RNA–Protein interactions for RNA: ENST00000578569.1

EIF4A1-210, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-210ENST00000578569 AEBP2Q6ZN18 517 aaPredicted RBP15.76■□□□□ 0.11
EIF4A1-210ENST00000578569 NISCHQ9Y2I1 1504 aa15.65■□□□□ 0.1
EIF4A1-210ENST00000578569 CHIC1Q5VXU3 224 aa15.65■□□□□ 0.1
EIF4A1-210ENST00000578569 CCDC180Q9P1Z9 1646 aa13.82□□□□□ -0.2
EIF4A1-210ENST00000578569 PHF23Q9BUL5 403 aaPredicted RBP13.76□□□□□ -0.21
EIF4A1-210ENST00000578569 SENP3Q9H4L4 574 aaPredicted RBP13.4□□□□□ -0.26
EIF4A1-210ENST00000578569 ABCC9O60706 1549 aa13.33□□□□□ -0.28
EIF4A1-210ENST00000578569 ZCCHC6Q5VYS8 1495 aaKnown RBP13.09□□□□□ -0.31
EIF4A1-210ENST00000578569 MYO15BQ96JP2 1530 aa13.03□□□□□ -0.32
EIF4A1-210ENST00000578569 DCAF1Q9Y4B6 1507 aa13.01□□□□□ -0.33
EIF4A1-210ENST00000578569 NACADO15069 1562 aa12.99□□□□□ -0.33
EIF4A1-210ENST00000578569 DCAF8L2P0C7V8 631 aa12.94□□□□□ -0.34
EIF4A1-210ENST00000578569 RB1CC1Q8TDY2 1594 aa12.94□□□□□ -0.34
EIF4A1-210ENST00000578569 PLPPR3Q6T4P5 718 aa12.85□□□□□ -0.35
EIF4A1-210ENST00000578569 SCRIBQ14160 1630 aa12.56□□□□□ -0.4
EIF4A1-210ENST00000578569 SHROOM4Q9ULL8 1493 aa12.52□□□□□ -0.41
EIF4A1-210ENST00000578569 BICRAQ9NZM4 1560 aa12.5□□□□□ -0.41
EIF4A1-210ENST00000578569 UNC13AQ9UPW8 1703 aa12.5□□□□□ -0.41
EIF4A1-210ENST00000578569 PABPN1Q86U42 306 aaKnown RBP eCLIP12.47□□□□□ -0.41
EIF4A1-210ENST00000578569 FOXD1Q16676 465 aa12.37□□□□□ -0.43
EIF4A1-210ENST00000578569 EIF4G1Q04637 1599 aaKnown RBP12.18□□□□□ -0.46
EIF4A1-210ENST00000578569 BAZ1AQ9NRL2 1556 aaPredicted RBP12.13□□□□□ -0.47
EIF4A1-210ENST00000578569 CECR2Q9BXF3 1484 aa12.13□□□□□ -0.47
EIF4A1-210ENST00000578569 ADRA2BP18089 450 aa12.1□□□□□ -0.47
EIF4A1-210ENST00000578569 PPP6R1Q9UPN7 881 aa12.07□□□□□ -0.48
EIF4A1-210ENST00000578569 SMARCA4P51532 1647 aa12.07□□□□□ -0.48
EIF4A1-210ENST00000578569 DNAJC5BQ9UF47 199 aa12.06□□□□□ -0.48
EIF4A1-210ENST00000578569 CC2D2AQ9P2K1 1620 aa12.06□□□□□ -0.48
EIF4A1-210ENST00000578569 MROH2BQ7Z745 1585 aa12.02□□□□□ -0.49
EIF4A1-210ENST00000578569 NCAPD3P42695 1498 aa12.01□□□□□ -0.49
EIF4A1-210ENST00000578569 ATAD2BQ9ULI0 1458 aa12.01□□□□□ -0.49
EIF4A1-210ENST00000578569 SMARCA2P51531 1590 aa12.01□□□□□ -0.49
EIF4A1-210ENST00000578569 PEG3Q9GZU2 1588 aa12.01□□□□□ -0.49
EIF4A1-210ENST00000578569 RSF1Q96T23 1441 aaPredicted RBP11.99□□□□□ -0.49
EIF4A1-210ENST00000578569 HMGXB3Q12766 1538 aa11.95□□□□□ -0.5
EIF4A1-210ENST00000578569 PELP1Q8IZL8 1130 aaKnown RBP11.93□□□□□ -0.5
EIF4A1-210ENST00000578569 BAZ1BQ9UIG0 1483 aaKnown RBP11.91□□□□□ -0.5
EIF4A1-210ENST00000578569 WIZO95785 1651 aa11.86□□□□□ -0.51
EIF4A1-210ENST00000578569 TOP2AP11388 1531 aaKnown RBP11.82□□□□□ -0.52
EIF4A1-210ENST00000578569 SUPT5HO00267 1087 aaKnown RBP11.75□□□□□ -0.53
EIF4A1-210ENST00000578569 PIAS4Q8N2W9 510 aaPredicted RBP11.75□□□□□ -0.53
EIF4A1-210ENST00000578569 MYT1Q01538 1121 aa11.72□□□□□ -0.53
EIF4A1-210ENST00000578569 CCDC88BA6NC98 1476 aa11.66□□□□□ -0.54
EIF4A1-210ENST00000578569 CADPSQ9ULU8 1353 aa11.66□□□□□ -0.54
EIF4A1-210ENST00000578569 LAMC3Q9Y6N6 1575 aa11.62□□□□□ -0.55
EIF4A1-210ENST00000578569 CFTRP13569 1480 aa11.62□□□□□ -0.55
EIF4A1-210ENST00000578569 PDS5BQ9NTI5 1447 aa11.58□□□□□ -0.56
EIF4A1-210ENST00000578569 NESP48681 1621 aa11.57□□□□□ -0.56
EIF4A1-210ENST00000578569 ERCC6Q03468 1493 aa11.51□□□□□ -0.57
EIF4A1-210ENST00000578569 FANCD2Q9BXW9 1451 aa11.49□□□□□ -0.57
EIF4A1-210ENST00000578569 CEP164Q9UPV0 1460 aa11.46□□□□□ -0.57
EIF4A1-210ENST00000578569 HRCP23327 699 aa11.44□□□□□ -0.58
EIF4A1-210ENST00000578569 PRDM2Q13029 1718 aa11.42□□□□□ -0.58
EIF4A1-210ENST00000578569 MRC2Q9UBG0 1479 aa11.42□□□□□ -0.58
EIF4A1-210ENST00000578569 ABCC8Q09428 1581 aa11.38□□□□□ -0.59
EIF4A1-210ENST00000578569 KIF21AQ7Z4S6 1674 aa11.38□□□□□ -0.59
EIF4A1-210ENST00000578569 THOC2Q8NI27 1593 aaKnown RBP11.37□□□□□ -0.59
EIF4A1-210ENST00000578569 WDR62O43379 1518 aa11.37□□□□□ -0.59
EIF4A1-210ENST00000578569 CUX2O14529 1486 aa11.37□□□□□ -0.59
EIF4A1-210ENST00000578569 MSH5O43196 834 aa11.36□□□□□ -0.59
EIF4A1-210ENST00000578569 PPP4R3CPQ6ZMV5 832 aa11.34□□□□□ -0.59
EIF4A1-210ENST00000578569 URB2Q14146 1524 aaKnown RBP11.34□□□□□ -0.59
EIF4A1-210ENST00000578569 TOPBP1Q92547 1522 aa11.32□□□□□ -0.6
EIF4A1-210ENST00000578569 DNMBPQ6XZF7 1577 aa11.32□□□□□ -0.6
EIF4A1-210ENST00000578569 KCNA4P22459 653 aa11.31□□□□□ -0.6
EIF4A1-210ENST00000578569 WRNQ14191 1432 aaPredicted RBP eCLIP11.31□□□□□ -0.6
EIF4A1-210ENST00000578569 CUX1P39880 1505 aa11.27□□□□□ -0.61
EIF4A1-210ENST00000578569 POLA1P09884 1462 aaPredicted RBP11.24□□□□□ -0.61
EIF4A1-210ENST00000578569 IFT140Q96RY7 1462 aa11.24□□□□□ -0.61
EIF4A1-210ENST00000578569 TOP2BQ02880 1626 aa11.24□□□□□ -0.61
EIF4A1-210ENST00000578569 FGD5Q6ZNL6 1462 aa11.22□□□□□ -0.61
EIF4A1-210ENST00000578569 BIVM-ERCC5R4GMW8 1640 aa11.21□□□□□ -0.61
EIF4A1-210ENST00000578569 SYNJ1O43426 1573 aa11.2□□□□□ -0.62
EIF4A1-210ENST00000578569 SOGA1O94964 1423 aa11.2□□□□□ -0.62
EIF4A1-210ENST00000578569 TTBK1Q5TCY1 1321 aaPredicted RBP11.17□□□□□ -0.62
EIF4A1-210ENST00000578569 ABCA10Q8WWZ4 1543 aa11.16□□□□□ -0.62
EIF4A1-210ENST00000578569 NCBP3Q53F19 620 aaKnown RBP11.16□□□□□ -0.62
EIF4A1-210ENST00000578569 WDR97A6NE52 1622 aa11.16□□□□□ -0.62
EIF4A1-210ENST00000578569 RAD54L2Q9Y4B4 1467 aa11.15□□□□□ -0.62
EIF4A1-210ENST00000578569 TARBP1Q13395 1621 aaKnown RBP11.15□□□□□ -0.62
EIF4A1-210ENST00000578569 SCAF1Q9H7N4 1312 aaKnown RBP11.14□□□□□ -0.63
EIF4A1-210ENST00000578569 TRIM41Q8WV44 630 aa11.14□□□□□ -0.63
EIF4A1-210ENST00000578569 ZNF608Q9ULD9 1512 aaPredicted RBP11.11□□□□□ -0.63
EIF4A1-210ENST00000578569 TDRD9Q8NDG6 1382 aaKnown RBP11.09□□□□□ -0.63
EIF4A1-210ENST00000578569 AQRO60306 1485 aaKnown RBP eCLIP11.07□□□□□ -0.643e-11■■■■□ 26.4
EIF4A1-210ENST00000578569 GAPVD1Q14C86 1478 aa11.07□□□□□ -0.64
EIF4A1-210ENST00000578569 KIF27Q86VH2 1401 aa11.07□□□□□ -0.64
EIF4A1-210ENST00000578569 EIF4G3O43432 1585 aaKnown RBP11.07□□□□□ -0.64
EIF4A1-210ENST00000578569 GRIN2BQ13224 1484 aa11.06□□□□□ -0.64
EIF4A1-210ENST00000578569 ABCA5Q8WWZ7 1642 aa11.06□□□□□ -0.64
EIF4A1-210ENST00000578569 MAGI1Q96QZ7 1491 aaPredicted RBP11.03□□□□□ -0.64
EIF4A1-210ENST00000578569 ERICH3Q5RHP9 1530 aa11.03□□□□□ -0.64
EIF4A1-210ENST00000578569 EEA1Q15075 1411 aa11.01□□□□□ -0.65
EIF4A1-210ENST00000578569 IGF1RP08069 1367 aa11□□□□□ -0.65
EIF4A1-210ENST00000578569 SNAPC4Q5SXM2 1469 aa11□□□□□ -0.65
EIF4A1-210ENST00000578569 CNKSR2Q8WXI2 1034 aa10.98□□□□□ -0.65
EIF4A1-210ENST00000578569 FHAD1B1AJZ9 1412 aa10.98□□□□□ -0.65
EIF4A1-210ENST00000578569 SYNJ2O15056 1496 aa10.97□□□□□ -0.65
EIF4A1-210ENST00000578569 PBRM1Q86U86 1689 aa10.95□□□□□ -0.66
EIF4A1-210ENST00000578569 ADAMTS12P58397 1594 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms