RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 IGF1RP08069 1367 aa33.8■■■■□ 3
CDKN2A-213ENST00000579122 KIF27Q86VH2 1401 aa33.79■■■■□ 3
CDKN2A-213ENST00000579122 KIF13AQ9H1H9 1805 aa33.78■■■■□ 3
CDKN2A-213ENST00000579122 KIAA0586Q9BVV6 1533 aa33.75■■■□□ 2.99
CDKN2A-213ENST00000579122 CUL7Q14999 1698 aa33.74■■■□□ 2.99
CDKN2A-213ENST00000579122 NPM1P06748 294 aaKnown RBP eCLIP33.7■■■□□ 2.99
CDKN2A-213ENST00000579122 MAPKBP1O60336 1514 aa33.67■■■□□ 2.98
CDKN2A-213ENST00000579122 ABCC10Q5T3U5 1492 aa33.66■■■□□ 2.98
CDKN2A-213ENST00000579122 ADCY10Q96PN6 1610 aa33.64■■■□□ 2.98
CDKN2A-213ENST00000579122 FAM69CQ0P6D2 419 aa33.62■■■□□ 2.97
CDKN2A-213ENST00000579122 CARMIL1Q5VZK9 1371 aa33.56■■■□□ 2.96
CDKN2A-213ENST00000579122 DIP2BQ9P265 1576 aa33.55■■■□□ 2.96
CDKN2A-213ENST00000579122 PTPRGP23470 1445 aa33.47■■■□□ 2.95
CDKN2A-213ENST00000579122 CARMIL2Q6F5E8 1435 aa33.43■■■□□ 2.94
CDKN2A-213ENST00000579122 TNIKQ9UKE5 1360 aa33.41■■■□□ 2.94
CDKN2A-213ENST00000579122 IQGAP2Q13576 1575 aa33.38■■■□□ 2.93
CDKN2A-213ENST00000579122 ABCC2Q92887 1545 aa33.33■■■□□ 2.93
CDKN2A-213ENST00000579122 TTBK1Q5TCY1 1321 aaPredicted RBP33.32■■■□□ 2.93
CDKN2A-213ENST00000579122 KDM6BO15054 1643 aa33.3■■■□□ 2.92
CDKN2A-213ENST00000579122 UHRF1BP1LA0JNW5 1464 aa33.26■■■□□ 2.92
CDKN2A-213ENST00000579122 TSPOAP1O95153 1857 aa33.26■■■□□ 2.91
CDKN2A-213ENST00000579122 DISP1Q96F81 1524 aa33.25■■■□□ 2.91
CDKN2A-213ENST00000579122 RAPGEF2Q9Y4G8 1499 aa33.24■■■□□ 2.91
CDKN2A-213ENST00000579122 PLB1Q6P1J6 1458 aa33.23■■■□□ 2.91
CDKN2A-213ENST00000579122 ASXL2Q76L83 1435 aa33.21■■■□□ 2.91
CDKN2A-213ENST00000579122 UACAQ9BZF9 1416 aa33.21■■■□□ 2.91
CDKN2A-213ENST00000579122 UGGT2Q9NYU1 1516 aa33.18■■■□□ 2.9
CDKN2A-213ENST00000579122 GLI2P10070 1586 aa33.17■■■□□ 2.9
CDKN2A-213ENST00000579122 KDM5BQ9UGL1 1544 aa33.1■■■□□ 2.89
CDKN2A-213ENST00000579122 KIAA0556O60303 1618 aa33.08■■■□□ 2.89
CDKN2A-213ENST00000579122 PPRC1Q5VV67 1664 aaKnown RBP33.07■■■□□ 2.88
CDKN2A-213ENST00000579122 KDM4FA0A1W2PPD8 638 aa33.06■■■□□ 2.88
CDKN2A-213ENST00000579122 EPRSP07814 1512 aaKnown RBP33.02■■■□□ 2.88
CDKN2A-213ENST00000579122 ZCCHC11Q5TAX3 1644 aaKnown RBP32.99■■■□□ 2.87
CDKN2A-213ENST00000579122 MAP3K4Q9Y6R4 1608 aa32.95■■■□□ 2.87
CDKN2A-213ENST00000579122 CTTNBP2Q8WZ74 1663 aa32.95■■■□□ 2.87
CDKN2A-213ENST00000579122 GOLGA3Q08378 1498 aa32.91■■■□□ 2.86
CDKN2A-213ENST00000579122 TEX14Q8IWB6 1497 aa32.9■■■□□ 2.86
CDKN2A-213ENST00000579122 WDR7Q9Y4E6 1490 aa32.87■■■□□ 2.85
CDKN2A-213ENST00000579122 COL17A1Q9UMD9 1497 aaPredicted RBP32.86■■■□□ 2.85
CDKN2A-213ENST00000579122 PRXQ9BXM0 1461 aa32.86■■■□□ 2.85
CDKN2A-213ENST00000579122 ABCA8O94911 1581 aa32.8■■■□□ 2.84
CDKN2A-213ENST00000579122 ADGRL1O94910 1474 aa32.75■■■□□ 2.83
CDKN2A-213ENST00000579122 MAGI3Q5TCQ9 1506 aa32.69■■■□□ 2.82
CDKN2A-213ENST00000579122 CFAP43Q8NDM7 1665 aa32.69■■■□□ 2.82
CDKN2A-213ENST00000579122 CD109Q6YHK3 1445 aa32.68■■■□□ 2.82
CDKN2A-213ENST00000579122 KCNH8Q96L42 1107 aa32.66■■■□□ 2.82
CDKN2A-213ENST00000579122 FAM9AQ8IZU1 332 aaPredicted RBP32.62■■■□□ 2.81
CDKN2A-213ENST00000579122 CSRNP3Q8WYN3 585 aa32.55■■■□□ 2.8
CDKN2A-213ENST00000579122 P3H3Q8IVL6 736 aa32.54■■■□□ 2.8
CDKN2A-213ENST00000579122 ATP10BO94823 1461 aa32.53■■■□□ 2.8
CDKN2A-213ENST00000579122 SAMD9Q5K651 1589 aa32.5■■■□□ 2.79
CDKN2A-213ENST00000579122 ARID3CA6NKF2 412 aa32.47■■■□□ 2.79
CDKN2A-213ENST00000579122 ARAP3Q8WWN8 1544 aa32.44■■■□□ 2.78
CDKN2A-213ENST00000579122 ABCA9Q8IUA7 1624 aa32.4■■■□□ 2.78
CDKN2A-213ENST00000579122 EEA1Q15075 1411 aa32.4■■■□□ 2.78
CDKN2A-213ENST00000579122 RAPGEF6Q8TEU7 1601 aa32.4■■■□□ 2.78
CDKN2A-213ENST00000579122 PHLDB1Q86UU1 1377 aa32.38■■■□□ 2.77
CDKN2A-213ENST00000579122 HECW2Q9P2P5 1572 aa32.35■■■□□ 2.77
CDKN2A-213ENST00000579122 KIF21BO75037 1637 aa32.32■■■□□ 2.76
CDKN2A-213ENST00000579122 NUP153P49790 1475 aaKnown RBP32.29■■■□□ 2.76
CDKN2A-213ENST00000579122 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.29■■■□□ 2.76
CDKN2A-213ENST00000579122 HNRNPUL2Q1KMD3 747 aaKnown RBP32.29■■■□□ 2.76
CDKN2A-213ENST00000579122 NEO1Q92859 1461 aa32.29■■■□□ 2.76
CDKN2A-213ENST00000579122 FHOD3Q2V2M9 1422 aa32.26■■■□□ 2.75
CDKN2A-213ENST00000579122 RANGAP1P46060 587 aaPredicted RBP32.23■■■□□ 2.75
CDKN2A-213ENST00000579122 ILDR1Q86SU0 546 aaPredicted RBP32.23■■■□□ 2.75
CDKN2A-213ENST00000579122 RAPGEF3O95398 923 aa32.2■■■□□ 2.75
CDKN2A-213ENST00000579122 PLEKHD1A6NEE1 506 aa32.15■■■□□ 2.74
CDKN2A-213ENST00000579122 EFCAB5A4FU69 1503 aa32.15■■■□□ 2.74
CDKN2A-213ENST00000579122 FRMPD1Q5SYB0 1578 aa32.13■■■□□ 2.73
CDKN2A-213ENST00000579122 ADAMTSL3P82987 1691 aa32.1■■■□□ 2.73
CDKN2A-213ENST00000579122 PTPRMP28827 1452 aa32.06■■■□□ 2.72
CDKN2A-213ENST00000579122 DENND4BO75064 1496 aaPredicted RBP32.03■■■□□ 2.72
CDKN2A-213ENST00000579122 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.03■■■□□ 2.72
CDKN2A-213ENST00000579122 AKNAQ7Z591 1439 aa32.02■■■□□ 2.72
CDKN2A-213ENST00000579122 CFAP74Q9C0B2 1584 aa32.02■■■□□ 2.72
CDKN2A-213ENST00000579122 BCORL1Q5H9F3 1711 aa32.01■■■□□ 2.72
CDKN2A-213ENST00000579122 FANCAO15360 1455 aa32.01■■■□□ 2.71
CDKN2A-213ENST00000579122 ARID4BQ4LE39 1312 aaPredicted RBP32■■■□□ 2.71
CDKN2A-213ENST00000579122 RICTORQ6R327 1708 aa31.99■■■□□ 2.71
CDKN2A-213ENST00000579122 ARHGEF40Q8TER5 1519 aa31.99■■■□□ 2.71
CDKN2A-213ENST00000579122 TTC37Q6PGP7 1564 aa31.97■■■□□ 2.71
CDKN2A-213ENST00000579122 CDK13Q14004 1512 aaKnown RBP31.94■■■□□ 2.7
CDKN2A-213ENST00000579122 MADDQ8WXG6 1647 aa31.93■■■□□ 2.7
CDKN2A-213ENST00000579122 ZMYM4Q5VZL5 1548 aa31.9■■■□□ 2.7
CDKN2A-213ENST00000579122 UBTFP17480 764 aaKnown RBP31.88■■■□□ 2.69
CDKN2A-213ENST00000579122 FMN1Q68DA7 1419 aa31.87■■■□□ 2.69
CDKN2A-213ENST00000579122 MAGI2Q86UL8 1455 aa31.84■■■□□ 2.69
CDKN2A-213ENST00000579122 PLCH2O75038 1416 aa31.84■■■□□ 2.69
CDKN2A-213ENST00000579122 HECW1Q76N89 1606 aa31.83■■■□□ 2.69
CDKN2A-213ENST00000579122 ZFYVE16Q7Z3T8 1539 aa31.83■■■□□ 2.69
CDKN2A-213ENST00000579122 ARHGAP35Q9NRY4 1499 aa31.82■■■□□ 2.68
CDKN2A-213ENST00000579122 POGZQ7Z3K3 1410 aa31.82■■■□□ 2.68
CDKN2A-213ENST00000579122 PCF11O94913 1555 aaKnown RBP31.81■■■□□ 2.68
CDKN2A-213ENST00000579122 EHMT2Q96KQ7 1210 aa31.8■■■□□ 2.68
CDKN2A-213ENST00000579122 YEATS2Q9ULM3 1422 aa31.8■■■□□ 2.68
CDKN2A-213ENST00000579122 RIMS1Q86UR5 1692 aaKnown RBP31.8■■■□□ 2.68
CDKN2A-213ENST00000579122 SCAPERQ9BY12 1400 aa31.79■■■□□ 2.68
CDKN2A-213ENST00000579122 ATP1B4Q9UN42 357 aaPredicted RBP31.79■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms