□□ -0.81
RTTN-204ENST00000579986 RANGAP1P46060 587 aaPredicted RBP9.98□□□□□ -0.81
RTTN-204ENST00000579986 TRIM26Q12899 539 aaPredicted RBP9.98□□□□□ -0.81
RTTN-204ENST00000579986 PLB1Q6P1J6 1458 aa9.98□□□□□ -0.81
RTTN-204ENST00000579986 P3H3Q8IVL6 736 aa9.98□□□□□ -0.81
RTTN-204ENST00000579986 ABCC2Q92887 1545 aa9.97□□□□□ -0.81
RTTN-204ENST00000579986 RRBP1Q9P2E9 1410 aaKnown RBP9.97□□□□□ -0.81
RTTN-204ENST00000579986 KANK4Q5T7N3 995 aaPredicted RBP9.97□□□□□ -0.81
RTTN-204ENST00000579986 SUPT6HQ7KZ85 1726 aaKnown RBP9.96□□□□□ -0.82
RTTN-204ENST00000579986 PTPRGP23470 1445 aa9.95□□□□□ -0.82
RTTN-204ENST00000579986 CDK13Q14004 1512 aaKnown RBP9.95□□□□□ -0.82
RTTN-204ENST00000579986 OSCARQ8IYS5 282 aa9.95□□□□□ -0.82
RTTN-204ENST00000579986 UACAQ9BZF9 1416 aa9.95□□□□□ -0.82
RTTN-204ENST00000579986 KDM5BQ9UGL1 1544 aa9.94□□□□□ -0.82
RTTN-204ENST00000579986 ATP10BO94823 1461 aa9.94□□□□□ -0.82
RTTN-204ENST00000579986 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.93□□□□□ -0.82
RTTN-204ENST00000579986 APLP2Q06481 763 aa9.91□□□□□ -0.82
RTTN-204ENST00000579986 ZCCHC11Q5TAX3 1644 aaKnown RBP9.91□□□□□ -0.82
RTTN-204ENST00000579986 NCOA2Q15596 1464 aa9.9□□□□□ -0.82
RTTN-204ENST00000579986 TROQ12816 1431 aaPredicted RBP9.89□□□□□ -0.83
RTTN-204ENST00000579986 PHLDB1Q86UU1 1377 aa9.89□□□□□ -0.83
RTTN-204ENST00000579986 TCOF1Q13428 1488 aaKnown RBP9.89□□□□□ -0.83
RTTN-204ENST00000579986 ABCC10Q5T3U5 1492 aa9.89□□□□□ -0.83
RTTN-204ENST00000579986 KIF14Q15058 1648 aa9.87□□□□□ -0.83
RTTN-204ENST00000579986 MYOM3Q5VTT5 1437 aa9.86□□□□□ -0.83
RTTN-204ENST00000579986 MIA2Q96PC5 1412 aa9.86□□□□□ -0.83
RTTN-204ENST00000579986 RIMBP3CA6NJZ7 1639 aa9.86□□□□□ -0.83
RTTN-204ENST00000579986 RIMBP3BA6NNM3 1639 aa9.86□□□□□ -0.83
RTTN-204ENST00000579986 RIMBP3Q9UFD9 1639 aa9.86□□□□□ -0.83
RTTN-204ENST00000579986 ITSN2Q9NZM3 1697 aa9.86□□□□□ -0.83
RTTN-204ENST00000579986 MTUS2Q5JR59 1369 aa9.85□□□□□ -0.83
RTTN-204ENST00000579986 FGD6Q6ZV73 1430 aa9.85□□□□□ -0.83
RTTN-204ENST00000579986 PPARGC1BQ86YN6 1023 aaKnown RBP9.85□□□□□ -0.83
RTTN-204ENST00000579986 CDC42BPAQ5VT25 1732 aa9.85□□□□□ -0.83
RTTN-204ENST00000579986 CCNB3Q8WWL7 1395 aa9.85□□□□□ -0.83
RTTN-204ENST00000579986 PTPN23Q9H3S7 1636 aa9.84□□□□□ -0.83
RTTN-204ENST00000579986 PREX2Q70Z35 1606 aa9.83□□□□□ -0.84
RTTN-204ENST00000579986 PCGF6Q9BYE7 350 aa9.82□□□□□ -0.84
RTTN-204ENST00000579986 ARAP3Q8WWN8 1544 aa9.82□□□□□ -0.84
RTTN-204ENST00000579986 CDK11AQ9UQ88 783 aaPredicted RBP9.82□□□□□ -0.84
RTTN-204ENST00000579986 GPATCH8Q9UKJ3 1502 aaKnown RBP9.82□□□□□ -0.84
RTTN-204ENST00000579986 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.81□□□□□ -0.84
RTTN-204ENST00000579986 CDC42BPBQ9Y5S2 1711 aa9.81□□□□□ -0.84
RTTN-204ENST00000579986 MAPKBP1O60336 1514 aa9.8□□□□□ -0.84
RTTN-204ENST00000579986 ABCA9Q8IUA7 1624 aa9.8□□□□□ -0.84
RTTN-204ENST00000579986 TTC37Q6PGP7 1564 aa9.8□□□□□ -0.84
RTTN-204ENST00000579986 CROCC2H7BZ55 1655 aa9.79□□□□□ -0.84
RTTN-204ENST00000579986 DNMT1P26358 1616 aaKnown RBP9.79□□□□□ -0.84
RTTN-204ENST00000579986 WDR7Q9Y4E6 1490 aa9.79□□□□□ -0.84
RTTN-204ENST00000579986 MYO5CQ9NQX4 1742 aa9.79□□□□□ -0.84
RTTN-204ENST00000579986 ATP1B4Q9UN42 357 aaPredicted RBP9.77□□□□□ -0.84
RTTN-204ENST00000579986 AKNAQ7Z591 1439 aa9.77□□□□□ -0.85
RTTN-204ENST00000579986 ARHGEF5Q12774 1597 aa9.77□□□□□ -0.85
RTTN-204ENST00000579986 PLEKHD1A6NEE1 506 aa9.76□□□□□ -0.85
RTTN-204ENST00000579986 GLI2P10070 1586 aa9.75□□□□□ -0.85
RTTN-204ENST00000579986 GCC2Q8IWJ2 1684 aa9.75□□□□□ -0.85
RTTN-204ENST00000579986 CAMSAP2Q08AD1 1489 aa9.75□□□□□ -0.85
RTTN-204ENST00000579986 SAMD9LQ8IVG5 1584 aa9.75□□□□□ -0.85
RTTN-204ENST00000579986 PTPRKQ15262 1439 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms