RNA–Protein interactions for RNA: ENST00000578569.1

EIF4A1-210, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-210ENST00000578569 CHMP7Q8WUX9 453 aaPredicted RBP10.94□□□□□ -0.66
EIF4A1-210ENST00000578569 RUSC2Q8N2Y8 1516 aa10.94□□□□□ -0.66
EIF4A1-210ENST00000578569 CARMIL1Q5VZK9 1371 aa10.93□□□□□ -0.66
EIF4A1-210ENST00000578569 CUL7Q14999 1698 aa10.93□□□□□ -0.66
EIF4A1-210ENST00000578569 NPM3O75607 178 aaKnown RBP10.92□□□□□ -0.66
EIF4A1-210ENST00000578569 CSRNP3Q8WYN3 585 aa10.92□□□□□ -0.66
EIF4A1-210ENST00000578569 OSCARQ8IYS5 282 aa10.91□□□□□ -0.66
EIF4A1-210ENST00000578569 GRIN2AQ12879 1464 aa10.91□□□□□ -0.66
EIF4A1-210ENST00000578569 PRXQ9BXM0 1461 aa10.9□□□□□ -0.66
EIF4A1-210ENST00000578569 FBLN2P98095 1184 aa10.9□□□□□ -0.66
EIF4A1-210ENST00000578569 MAPK8IP2Q13387 824 aaPredicted RBP10.9□□□□□ -0.66
EIF4A1-210ENST00000578569 RAPGEF2Q9Y4G8 1499 aa10.89□□□□□ -0.67
EIF4A1-210ENST00000578569 NUP160Q12769 1436 aa10.88□□□□□ -0.67
EIF4A1-210ENST00000578569 PPARGC1BQ86YN6 1023 aaKnown RBP10.86□□□□□ -0.67
EIF4A1-210ENST00000578569 ZEB1P37275 1124 aaPredicted RBP10.85□□□□□ -0.67
EIF4A1-210ENST00000578569 SLC4A1APQ9BWU0 796 aaKnown RBP10.85□□□□□ -0.67
EIF4A1-210ENST00000578569 CHD1O14646 1710 aa10.84□□□□□ -0.67
EIF4A1-210ENST00000578569 FAM9AQ8IZU1 332 aaPredicted RBP10.83□□□□□ -0.68
EIF4A1-210ENST00000578569 PCGF6Q9BYE7 350 aa10.82□□□□□ -0.68
EIF4A1-210ENST00000578569 KIAA0586Q9BVV6 1533 aa10.82□□□□□ -0.68
EIF4A1-210ENST00000578569 KIF21BO75037 1637 aa10.81□□□□□ -0.68
EIF4A1-210ENST00000578569 CLASP1Q7Z460 1538 aa10.81□□□□□ -0.68
EIF4A1-210ENST00000578569 CEP170Q5SW79 1584 aa10.81□□□□□ -0.68
EIF4A1-210ENST00000578569 EHMT2Q96KQ7 1210 aa10.8□□□□□ -0.68
EIF4A1-210ENST00000578569 DNAJC5Q9H3Z4 198 aa10.8□□□□□ -0.68
EIF4A1-210ENST00000578569 GOLGA3Q08378 1498 aa10.78□□□□□ -0.68
EIF4A1-210ENST00000578569 JPH4Q96JJ6 628 aa10.75□□□□□ -0.69
EIF4A1-210ENST00000578569 IQGAP2Q13576 1575 aa10.73□□□□□ -0.69
EIF4A1-210ENST00000578569 SHROOM2Q13796 1616 aa10.73□□□□□ -0.69
EIF4A1-210ENST00000578569 ARHGEF11O15085 1522 aa10.71□□□□□ -0.69
EIF4A1-210ENST00000578569 UBTFP17480 764 aaKnown RBP10.71□□□□□ -0.69
EIF4A1-210ENST00000578569 UGGT2Q9NYU1 1516 aa10.71□□□□□ -0.69
EIF4A1-210ENST00000578569 DMRT2Q9Y5R5 561 aa10.71□□□□□ -0.69
EIF4A1-210ENST00000578569 CARMIL2Q6F5E8 1435 aa10.7□□□□□ -0.7
EIF4A1-210ENST00000578569 PRG4Q92954 1404 aaPredicted RBP10.7□□□□□ -0.7
EIF4A1-210ENST00000578569 RNF216Q9NWF9 866 aaPredicted RBP10.7□□□□□ -0.7
EIF4A1-210ENST00000578569 TNIKQ9UKE5 1360 aa10.69□□□□□ -0.7
EIF4A1-210ENST00000578569 CTTNBP2Q8WZ74 1663 aa10.68□□□□□ -0.7
EIF4A1-210ENST00000578569 ACIN1Q9UKV3 1341 aaKnown RBP10.65□□□□□ -0.7
EIF4A1-210ENST00000578569 DISP1Q96F81 1524 aa10.65□□□□□ -0.7
EIF4A1-210ENST00000578569 EFCAB5A4FU69 1503 aa10.64□□□□□ -0.71
EIF4A1-210ENST00000578569 RIMBP3CA6NJZ7 1639 aa10.64□□□□□ -0.71
EIF4A1-210ENST00000578569 RIMBP3BA6NNM3 1639 aa10.64□□□□□ -0.71
EIF4A1-210ENST00000578569 RIMBP3Q9UFD9 1639 aa10.64□□□□□ -0.71
EIF4A1-210ENST00000578569 ARAP1Q96P48 1450 aa10.63□□□□□ -0.71
EIF4A1-210ENST00000578569 KIAA0556O60303 1618 aa10.63□□□□□ -0.71
EIF4A1-210ENST00000578569 ERCC6L2Q5T890 1561 aa10.62□□□□□ -0.71
EIF4A1-210ENST00000578569 SAMD9Q5K651 1589 aa10.61□□□□□ -0.71
EIF4A1-210ENST00000578569 PTPRGP23470 1445 aa10.61□□□□□ -0.71
EIF4A1-210ENST00000578569 TRIM26Q12899 539 aaPredicted RBP10.61□□□□□ -0.71
EIF4A1-210ENST00000578569 CENPBP07199 599 aaPredicted RBP10.6□□□□□ -0.71
EIF4A1-210ENST00000578569 LOC105371045A0A1W2PR82 267 aa10.59□□□□□ -0.71
EIF4A1-210ENST00000578569 CLIP1P30622 1438 aa10.58□□□□□ -0.72
EIF4A1-210ENST00000578569 ARHGAP35Q9NRY4 1499 aa10.58□□□□□ -0.72
EIF4A1-210ENST00000578569 HOXD11P31277 338 aaPredicted RBP10.58□□□□□ -0.72
EIF4A1-210ENST00000578569 CYB5RLQ6IPT4 315 aa10.58□□□□□ -0.72
EIF4A1-210ENST00000578569 CEP162Q5TB80 1403 aa10.57□□□□□ -0.72
EIF4A1-210ENST00000578569 FHOD3Q2V2M9 1422 aa10.56□□□□□ -0.72
EIF4A1-210ENST00000578569 FMN1Q68DA7 1419 aa10.56□□□□□ -0.72
EIF4A1-210ENST00000578569 UACAQ9BZF9 1416 aa10.56□□□□□ -0.72
EIF4A1-210ENST00000578569 UHRF1BP1LA0JNW5 1464 aa10.55□□□□□ -0.72
EIF4A1-210ENST00000578569 RANGAP1P46060 587 aaPredicted RBP10.55□□□□□ -0.72
EIF4A1-210ENST00000578569 P3H3Q8IVL6 736 aa10.54□□□□□ -0.72
EIF4A1-210ENST00000578569 ABCC2Q92887 1545 aa10.52□□□□□ -0.73
EIF4A1-210ENST00000578569 PLB1Q6P1J6 1458 aa10.51□□□□□ -0.73
EIF4A1-210ENST00000578569 ABCA8O94911 1581 aa10.51□□□□□ -0.73
EIF4A1-210ENST00000578569 NPM1P06748 294 aaKnown RBP eCLIP10.5□□□□□ -0.73
EIF4A1-210ENST00000578569 KDM5BQ9UGL1 1544 aa10.48□□□□□ -0.73
EIF4A1-210ENST00000578569 ADCY10Q96PN6 1610 aa10.47□□□□□ -0.73
EIF4A1-210ENST00000578569 GTF3C3Q9Y5Q9 886 aa10.47□□□□□ -0.73
EIF4A1-210ENST00000578569 CASKIN1Q8WXD9 1431 aa10.47□□□□□ -0.73
EIF4A1-210ENST00000578569 RAPGEF6Q8TEU7 1601 aa10.47□□□□□ -0.73
EIF4A1-210ENST00000578569 VPS8Q8N3P4 1428 aa10.46□□□□□ -0.74
EIF4A1-210ENST00000578569 NUP153P49790 1475 aaKnown RBP10.45□□□□□ -0.74
EIF4A1-210ENST00000578569 FYCO1Q9BQS8 1478 aa10.45□□□□□ -0.74
EIF4A1-210ENST00000578569 NEUROD1Q13562 356 aa10.45□□□□□ -0.74
EIF4A1-210ENST00000578569 BCL11AQ9H165 835 aa10.45□□□□□ -0.74
EIF4A1-210ENST00000578569 HECW1Q76N89 1606 aa10.44□□□□□ -0.74
EIF4A1-210ENST00000578569 MAPKBP1O60336 1514 aa10.44□□□□□ -0.74
EIF4A1-210ENST00000578569 ERICH6Q7L0X2 663 aa10.44□□□□□ -0.74
EIF4A1-210ENST00000578569 ATP10BO94823 1461 aa10.43□□□□□ -0.74
EIF4A1-210ENST00000578569 CCDC18Q5T9S5 1454 aa10.42□□□□□ -0.74
EIF4A1-210ENST00000578569 EPRSP07814 1512 aaKnown RBP10.42□□□□□ -0.74
EIF4A1-210ENST00000578569 PCF11O94913 1555 aaKnown RBP10.41□□□□□ -0.74
EIF4A1-210ENST00000578569 CDK11AQ9UQ88 783 aaPredicted RBP10.41□□□□□ -0.74
EIF4A1-210ENST00000578569 ASXL2Q76L83 1435 aa10.4□□□□□ -0.75
EIF4A1-210ENST00000578569 WDR7Q9Y4E6 1490 aa10.39□□□□□ -0.75
EIF4A1-210ENST00000578569 PLEKHD1A6NEE1 506 aa10.39□□□□□ -0.75
EIF4A1-210ENST00000578569 ATP1B4Q9UN42 357 aaPredicted RBP10.39□□□□□ -0.75
EIF4A1-210ENST00000578569 ZCCHC11Q5TAX3 1644 aaKnown RBP10.39□□□□□ -0.75
EIF4A1-210ENST00000578569 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.38□□□□□ -0.75
EIF4A1-210ENST00000578569 ZBTB22O15209 634 aa10.38□□□□□ -0.75
EIF4A1-210ENST00000578569 HNRNPUL2Q1KMD3 747 aaKnown RBP10.38□□□□□ -0.75
EIF4A1-210ENST00000578569 ABCC10Q5T3U5 1492 aa10.37□□□□□ -0.75
EIF4A1-210ENST00000578569 FOXD4L1Q9NU39 408 aa10.37□□□□□ -0.75
EIF4A1-210ENST00000578569 MAP3K1Q13233 1512 aa10.37□□□□□ -0.75
EIF4A1-210ENST00000578569 CDK13Q14004 1512 aaKnown RBP10.36□□□□□ -0.75
EIF4A1-210ENST00000578569 ARID3CA6NKF2 412 aa10.35□□□□□ -0.75
EIF4A1-210ENST00000578569 TROQ12816 1431 aaPredicted RBP10.34□□□□□ -0.75
EIF4A1-210ENST00000578569 APLP2Q06481 763 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms