RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 WRNQ14191 1432 aaPredicted RBP eCLIP24.14■■□□□ 1.45
CDK5RAP3-213ENST00000579605 KDM6BO15054 1643 aa24.06■■□□□ 1.44
CDK5RAP3-213ENST00000579605 DIP2BQ9P265 1576 aa24.03■■□□□ 1.44
CDK5RAP3-213ENST00000579605 MAPKBP1O60336 1514 aa24.01■■□□□ 1.43
CDK5RAP3-213ENST00000579605 ERICH3Q5RHP9 1530 aa23.97■■□□□ 1.43
CDK5RAP3-213ENST00000579605 TSPOAP1O95153 1857 aa23.94■■□□□ 1.42
CDK5RAP3-213ENST00000579605 TTBK1Q5TCY1 1321 aaPredicted RBP23.93■■□□□ 1.42
CDK5RAP3-213ENST00000579605 ADCY10Q96PN6 1610 aa23.93■■□□□ 1.42
CDK5RAP3-213ENST00000579605 TOP2BQ02880 1626 aa23.86■■□□□ 1.41
CDK5RAP3-213ENST00000579605 ADGRL1O94910 1474 aa23.86■■□□□ 1.41
CDK5RAP3-213ENST00000579605 RUSC2Q8N2Y8 1516 aa23.85■■□□□ 1.41
CDK5RAP3-213ENST00000579605 SUPT5HO00267 1087 aaKnown RBP23.83■■□□□ 1.41
CDK5RAP3-213ENST00000579605 BIVM-ERCC5R4GMW8 1640 aa23.82■■□□□ 1.4
CDK5RAP3-213ENST00000579605 PTPRGP23470 1445 aa23.76■■□□□ 1.39
CDK5RAP3-213ENST00000579605 HECW2Q9P2P5 1572 aa23.74■■□□□ 1.39
CDK5RAP3-213ENST00000579605 KIAA0586Q9BVV6 1533 aa23.73■■□□□ 1.39
CDK5RAP3-213ENST00000579605 ASXL2Q76L83 1435 aa23.69■■□□□ 1.38
CDK5RAP3-213ENST00000579605 COL17A1Q9UMD9 1497 aaPredicted RBP23.67■■□□□ 1.38
CDK5RAP3-213ENST00000579605 PLB1Q6P1J6 1458 aa23.65■■□□□ 1.38
CDK5RAP3-213ENST00000579605 ABCC2Q92887 1545 aa23.64■■□□□ 1.37
CDK5RAP3-213ENST00000579605 IGF1RP08069 1367 aa23.62■■□□□ 1.37
CDK5RAP3-213ENST00000579605 PPRC1Q5VV67 1664 aaKnown RBP23.61■■□□□ 1.37
CDK5RAP3-213ENST00000579605 TNIKQ9UKE5 1360 aa23.61■■□□□ 1.37
CDK5RAP3-213ENST00000579605 FBXO41Q8TF61 875 aa23.59■■□□□ 1.37
CDK5RAP3-213ENST00000579605 GLI2P10070 1586 aa23.59■■□□□ 1.37
CDK5RAP3-213ENST00000579605 CARMIL2Q6F5E8 1435 aa23.57■■□□□ 1.36
CDK5RAP3-213ENST00000579605 EPRSP07814 1512 aaKnown RBP23.51■■□□□ 1.35
CDK5RAP3-213ENST00000579605 UACAQ9BZF9 1416 aa23.5■■□□□ 1.35
CDK5RAP3-213ENST00000579605 TEX14Q8IWB6 1497 aa23.49■■□□□ 1.35
CDK5RAP3-213ENST00000579605 KIF27Q86VH2 1401 aa23.49■■□□□ 1.35
CDK5RAP3-213ENST00000579605 CUL7Q14999 1698 aa23.48■■□□□ 1.35
CDK5RAP3-213ENST00000579605 UHRF1BP1LA0JNW5 1464 aa23.47■■□□□ 1.35
CDK5RAP3-213ENST00000579605 CARMIL1Q5VZK9 1371 aa23.45■■□□□ 1.34
CDK5RAP3-213ENST00000579605 MAP3K4Q9Y6R4 1608 aa23.42■■□□□ 1.34
CDK5RAP3-213ENST00000579605 KDM5BQ9UGL1 1544 aa23.38■■□□□ 1.33
CDK5RAP3-213ENST00000579605 KCNH8Q96L42 1107 aa23.37■■□□□ 1.33
CDK5RAP3-213ENST00000579605 IQGAP2Q13576 1575 aa23.35■■□□□ 1.33
CDK5RAP3-213ENST00000579605 DISP1Q96F81 1524 aa23.34■■□□□ 1.33
CDK5RAP3-213ENST00000579605 ZCCHC11Q5TAX3 1644 aaKnown RBP23.31■■□□□ 1.32
CDK5RAP3-213ENST00000579605 CD109Q6YHK3 1445 aa23.31■■□□□ 1.32
CDK5RAP3-213ENST00000579605 WDR7Q9Y4E6 1490 aa23.29■■□□□ 1.32
CDK5RAP3-213ENST00000579605 MAGI3Q5TCQ9 1506 aa23.22■■□□□ 1.31
CDK5RAP3-213ENST00000579605 KIF21BO75037 1637 aa23.22■■□□□ 1.31
CDK5RAP3-213ENST00000579605 LMTK3Q96Q04 1460 aa23.19■■□□□ 1.3
CDK5RAP3-213ENST00000579605 PTPRMP28827 1452 aa23.17■■□□□ 1.3
CDK5RAP3-213ENST00000579605 UGGT2Q9NYU1 1516 aa23.17■■□□□ 1.3
CDK5RAP3-213ENST00000579605 KIAA0556O60303 1618 aa23.14■■□□□ 1.29
CDK5RAP3-213ENST00000579605 ARID4BQ4LE39 1312 aaPredicted RBP23.13■■□□□ 1.29
CDK5RAP3-213ENST00000579605 ARID3CA6NKF2 412 aa23.12■■□□□ 1.29
CDK5RAP3-213ENST00000579605 CFAP43Q8NDM7 1665 aa23.1■■□□□ 1.29
CDK5RAP3-213ENST00000579605 RAPGEF3O95398 923 aa23.09■■□□□ 1.29
CDK5RAP3-213ENST00000579605 PLPPR3Q6T4P5 718 aa23.09■■□□□ 1.29
CDK5RAP3-213ENST00000579605 RAPGEF2Q9Y4G8 1499 aa23.09■■□□□ 1.29
CDK5RAP3-213ENST00000579605 HSPA2P54652 639 aa23.06■■□□□ 1.28
CDK5RAP3-213ENST00000579605 ARAP3Q8WWN8 1544 aa23.05■■□□□ 1.28
CDK5RAP3-213ENST00000579605 ADAMTSL3P82987 1691 aa23.03■■□□□ 1.28
CDK5RAP3-213ENST00000579605 PCF11O94913 1555 aaKnown RBP23.03■■□□□ 1.28
CDK5RAP3-213ENST00000579605 ILDR2Q71H61 639 aa23.02■■□□□ 1.28
CDK5RAP3-213ENST00000579605 CERKQ8TCT0 537 aa23.01■■□□□ 1.27
CDK5RAP3-213ENST00000579605 DISP3Q9P2K9 1392 aa22.99■■□□□ 1.27
CDK5RAP3-213ENST00000579605 ABCA8O94911 1581 aa22.98■■□□□ 1.27
CDK5RAP3-213ENST00000579605 SOCS7O14512 581 aa22.96■■□□□ 1.27
CDK5RAP3-213ENST00000579605 GOLGA3Q08378 1498 aa22.95■■□□□ 1.26
CDK5RAP3-213ENST00000579605 P3H3Q8IVL6 736 aa22.95■■□□□ 1.26
CDK5RAP3-213ENST00000579605 MADDQ8WXG6 1647 aa22.94■■□□□ 1.26
CDK5RAP3-213ENST00000579605 PHLDB1Q86UU1 1377 aa22.94■■□□□ 1.26
CDK5RAP3-213ENST00000579605 FAM9AQ8IZU1 332 aaPredicted RBP22.93■■□□□ 1.26
CDK5RAP3-213ENST00000579605 BCORL1Q5H9F3 1711 aa22.91■■□□□ 1.26
CDK5RAP3-213ENST00000579605 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.89■■□□□ 1.25
CDK5RAP3-213ENST00000579605 HNRNPUL2Q1KMD3 747 aaKnown RBP22.89■■□□□ 1.25
CDK5RAP3-213ENST00000579605 ATP10BO94823 1461 aa22.89■■□□□ 1.25
CDK5RAP3-213ENST00000579605 RIMS1Q86UR5 1692 aaKnown RBP22.84■■□□□ 1.25
CDK5RAP3-213ENST00000579605 MLECQ14165 292 aa22.83■■□□□ 1.25
CDK5RAP3-213ENST00000579605 NEO1Q92859 1461 aa22.83■■□□□ 1.25
CDK5RAP3-213ENST00000579605 ABCA9Q8IUA7 1624 aa22.8■■□□□ 1.24
CDK5RAP3-213ENST00000579605 CTTNBP2Q8WZ74 1663 aa22.78■■□□□ 1.24
CDK5RAP3-213ENST00000579605 FRMPD1Q5SYB0 1578 aa22.78■■□□□ 1.24
CDK5RAP3-213ENST00000579605 POGZQ7Z3K3 1410 aa22.74■■□□□ 1.23
CDK5RAP3-213ENST00000579605 DENND4BO75064 1496 aaPredicted RBP22.73■■□□□ 1.23
CDK5RAP3-213ENST00000579605 AKNAQ7Z591 1439 aa22.7■■□□□ 1.22
CDK5RAP3-213ENST00000579605 ARHGEF40Q8TER5 1519 aa22.7■■□□□ 1.22
CDK5RAP3-213ENST00000579605 FANCAO15360 1455 aa22.68■■□□□ 1.22
CDK5RAP3-213ENST00000579605 CEBPAP49715 358 aaPredicted RBP22.67■■□□□ 1.22
CDK5RAP3-213ENST00000579605 YEATS2Q9ULM3 1422 aa22.66■■□□□ 1.22
CDK5RAP3-213ENST00000579605 PLEKHD1A6NEE1 506 aa22.65■■□□□ 1.22
CDK5RAP3-213ENST00000579605 RANGAP1P46060 587 aaPredicted RBP22.65■■□□□ 1.22
CDK5RAP3-213ENST00000579605 FHOD3Q2V2M9 1422 aa22.65■■□□□ 1.22
CDK5RAP3-213ENST00000579605 DMRT2Q9Y5R5 561 aa22.64■■□□□ 1.21
CDK5RAP3-213ENST00000579605 PRXQ9BXM0 1461 aa22.62■■□□□ 1.21
CDK5RAP3-213ENST00000579605 ZFYVE16Q7Z3T8 1539 aa22.59■■□□□ 1.21
CDK5RAP3-213ENST00000579605 RAPGEF6Q8TEU7 1601 aa22.59■■□□□ 1.21
CDK5RAP3-213ENST00000579605 RICTORQ6R327 1708 aa22.59■■□□□ 1.21
CDK5RAP3-213ENST00000579605 SPATA31D1Q6ZQQ2 1576 aa22.59■■□□□ 1.21
CDK5RAP3-213ENST00000579605 SIGLEC1Q9BZZ2 1709 aa22.57■■□□□ 1.2
CDK5RAP3-213ENST00000579605 NUP153P49790 1475 aaKnown RBP22.55■■□□□ 1.2
CDK5RAP3-213ENST00000579605 EFCAB5A4FU69 1503 aa22.54■■□□□ 1.2
CDK5RAP3-213ENST00000579605 FER1L4A9Z1Z3 1794 aa22.52■■□□□ 1.2
CDK5RAP3-213ENST00000579605 ZMYM4Q5VZL5 1548 aa22.52■■□□□ 1.19
CDK5RAP3-213ENST00000579605 TTC37Q6PGP7 1564 aa22.51■■□□□ 1.19
CDK5RAP3-213ENST00000579605 MAGI2Q86UL8 1455 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 569.6 ms