RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 KIF27Q86VH2 1401 aa21.98■■□□□ 1.11
SMARCD2-207ENST00000578234 RUSC2Q8N2Y8 1516 aa21.98■■□□□ 1.11
SMARCD2-207ENST00000578234 KIAA0586Q9BVV6 1533 aa21.92■■□□□ 1.1
SMARCD2-207ENST00000578234 CUL7Q14999 1698 aa21.91■■□□□ 1.1
SMARCD2-207ENST00000578234 NPM1P06748 294 aaKnown RBP eCLIP21.85■■□□□ 1.09
SMARCD2-207ENST00000578234 KIF13AQ9H1H9 1805 aa21.84■■□□□ 1.09
SMARCD2-207ENST00000578234 CARMIL1Q5VZK9 1371 aa21.83■■□□□ 1.08
SMARCD2-207ENST00000578234 TTBK1Q5TCY1 1321 aaPredicted RBP21.82■■□□□ 1.08
SMARCD2-207ENST00000578234 ADCY10Q96PN6 1610 aa21.78■■□□□ 1.08
SMARCD2-207ENST00000578234 MAPKBP1O60336 1514 aa21.78■■□□□ 1.08
SMARCD2-207ENST00000578234 ABCC10Q5T3U5 1492 aa21.77■■□□□ 1.08
SMARCD2-207ENST00000578234 FAM69CQ0P6D2 419 aa21.76■■□□□ 1.07
SMARCD2-207ENST00000578234 PTPRGP23470 1445 aa21.72■■□□□ 1.07
SMARCD2-207ENST00000578234 CARMIL2Q6F5E8 1435 aa21.71■■□□□ 1.07
SMARCD2-207ENST00000578234 DIP2BQ9P265 1576 aa21.69■■□□□ 1.06
SMARCD2-207ENST00000578234 TNIKQ9UKE5 1360 aa21.68■■□□□ 1.06
SMARCD2-207ENST00000578234 IQGAP2Q13576 1575 aa21.67■■□□□ 1.06
SMARCD2-207ENST00000578234 RAPGEF2Q9Y4G8 1499 aa21.62■■□□□ 1.05
SMARCD2-207ENST00000578234 TSPOAP1O95153 1857 aa21.61■■□□□ 1.05
SMARCD2-207ENST00000578234 ABCC2Q92887 1545 aa21.6■■□□□ 1.05
SMARCD2-207ENST00000578234 DISP1Q96F81 1524 aa21.59■■□□□ 1.05
SMARCD2-207ENST00000578234 UHRF1BP1LA0JNW5 1464 aa21.57■■□□□ 1.04
SMARCD2-207ENST00000578234 UGGT2Q9NYU1 1516 aa21.55■■□□□ 1.04
SMARCD2-207ENST00000578234 UACAQ9BZF9 1416 aa21.55■■□□□ 1.04
SMARCD2-207ENST00000578234 PLB1Q6P1J6 1458 aa21.53■■□□□ 1.04
SMARCD2-207ENST00000578234 ASXL2Q76L83 1435 aa21.52■■□□□ 1.04
SMARCD2-207ENST00000578234 KDM6BO15054 1643 aa21.51■■□□□ 1.03
SMARCD2-207ENST00000578234 KDM5BQ9UGL1 1544 aa21.47■■□□□ 1.03
SMARCD2-207ENST00000578234 GLI2P10070 1586 aa21.47■■□□□ 1.03
SMARCD2-207ENST00000578234 KIAA0556O60303 1618 aa21.47■■□□□ 1.03
SMARCD2-207ENST00000578234 CTTNBP2Q8WZ74 1663 aa21.41■■□□□ 1.02
SMARCD2-207ENST00000578234 PRXQ9BXM0 1461 aa21.4■■□□□ 1.02
SMARCD2-207ENST00000578234 EPRSP07814 1512 aaKnown RBP21.39■■□□□ 1.01
SMARCD2-207ENST00000578234 GOLGA3Q08378 1498 aa21.39■■□□□ 1.01
SMARCD2-207ENST00000578234 PPRC1Q5VV67 1664 aaKnown RBP21.38■■□□□ 1.01
SMARCD2-207ENST00000578234 ZCCHC11Q5TAX3 1644 aaKnown RBP21.38■■□□□ 1.01
SMARCD2-207ENST00000578234 KDM4FA0A1W2PPD8 638 aa21.34■■□□□ 1.01
SMARCD2-207ENST00000578234 MAP3K4Q9Y6R4 1608 aa21.33■■□□□ 1.01
SMARCD2-207ENST00000578234 WDR7Q9Y4E6 1490 aa21.31■■□□□ 1
SMARCD2-207ENST00000578234 TEX14Q8IWB6 1497 aa21.3■■□□□ 1
SMARCD2-207ENST00000578234 ABCA8O94911 1581 aa21.29■■□□□ 1
SMARCD2-207ENST00000578234 COL17A1Q9UMD9 1497 aaPredicted RBP21.27■■□□□ 1
SMARCD2-207ENST00000578234 CSRNP3Q8WYN3 585 aa21.26■□□□□ 0.99
SMARCD2-207ENST00000578234 FAM9AQ8IZU1 332 aaPredicted RBP21.24■□□□□ 0.99
SMARCD2-207ENST00000578234 KCNH8Q96L42 1107 aa21.23■□□□□ 0.99
SMARCD2-207ENST00000578234 CD109Q6YHK3 1445 aa21.19■□□□□ 0.98
SMARCD2-207ENST00000578234 MAGI3Q5TCQ9 1506 aa21.19■□□□□ 0.98
SMARCD2-207ENST00000578234 ARID3CA6NKF2 412 aa21.18■□□□□ 0.98
SMARCD2-207ENST00000578234 P3H3Q8IVL6 736 aa21.18■□□□□ 0.98
SMARCD2-207ENST00000578234 CFAP43Q8NDM7 1665 aa21.18■□□□□ 0.98
SMARCD2-207ENST00000578234 EEA1Q15075 1411 aa21.14■□□□□ 0.98
SMARCD2-207ENST00000578234 ATP10BO94823 1461 aa21.13■□□□□ 0.97
SMARCD2-207ENST00000578234 ADGRL1O94910 1474 aa21.13■□□□□ 0.97
SMARCD2-207ENST00000578234 SAMD9Q5K651 1589 aa21.12■□□□□ 0.97
SMARCD2-207ENST00000578234 RANGAP1P46060 587 aaPredicted RBP21.11■□□□□ 0.97
SMARCD2-207ENST00000578234 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.06■□□□□ 0.96
SMARCD2-207ENST00000578234 HNRNPUL2Q1KMD3 747 aaKnown RBP21.06■□□□□ 0.96
SMARCD2-207ENST00000578234 RAPGEF6Q8TEU7 1601 aa21.04■□□□□ 0.96
SMARCD2-207ENST00000578234 ARAP3Q8WWN8 1544 aa21.03■□□□□ 0.96
SMARCD2-207ENST00000578234 PHLDB1Q86UU1 1377 aa21.01■□□□□ 0.95
SMARCD2-207ENST00000578234 ABCA9Q8IUA7 1624 aa21.01■□□□□ 0.95
SMARCD2-207ENST00000578234 NUP153P49790 1475 aaKnown RBP20.98■□□□□ 0.95
SMARCD2-207ENST00000578234 FHOD3Q2V2M9 1422 aa20.96■□□□□ 0.95
SMARCD2-207ENST00000578234 KIF21BO75037 1637 aa20.95■□□□□ 0.94
SMARCD2-207ENST00000578234 NEO1Q92859 1461 aa20.93■□□□□ 0.94
SMARCD2-207ENST00000578234 PLEKHD1A6NEE1 506 aa20.92■□□□□ 0.94
SMARCD2-207ENST00000578234 EFCAB5A4FU69 1503 aa20.92■□□□□ 0.94
SMARCD2-207ENST00000578234 EHMT2Q96KQ7 1210 aa20.91■□□□□ 0.94
SMARCD2-207ENST00000578234 RAPGEF3O95398 923 aa20.88■□□□□ 0.93
SMARCD2-207ENST00000578234 ILDR1Q86SU0 546 aaPredicted RBP20.88■□□□□ 0.93
SMARCD2-207ENST00000578234 HECW2Q9P2P5 1572 aa20.84■□□□□ 0.93
SMARCD2-207ENST00000578234 ARID4BQ4LE39 1312 aaPredicted RBP20.82■□□□□ 0.92
SMARCD2-207ENST00000578234 UBTFP17480 764 aaKnown RBP20.82■□□□□ 0.92
SMARCD2-207ENST00000578234 CHIC1Q5VXU3 224 aa20.81■□□□□ 0.92
SMARCD2-207ENST00000578234 FRMPD1Q5SYB0 1578 aa20.8■□□□□ 0.92
SMARCD2-207ENST00000578234 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.79■□□□□ 0.92
SMARCD2-207ENST00000578234 ATP1B4Q9UN42 357 aaPredicted RBP20.79■□□□□ 0.92
SMARCD2-207ENST00000578234 FANCAO15360 1455 aa20.78■□□□□ 0.92
SMARCD2-207ENST00000578234 AKNAQ7Z591 1439 aa20.78■□□□□ 0.92
SMARCD2-207ENST00000578234 DENND4BO75064 1496 aaPredicted RBP20.77■□□□□ 0.92
SMARCD2-207ENST00000578234 PLPPR3Q6T4P5 718 aa20.76■□□□□ 0.91
SMARCD2-207ENST00000578234 FMN1Q68DA7 1419 aa20.76■□□□□ 0.91
SMARCD2-207ENST00000578234 ADAMTSL3P82987 1691 aa20.76■□□□□ 0.91
SMARCD2-207ENST00000578234 CDK13Q14004 1512 aaKnown RBP20.75■□□□□ 0.91
SMARCD2-207ENST00000578234 CFAP74Q9C0B2 1584 aa20.75■□□□□ 0.91
SMARCD2-207ENST00000578234 RICTORQ6R327 1708 aa20.73■□□□□ 0.91
SMARCD2-207ENST00000578234 TTC37Q6PGP7 1564 aa20.73■□□□□ 0.91
SMARCD2-207ENST00000578234 ARHGAP35Q9NRY4 1499 aa20.73■□□□□ 0.91
SMARCD2-207ENST00000578234 PTPRMP28827 1452 aa20.72■□□□□ 0.91
SMARCD2-207ENST00000578234 BCORL1Q5H9F3 1711 aa20.7■□□□□ 0.9
SMARCD2-207ENST00000578234 PLCH2O75038 1416 aa20.7■□□□□ 0.9
SMARCD2-207ENST00000578234 HECW1Q76N89 1606 aa20.69■□□□□ 0.9
SMARCD2-207ENST00000578234 CDK11AQ9UQ88 783 aaPredicted RBP20.69■□□□□ 0.9
SMARCD2-207ENST00000578234 ARHGEF40Q8TER5 1519 aa20.68■□□□□ 0.9
SMARCD2-207ENST00000578234 ZMYM4Q5VZL5 1548 aa20.67■□□□□ 0.9
SMARCD2-207ENST00000578234 MAGI2Q86UL8 1455 aa20.65■□□□□ 0.9
SMARCD2-207ENST00000578234 MADDQ8WXG6 1647 aa20.64■□□□□ 0.89
SMARCD2-207ENST00000578234 SCAPERQ9BY12 1400 aa20.63■□□□□ 0.89
SMARCD2-207ENST00000578234 EFCAB2Q5VUJ9 269 aa20.63■□□□□ 0.89
SMARCD2-207ENST00000578234 YEATS2Q9ULM3 1422 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms