RNA–Protein interactions for RNA: ENST00000578307.1

BPTF-211, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 2

Gene BPTF, Length 2,121 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-211ENST00000578307 ABCA5Q8WWZ7 1642 aa14.45□□□□□ -0.1
BPTF-211ENST00000578307 MAP3K1Q13233 1512 aa14.42□□□□□ -0.1
BPTF-211ENST00000578307 FHAD1B1AJZ9 1412 aa14.41□□□□□ -0.1
BPTF-211ENST00000578307 EFCAB5A4FU69 1503 aa14.41□□□□□ -0.1
BPTF-211ENST00000578307 TIAM1Q13009 1591 aa14.41□□□□□ -0.1
BPTF-211ENST00000578307 GAPVD1Q14C86 1478 aa14.4□□□□□ -0.1
BPTF-211ENST00000578307 RRBP1Q9P2E9 1410 aaKnown RBP14.39□□□□□ -0.11
BPTF-211ENST00000578307 TDRD9Q8NDG6 1382 aaKnown RBP14.39□□□□□ -0.11
BPTF-211ENST00000578307 TARBP1Q13395 1621 aaKnown RBP14.38□□□□□ -0.11
BPTF-211ENST00000578307 CFAP43Q8NDM7 1665 aa14.36□□□□□ -0.11
BPTF-211ENST00000578307 PCF11O94913 1555 aaKnown RBP14.36□□□□□ -0.11
BPTF-211ENST00000578307 MRC2Q9UBG0 1479 aa14.35□□□□□ -0.11
BPTF-211ENST00000578307 FHOD3Q2V2M9 1422 aa14.33□□□□□ -0.11
BPTF-211ENST00000578307 CCNB3Q8WWL7 1395 aa14.33□□□□□ -0.12
BPTF-211ENST00000578307 P3H3Q8IVL6 736 aa14.33□□□□□ -0.12
BPTF-211ENST00000578307 PBRM1Q86U86 1689 aa14.33□□□□□ -0.12
BPTF-211ENST00000578307 LRRC9Q6ZRR7 1453 aa14.32□□□□□ -0.12
BPTF-211ENST00000578307 FYCO1Q9BQS8 1478 aa14.32□□□□□ -0.12
BPTF-211ENST00000578307 AQRO60306 1485 aaKnown RBP eCLIP14.31□□□□□ -0.12
BPTF-211ENST00000578307 CASKIN1Q8WXD9 1431 aa14.3□□□□□ -0.12
BPTF-211ENST00000578307 FMN1Q68DA7 1419 aa14.29□□□□□ -0.12
BPTF-211ENST00000578307 SAMD9Q5K651 1589 aa14.29□□□□□ -0.12
BPTF-211ENST00000578307 ERICH6Q7L0X2 663 aa14.29□□□□□ -0.12
BPTF-211ENST00000578307 ATP1B4Q9UN42 357 aaPredicted RBP14.27□□□□□ -0.13
BPTF-211ENST00000578307 CLSPNQ9HAW4 1339 aa14.25□□□□□ -0.13
BPTF-211ENST00000578307 WDR62O43379 1518 aa14.25□□□□□ -0.13
BPTF-211ENST00000578307 PRKCSHP14314 528 aaPredicted RBP14.24□□□□□ -0.13
BPTF-211ENST00000578307 ADAMTS12P58397 1594 aa14.24□□□□□ -0.13
BPTF-211ENST00000578307 IFT140Q96RY7 1462 aa14.23□□□□□ -0.13
BPTF-211ENST00000578307 DHX57Q6P158 1386 aaKnown RBP14.23□□□□□ -0.13
BPTF-211ENST00000578307 ACIN1Q9UKV3 1341 aaKnown RBP14.23□□□□□ -0.13
BPTF-211ENST00000578307 BCL11AQ9H165 835 aa14.23□□□□□ -0.13
BPTF-211ENST00000578307 GRIN2BQ13224 1484 aa14.22□□□□□ -0.13
BPTF-211ENST00000578307 SNAPC4Q5SXM2 1469 aa14.22□□□□□ -0.13
BPTF-211ENST00000578307 PHLDB1Q86UU1 1377 aa14.22□□□□□ -0.13
BPTF-211ENST00000578307 CENPBP07199 599 aaPredicted RBP14.22□□□□□ -0.13
BPTF-211ENST00000578307 ITGAEP38570 1179 aa14.2□□□□□ -0.14
BPTF-211ENST00000578307 THOC2Q8NI27 1593 aaKnown RBP14.19□□□□□ -0.14
BPTF-211ENST00000578307 ZNF316A6NFI3 1004 aaPredicted RBP14.19□□□□□ -0.14
BPTF-211ENST00000578307 DIEXFQ68CQ4 756 aaKnown RBP14.19□□□□□ -0.14
BPTF-211ENST00000578307 IQGAP2Q13576 1575 aa14.18□□□□□ -0.14
BPTF-211ENST00000578307 ERCC6Q03468 1493 aa14.17□□□□□ -0.14
BPTF-211ENST00000578307 LRRIQ1Q96JM4 1722 aa14.17□□□□□ -0.14
BPTF-211ENST00000578307 ZNF608Q9ULD9 1512 aaPredicted RBP14.15□□□□□ -0.14
BPTF-211ENST00000578307 FAM50AQ14320 339 aaKnown RBP14.15□□□□□ -0.14
BPTF-211ENST00000578307 MTUS2Q5JR59 1369 aa14.14□□□□□ -0.15
BPTF-211ENST00000578307 RAB3GAP2Q9H2M9 1393 aa14.13□□□□□ -0.15
BPTF-211ENST00000578307 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.13□□□□□ -0.15
BPTF-211ENST00000578307 EIF4G3O43432 1585 aaKnown RBP14.12□□□□□ -0.15
BPTF-211ENST00000578307 SETD5Q9C0A6 1442 aa14.12□□□□□ -0.15
BPTF-211ENST00000578307 CCDC18Q5T9S5 1454 aa14.11□□□□□ -0.15
BPTF-211ENST00000578307 SUPT6HQ7KZ85 1726 aaKnown RBP14.11□□□□□ -0.15
BPTF-211ENST00000578307 HECW1Q76N89 1606 aa14.11□□□□□ -0.15
BPTF-211ENST00000578307 EHBP1L1Q8N3D4 1523 aa14.11□□□□□ -0.15
BPTF-211ENST00000578307 FGD6Q6ZV73 1430 aa14.09□□□□□ -0.15
BPTF-211ENST00000578307 UGGT2Q9NYU1 1516 aa14.09□□□□□ -0.15
BPTF-211ENST00000578307 KIAA0586Q9BVV6 1533 aa14.07□□□□□ -0.16
BPTF-211ENST00000578307 NCOA2Q15596 1464 aa14.07□□□□□ -0.16
BPTF-211ENST00000578307 GRIN2AQ12879 1464 aa14.06□□□□□ -0.16
BPTF-211ENST00000578307 SENP3Q9H4L4 574 aaPredicted RBP14.05□□□□□ -0.16
BPTF-211ENST00000578307 MAGI1Q96QZ7 1491 aaPredicted RBP14.04□□□□□ -0.16
BPTF-211ENST00000578307 MYOM3Q5VTT5 1437 aa14.04□□□□□ -0.16
BPTF-211ENST00000578307 KIAA0556O60303 1618 aa14.03□□□□□ -0.16
BPTF-211ENST00000578307 MAPKBP1O60336 1514 aa14.03□□□□□ -0.16
BPTF-211ENST00000578307 EPRSP07814 1512 aaKnown RBP14.03□□□□□ -0.16
BPTF-211ENST00000578307 ARHGEF11O15085 1522 aa14.02□□□□□ -0.17
BPTF-211ENST00000578307 MAGI3Q5TCQ9 1506 aa14.02□□□□□ -0.17
BPTF-211ENST00000578307 PTPN23Q9H3S7 1636 aa14□□□□□ -0.17
BPTF-211ENST00000578307 SYNJ2O15056 1496 aa14□□□□□ -0.17
BPTF-211ENST00000578307 GTF3C3Q9Y5Q9 886 aa14□□□□□ -0.17
BPTF-211ENST00000578307 DISP1Q96F81 1524 aa14□□□□□ -0.17
BPTF-211ENST00000578307 KCNA4P22459 653 aa13.99□□□□□ -0.17
BPTF-211ENST00000578307 CDK13Q14004 1512 aaKnown RBP13.98□□□□□ -0.17
BPTF-211ENST00000578307 NEUROD1Q13562 356 aa13.98□□□□□ -0.17
BPTF-211ENST00000578307 CHMP7Q8WUX9 453 aaPredicted RBP13.97□□□□□ -0.17
BPTF-211ENST00000578307 CEP170Q5SW79 1584 aa13.96□□□□□ -0.17
BPTF-211ENST00000578307 RAPGEF6Q8TEU7 1601 aa13.96□□□□□ -0.17
BPTF-211ENST00000578307 HFM1A2PYH4 1435 aa13.95□□□□□ -0.18
BPTF-211ENST00000578307 TCOF1Q13428 1488 aaKnown RBP13.95□□□□□ -0.18
BPTF-211ENST00000578307 PTPRKQ15262 1439 aa13.94□□□□□ -0.18
BPTF-211ENST00000578307 MIA2Q96PC5 1412 aa13.92□□□□□ -0.18
BPTF-211ENST00000578307 FBLN2P98095 1184 aa13.92□□□□□ -0.18
BPTF-211ENST00000578307 NUP153P49790 1475 aaKnown RBP13.91□□□□□ -0.18
BPTF-211ENST00000578307 NUP160Q12769 1436 aa13.91□□□□□ -0.18
BPTF-211ENST00000578307 NAIPQ13075 1403 aa13.9□□□□□ -0.18
BPTF-211ENST00000578307 ARID3CA6NKF2 412 aa13.9□□□□□ -0.18
BPTF-211ENST00000578307 TIMELESSQ9UNS1 1208 aa13.9□□□□□ -0.18
BPTF-211ENST00000578307 CARMIL2Q6F5E8 1435 aa13.89□□□□□ -0.19
BPTF-211ENST00000578307 UACAQ9BZF9 1416 aa13.89□□□□□ -0.19
BPTF-211ENST00000578307 CDK11AQ9UQ88 783 aaPredicted RBP13.89□□□□□ -0.19
BPTF-211ENST00000578307 GCC2Q8IWJ2 1684 aa13.89□□□□□ -0.19
BPTF-211ENST00000578307 ADRA2BP18089 450 aa13.88□□□□□ -0.19
BPTF-211ENST00000578307 MIER1Q8N108 512 aa13.88□□□□□ -0.19
BPTF-211ENST00000578307 SIN3AQ96ST3 1273 aa13.88□□□□□ -0.19
BPTF-211ENST00000578307 ANP32EQ9BTT0 268 aa13.87□□□□□ -0.19
BPTF-211ENST00000578307 AKNAQ7Z591 1439 aa13.86□□□□□ -0.19
BPTF-211ENST00000578307 JPH4Q96JJ6 628 aa13.85□□□□□ -0.19
BPTF-211ENST00000578307 PLB1Q6P1J6 1458 aa13.83□□□□□ -0.2
BPTF-211ENST00000578307 ITSN2Q9NZM3 1697 aa13.82□□□□□ -0.2
BPTF-211ENST00000578307 TROQ12816 1431 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms