RNA–Protein interactions for RNA: ENST00000579611.1

CDC42EP4-204, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-204ENST00000579611 PRG4Q92954 1404 aaPredicted RBP29.09■■■□□ 2.25
CDC42EP4-204ENST00000579611 RUSC2Q8N2Y8 1516 aa29.08■■■□□ 2.25
CDC42EP4-204ENST00000579611 KIAA0586Q9BVV6 1533 aa29.08■■■□□ 2.25
CDC42EP4-204ENST00000579611 TRHP20396 242 aaPredicted RBP29■■■□□ 2.23
CDC42EP4-204ENST00000579611 RAPGEF2Q9Y4G8 1499 aa28.88■■■□□ 2.21
CDC42EP4-204ENST00000579611 IQGAP2Q13576 1575 aa28.77■■■□□ 2.2
CDC42EP4-204ENST00000579611 CARMIL2Q6F5E8 1435 aa28.76■■■□□ 2.19
CDC42EP4-204ENST00000579611 PRXQ9BXM0 1461 aa28.73■■■□□ 2.19
CDC42EP4-204ENST00000579611 PTPRGP23470 1445 aa28.72■■■□□ 2.19
CDC42EP4-204ENST00000579611 TNIKQ9UKE5 1360 aa28.71■■■□□ 2.19
CDC42EP4-204ENST00000579611 NPM1P06748 294 aaKnown RBP eCLIP28.68■■■□□ 2.18
CDC42EP4-204ENST00000579611 UGGT2Q9NYU1 1516 aa28.67■■■□□ 2.18
CDC42EP4-204ENST00000579611 DISP1Q96F81 1524 aa28.65■■■□□ 2.18
CDC42EP4-204ENST00000579611 ADCY10Q96PN6 1610 aa28.63■■■□□ 2.17
CDC42EP4-204ENST00000579611 MAPKBP1O60336 1514 aa28.61■■■□□ 2.17
CDC42EP4-204ENST00000579611 CSRNP3Q8WYN3 585 aa28.61■■■□□ 2.17
CDC42EP4-204ENST00000579611 EEA1Q15075 1411 aa28.58■■■□□ 2.17
CDC42EP4-204ENST00000579611 UHRF1BP1LA0JNW5 1464 aa28.54■■■□□ 2.16
CDC42EP4-204ENST00000579611 ABCC10Q5T3U5 1492 aa28.54■■■□□ 2.16
CDC42EP4-204ENST00000579611 UACAQ9BZF9 1416 aa28.52■■■□□ 2.16
CDC42EP4-204ENST00000579611 ABCC2Q92887 1545 aa28.51■■■□□ 2.15
CDC42EP4-204ENST00000579611 KIAA0556O60303 1618 aa28.5■■■□□ 2.15
CDC42EP4-204ENST00000579611 TTBK1Q5TCY1 1321 aaPredicted RBP28.49■■■□□ 2.15
CDC42EP4-204ENST00000579611 GOLGA3Q08378 1498 aa28.47■■■□□ 2.15
CDC42EP4-204ENST00000579611 FAM69CQ0P6D2 419 aa28.47■■■□□ 2.15
CDC42EP4-204ENST00000579611 CTTNBP2Q8WZ74 1663 aa28.46■■■□□ 2.15
CDC42EP4-204ENST00000579611 KIF13AQ9H1H9 1805 aa28.43■■■□□ 2.14
CDC42EP4-204ENST00000579611 CHIC1Q5VXU3 224 aa28.42■■■□□ 2.14
CDC42EP4-204ENST00000579611 DIP2BQ9P265 1576 aa28.41■■■□□ 2.14
CDC42EP4-204ENST00000579611 KDM5BQ9UGL1 1544 aa28.38■■■□□ 2.13
CDC42EP4-204ENST00000579611 PLB1Q6P1J6 1458 aa28.36■■■□□ 2.13
CDC42EP4-204ENST00000579611 ASXL2Q76L83 1435 aa28.35■■■□□ 2.13
CDC42EP4-204ENST00000579611 FAM9AQ8IZU1 332 aaPredicted RBP28.29■■■□□ 2.12
CDC42EP4-204ENST00000579611 ABCA8O94911 1581 aa28.25■■■□□ 2.11
CDC42EP4-204ENST00000579611 GLI2P10070 1586 aa28.24■■■□□ 2.11
CDC42EP4-204ENST00000579611 KIF21BO75037 1637 aa28.21■■■□□ 2.11
CDC42EP4-204ENST00000579611 SAMD9Q5K651 1589 aa28.2■■■□□ 2.11
CDC42EP4-204ENST00000579611 ZCCHC11Q5TAX3 1644 aaKnown RBP28.19■■■□□ 2.1
CDC42EP4-204ENST00000579611 EPRSP07814 1512 aaKnown RBP28.18■■■□□ 2.1
CDC42EP4-204ENST00000579611 P3H3Q8IVL6 736 aa28.17■■■□□ 2.1
CDC42EP4-204ENST00000579611 WDR7Q9Y4E6 1490 aa28.14■■■□□ 2.09
CDC42EP4-204ENST00000579611 ATP10BO94823 1461 aa28.05■■■□□ 2.08
CDC42EP4-204ENST00000579611 EFCAB5A4FU69 1503 aa28.03■■■□□ 2.08
CDC42EP4-204ENST00000579611 MAP3K4Q9Y6R4 1608 aa28.02■■■□□ 2.08
CDC42EP4-204ENST00000579611 TSPOAP1O95153 1857 aa28.02■■■□□ 2.08
CDC42EP4-204ENST00000579611 FHOD3Q2V2M9 1422 aa28.01■■■□□ 2.08
CDC42EP4-204ENST00000579611 KDM6BO15054 1643 aa28.01■■■□□ 2.07
CDC42EP4-204ENST00000579611 PPRC1Q5VV67 1664 aaKnown RBP28■■■□□ 2.07
CDC42EP4-204ENST00000579611 UBTFP17480 764 aaKnown RBP28■■■□□ 2.07
CDC42EP4-204ENST00000579611 RANGAP1P46060 587 aaPredicted RBP28■■■□□ 2.07
CDC42EP4-204ENST00000579611 TEX14Q8IWB6 1497 aa27.98■■■□□ 2.07
CDC42EP4-204ENST00000579611 RAPGEF6Q8TEU7 1601 aa27.96■■■□□ 2.07
CDC42EP4-204ENST00000579611 KCNH8Q96L42 1107 aa27.96■■■□□ 2.07
CDC42EP4-204ENST00000579611 NUP153P49790 1475 aaKnown RBP27.95■■■□□ 2.06
CDC42EP4-204ENST00000579611 CD109Q6YHK3 1445 aa27.93■■■□□ 2.06
CDC42EP4-204ENST00000579611 MAGI3Q5TCQ9 1506 aa27.93■■■□□ 2.06
CDC42EP4-204ENST00000579611 ARID3CA6NKF2 412 aa27.92■■■□□ 2.06
CDC42EP4-204ENST00000579611 COL17A1Q9UMD9 1497 aaPredicted RBP27.89■■■□□ 2.06
CDC42EP4-204ENST00000579611 CFAP43Q8NDM7 1665 aa27.87■■■□□ 2.05
CDC42EP4-204ENST00000579611 EHMT2Q96KQ7 1210 aa27.86■■■□□ 2.05
CDC42EP4-204ENST00000579611 ARHGAP35Q9NRY4 1499 aa27.83■■■□□ 2.05
CDC42EP4-204ENST00000579611 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.83■■■□□ 2.05
CDC42EP4-204ENST00000579611 HNRNPUL2Q1KMD3 747 aaKnown RBP27.83■■■□□ 2.05
CDC42EP4-204ENST00000579611 AEBP2Q6ZN18 517 aaPredicted RBP27.82■■■□□ 2.04
CDC42EP4-204ENST00000579611 FMN1Q68DA7 1419 aa27.81■■■□□ 2.04
CDC42EP4-204ENST00000579611 PLEKHD1A6NEE1 506 aa27.79■■■□□ 2.04
CDC42EP4-204ENST00000579611 ABCA9Q8IUA7 1624 aa27.77■■■□□ 2.04
CDC42EP4-204ENST00000579611 PHLDB1Q86UU1 1377 aa27.75■■■□□ 2.03
CDC42EP4-204ENST00000579611 ARAP3Q8WWN8 1544 aa27.7■■■□□ 2.02
CDC42EP4-204ENST00000579611 NEO1Q92859 1461 aa27.66■■■□□ 2.02
CDC42EP4-204ENST00000579611 KDM4FA0A1W2PPD8 638 aa27.66■■■□□ 2.02
CDC42EP4-204ENST00000579611 CDK13Q14004 1512 aaKnown RBP27.63■■■□□ 2.01
CDC42EP4-204ENST00000579611 HECW1Q76N89 1606 aa27.62■■■□□ 2.01
CDC42EP4-204ENST00000579611 CDK11AQ9UQ88 783 aaPredicted RBP27.61■■■□□ 2.01
CDC42EP4-204ENST00000579611 ATP1B4Q9UN42 357 aaPredicted RBP27.58■■■□□ 2.01
CDC42EP4-204ENST00000579611 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.57■■■□□ 2
CDC42EP4-204ENST00000579611 CASKIN1Q8WXD9 1431 aa27.56■■■□□ 2
CDC42EP4-204ENST00000579611 CLIP1P30622 1438 aa27.54■■■□□ 2
CDC42EP4-204ENST00000579611 RAPGEF3O95398 923 aa27.5■■□□□ 1.99
CDC42EP4-204ENST00000579611 FANCAO15360 1455 aa27.49■■□□□ 1.99
CDC42EP4-204ENST00000579611 PLCH2O75038 1416 aa27.49■■□□□ 1.99
CDC42EP4-204ENST00000579611 TROQ12816 1431 aaPredicted RBP27.49■■□□□ 1.99
CDC42EP4-204ENST00000579611 AKNAQ7Z591 1439 aa27.49■■□□□ 1.99
CDC42EP4-204ENST00000579611 TTC37Q6PGP7 1564 aa27.48■■□□□ 1.99
CDC42EP4-204ENST00000579611 ADGRL1O94910 1474 aa27.48■■□□□ 1.99
CDC42EP4-204ENST00000579611 CCDC18Q5T9S5 1454 aa27.45■■□□□ 1.99
CDC42EP4-204ENST00000579611 DENND4BO75064 1496 aaPredicted RBP27.43■■□□□ 1.98
CDC42EP4-204ENST00000579611 FYCO1Q9BQS8 1478 aa27.43■■□□□ 1.98
CDC42EP4-204ENST00000579611 PCF11O94913 1555 aaKnown RBP27.42■■□□□ 1.98
CDC42EP4-204ENST00000579611 CFAP74Q9C0B2 1584 aa27.42■■□□□ 1.98
CDC42EP4-204ENST00000579611 FRMPD1Q5SYB0 1578 aa27.39■■□□□ 1.98
CDC42EP4-204ENST00000579611 EFCAB2Q5VUJ9 269 aa27.38■■□□□ 1.97
CDC42EP4-204ENST00000579611 LRRIQ1Q96JM4 1722 aa27.36■■□□□ 1.97
CDC42EP4-204ENST00000579611 KIF14Q15058 1648 aa27.36■■□□□ 1.97
CDC42EP4-204ENST00000579611 SCAPERQ9BY12 1400 aa27.32■■□□□ 1.96
CDC42EP4-204ENST00000579611 CEP162Q5TB80 1403 aa27.31■■□□□ 1.96
CDC42EP4-204ENST00000579611 MAGI2Q86UL8 1455 aa27.3■■□□□ 1.96
CDC42EP4-204ENST00000579611 RICTORQ6R327 1708 aa27.3■■□□□ 1.96
CDC42EP4-204ENST00000579611 ZMYM4Q5VZL5 1548 aa27.29■■□□□ 1.96
CDC42EP4-204ENST00000579611 POGZQ7Z3K3 1410 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms