RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 GRIN2AQ12879 1464 aa18.54■□□□□ 0.56
CDK5RAP3-210ENST00000578733 RAPGEF2Q9Y4G8 1499 aa18.54■□□□□ 0.56
CDK5RAP3-210ENST00000578733 PRXQ9BXM0 1461 aa18.52■□□□□ 0.55
CDK5RAP3-210ENST00000578733 CTTNBP2Q8WZ74 1663 aa18.5■□□□□ 0.55
CDK5RAP3-210ENST00000578733 AEBP2Q6ZN18 517 aaPredicted RBP18.49■□□□□ 0.55
CDK5RAP3-210ENST00000578733 CLASP1Q7Z460 1538 aa18.46■□□□□ 0.55
CDK5RAP3-210ENST00000578733 GOLGA3Q08378 1498 aa18.44■□□□□ 0.54
CDK5RAP3-210ENST00000578733 CEP170Q5SW79 1584 aa18.43■□□□□ 0.54
CDK5RAP3-210ENST00000578733 NUP160Q12769 1436 aa18.41■□□□□ 0.54
CDK5RAP3-210ENST00000578733 IQGAP2Q13576 1575 aa18.36■□□□□ 0.53
CDK5RAP3-210ENST00000578733 KIAA0586Q9BVV6 1533 aa18.35■□□□□ 0.53
CDK5RAP3-210ENST00000578733 UBTFP17480 764 aaKnown RBP18.32■□□□□ 0.52
CDK5RAP3-210ENST00000578733 SHROOM2Q13796 1616 aa18.31■□□□□ 0.52
CDK5RAP3-210ENST00000578733 EHMT2Q96KQ7 1210 aa18.28■□□□□ 0.52
CDK5RAP3-210ENST00000578733 UGGT2Q9NYU1 1516 aa18.23■□□□□ 0.51
CDK5RAP3-210ENST00000578733 TNIKQ9UKE5 1360 aa18.22■□□□□ 0.51
CDK5RAP3-210ENST00000578733 JPH4Q96JJ6 628 aa18.21■□□□□ 0.51
CDK5RAP3-210ENST00000578733 CARMIL2Q6F5E8 1435 aa18.2■□□□□ 0.5
CDK5RAP3-210ENST00000578733 EFCAB5A4FU69 1503 aa18.19■□□□□ 0.5
CDK5RAP3-210ENST00000578733 PRG4Q92954 1404 aaPredicted RBP18.17■□□□□ 0.5
CDK5RAP3-210ENST00000578733 KIAA0556O60303 1618 aa18.17■□□□□ 0.5
CDK5RAP3-210ENST00000578733 SAMD9Q5K651 1589 aa18.17■□□□□ 0.5
CDK5RAP3-210ENST00000578733 LOC105371045A0A1W2PR82 267 aa18.14■□□□□ 0.49
CDK5RAP3-210ENST00000578733 RANGAP1P46060 587 aaPredicted RBP18.11■□□□□ 0.49
CDK5RAP3-210ENST00000578733 DISP1Q96F81 1524 aa18.11■□□□□ 0.49
CDK5RAP3-210ENST00000578733 ERCC6L2Q5T890 1561 aa18.09■□□□□ 0.49
CDK5RAP3-210ENST00000578733 CLIP1P30622 1438 aa18.08■□□□□ 0.49
CDK5RAP3-210ENST00000578733 CEP162Q5TB80 1403 aa18.07■□□□□ 0.48
CDK5RAP3-210ENST00000578733 ARHGAP35Q9NRY4 1499 aa18.04■□□□□ 0.48
CDK5RAP3-210ENST00000578733 PTPRGP23470 1445 aa18.01■□□□□ 0.47
CDK5RAP3-210ENST00000578733 KIF13AQ9H1H9 1805 aa18■□□□□ 0.47
CDK5RAP3-210ENST00000578733 FHOD3Q2V2M9 1422 aa18■□□□□ 0.47
CDK5RAP3-210ENST00000578733 P3H3Q8IVL6 736 aa18■□□□□ 0.47
CDK5RAP3-210ENST00000578733 FMN1Q68DA7 1419 aa17.98■□□□□ 0.47
CDK5RAP3-210ENST00000578733 TTBK1Q5TCY1 1321 aaPredicted RBP17.97■□□□□ 0.47
CDK5RAP3-210ENST00000578733 RAPGEF6Q8TEU7 1601 aa17.95■□□□□ 0.46
CDK5RAP3-210ENST00000578733 ABCA8O94911 1581 aa17.91■□□□□ 0.46
CDK5RAP3-210ENST00000578733 HECW1Q76N89 1606 aa17.91■□□□□ 0.46
CDK5RAP3-210ENST00000578733 UACAQ9BZF9 1416 aa17.91■□□□□ 0.46
CDK5RAP3-210ENST00000578733 ABCC2Q92887 1545 aa17.91■□□□□ 0.46
CDK5RAP3-210ENST00000578733 UHRF1BP1LA0JNW5 1464 aa17.88■□□□□ 0.45
CDK5RAP3-210ENST00000578733 ABCC10Q5T3U5 1492 aa17.88■□□□□ 0.45
CDK5RAP3-210ENST00000578733 ADCY10Q96PN6 1610 aa17.88■□□□□ 0.45
CDK5RAP3-210ENST00000578733 PLB1Q6P1J6 1458 aa17.87■□□□□ 0.45
CDK5RAP3-210ENST00000578733 PCF11O94913 1555 aaKnown RBP17.87■□□□□ 0.45
CDK5RAP3-210ENST00000578733 NPM1P06748 294 aaKnown RBP eCLIP17.86■□□□□ 0.45
CDK5RAP3-210ENST00000578733 FYCO1Q9BQS8 1478 aa17.86■□□□□ 0.45
CDK5RAP3-210ENST00000578733 MAPKBP1O60336 1514 aa17.86■□□□□ 0.45
CDK5RAP3-210ENST00000578733 FAM69CQ0P6D2 419 aa17.85■□□□□ 0.45
CDK5RAP3-210ENST00000578733 VPS8Q8N3P4 1428 aa17.85■□□□□ 0.45
CDK5RAP3-210ENST00000578733 CASKIN1Q8WXD9 1431 aa17.84■□□□□ 0.45
CDK5RAP3-210ENST00000578733 ZCCHC11Q5TAX3 1644 aaKnown RBP17.83■□□□□ 0.44
CDK5RAP3-210ENST00000578733 DIP2BQ9P265 1576 aa17.81■□□□□ 0.44
CDK5RAP3-210ENST00000578733 CCDC18Q5T9S5 1454 aa17.81■□□□□ 0.44
CDK5RAP3-210ENST00000578733 LRRIQ1Q96JM4 1722 aa17.81■□□□□ 0.44
CDK5RAP3-210ENST00000578733 ATP1B4Q9UN42 357 aaPredicted RBP17.8■□□□□ 0.44
CDK5RAP3-210ENST00000578733 KDM5BQ9UGL1 1544 aa17.79■□□□□ 0.44
CDK5RAP3-210ENST00000578733 KDM6BO15054 1643 aa17.79■□□□□ 0.44
CDK5RAP3-210ENST00000578733 NUP153P49790 1475 aaKnown RBP17.78■□□□□ 0.44
CDK5RAP3-210ENST00000578733 CFAP43Q8NDM7 1665 aa17.76■□□□□ 0.43
CDK5RAP3-210ENST00000578733 EPRSP07814 1512 aaKnown RBP17.75■□□□□ 0.43
CDK5RAP3-210ENST00000578733 KDM4FA0A1W2PPD8 638 aa17.74■□□□□ 0.43
CDK5RAP3-210ENST00000578733 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.74■□□□□ 0.43
CDK5RAP3-210ENST00000578733 HNRNPUL2Q1KMD3 747 aaKnown RBP17.74■□□□□ 0.43
CDK5RAP3-210ENST00000578733 APLP2Q06481 763 aa17.73■□□□□ 0.43
CDK5RAP3-210ENST00000578733 ATP10BO94823 1461 aa17.71■□□□□ 0.43
CDK5RAP3-210ENST00000578733 CDK11AQ9UQ88 783 aaPredicted RBP17.71■□□□□ 0.43
CDK5RAP3-210ENST00000578733 CDK13Q14004 1512 aaKnown RBP17.71■□□□□ 0.43
CDK5RAP3-210ENST00000578733 TIAM1Q13009 1591 aa17.69■□□□□ 0.42
CDK5RAP3-210ENST00000578733 MAP3K1Q13233 1512 aa17.68■□□□□ 0.42
CDK5RAP3-210ENST00000578733 ARID3CA6NKF2 412 aa17.68■□□□□ 0.42
CDK5RAP3-210ENST00000578733 TSPOAP1O95153 1857 aa17.67■□□□□ 0.42
CDK5RAP3-210ENST00000578733 ASXL2Q76L83 1435 aa17.65■□□□□ 0.42
CDK5RAP3-210ENST00000578733 WDR7Q9Y4E6 1490 aa17.65■□□□□ 0.42
CDK5RAP3-210ENST00000578733 PLEKHD1A6NEE1 506 aa17.65■□□□□ 0.42
CDK5RAP3-210ENST00000578733 ILDR1Q86SU0 546 aaPredicted RBP17.65■□□□□ 0.42
CDK5RAP3-210ENST00000578733 EHBP1L1Q8N3D4 1523 aa17.63■□□□□ 0.41
CDK5RAP3-210ENST00000578733 KIF14Q15058 1648 aa17.62■□□□□ 0.41
CDK5RAP3-210ENST00000578733 SUPT6HQ7KZ85 1726 aaKnown RBP17.61■□□□□ 0.41
CDK5RAP3-210ENST00000578733 MTUS2Q5JR59 1369 aa17.61■□□□□ 0.41
CDK5RAP3-210ENST00000578733 TROQ12816 1431 aaPredicted RBP17.6■□□□□ 0.41
CDK5RAP3-210ENST00000578733 GLI2P10070 1586 aa17.57■□□□□ 0.4
CDK5RAP3-210ENST00000578733 LRRC9Q6ZRR7 1453 aa17.56■□□□□ 0.4
CDK5RAP3-210ENST00000578733 MYO5CQ9NQX4 1742 aa17.55■□□□□ 0.4
CDK5RAP3-210ENST00000578733 MAGI3Q5TCQ9 1506 aa17.55■□□□□ 0.4
CDK5RAP3-210ENST00000578733 ABCA9Q8IUA7 1624 aa17.54■□□□□ 0.4
CDK5RAP3-210ENST00000578733 ITSN2Q9NZM3 1697 aa17.54■□□□□ 0.4
CDK5RAP3-210ENST00000578733 ADGRL1O94910 1474 aa17.53■□□□□ 0.4
CDK5RAP3-210ENST00000578733 KCNH8Q96L42 1107 aa17.53■□□□□ 0.4
CDK5RAP3-210ENST00000578733 PPRC1Q5VV67 1664 aaKnown RBP17.52■□□□□ 0.39
CDK5RAP3-210ENST00000578733 MAP3K4Q9Y6R4 1608 aa17.51■□□□□ 0.39
CDK5RAP3-210ENST00000578733 CDC42BPAQ5VT25 1732 aa17.5■□□□□ 0.39
CDK5RAP3-210ENST00000578733 TTC37Q6PGP7 1564 aa17.49■□□□□ 0.39
CDK5RAP3-210ENST00000578733 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.49■□□□□ 0.39
CDK5RAP3-210ENST00000578733 CFAP74Q9C0B2 1584 aa17.47■□□□□ 0.39
CDK5RAP3-210ENST00000578733 PREX2Q70Z35 1606 aa17.47■□□□□ 0.39
CDK5RAP3-210ENST00000578733 NCOA2Q15596 1464 aa17.46■□□□□ 0.39
CDK5RAP3-210ENST00000578733 TEX14Q8IWB6 1497 aa17.46■□□□□ 0.39
CDK5RAP3-210ENST00000578733 KANK4Q5T7N3 995 aaPredicted RBP17.45■□□□□ 0.38
CDK5RAP3-210ENST00000578733 CDC42BPBQ9Y5S2 1711 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms