RNA–Protein interactions for RNA: ENST00000578218.5

THRA-208, Transcript of thyroid hormone receptor alpha, human

TSL 4

Gene THRA, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
THRA-208	ENST00000578218	KIF27	Q86VH2	1401 aa		43.78	■■■■■ 4.6
THRA-208	ENST00000578218	KIF13A	Q9H1H9	1805 aa		43.68	■■■■■ 4.58
THRA-208	ENST00000578218	IGF1R	P08069	1367 aa		43.65	■■■■■ 4.58
THRA-208	ENST00000578218	KIAA0586	Q9BVV6	1533 aa		43.62	■■■■■ 4.57
THRA-208	ENST00000578218	ADCY10	Q96PN6	1610 aa		43.52	■■■■■ 4.56
THRA-208	ENST00000578218	MAPKBP1	O60336	1514 aa		43.46	■■■■■ 4.55
THRA-208	ENST00000578218	NPM1	P06748	294 aa	Known RBP eCLIP	43.43	■■■■■ 4.54
THRA-208	ENST00000578218	CARMIL1	Q5VZK9	1371 aa		43.41	■■■■■ 4.54
THRA-208	ENST00000578218	AEBP2	Q6ZN18	517 aa	Predicted RBP	43.39	■■■■■ 4.54
THRA-208	ENST00000578218	ABCC10	Q5T3U5	1492 aa		43.38	■■■■■ 4.53
THRA-208	ENST00000578218	DIP2B	Q9P265	1576 aa		43.36	■■■■■ 4.53
THRA-208	ENST00000578218	IQGAP2	Q13576	1575 aa		43.31	■■■■■ 4.52
THRA-208	ENST00000578218	FAM69C	Q0P6D2	419 aa		43.27	■■■■■ 4.52
THRA-208	ENST00000578218	CARMIL2	Q6F5E8	1435 aa		43.22	■■■■■ 4.51
THRA-208	ENST00000578218	PTPRG	P23470	1445 aa		43.21	■■■■■ 4.51
THRA-208	ENST00000578218	TTBK1	Q5TCY1	1321 aa	Predicted RBP	43.15	■■■■■ 4.5
THRA-208	ENST00000578218	TNIK	Q9UKE5	1360 aa		43.15	■■■■■ 4.5
THRA-208	ENST00000578218	TSPOAP1	O95153	1857 aa		43.1	■■■■■ 4.49
THRA-208	ENST00000578218	RAPGEF2	Q9Y4G8	1499 aa		43.08	■■■■■ 4.49
THRA-208	ENST00000578218	ABCC2	Q92887	1545 aa		43.05	■■■■■ 4.48
THRA-208	ENST00000578218	KDM6B	O15054	1643 aa		43.03	■■■■■ 4.48
THRA-208	ENST00000578218	DISP1	Q96F81	1524 aa		43.01	■■■■■ 4.48
THRA-208	ENST00000578218	UGGT2	Q9NYU1	1516 aa		42.96	■■■■■ 4.47
THRA-208	ENST00000578218	UHRF1BP1L	A0JNW5	1464 aa		42.94	■■■■■ 4.46
THRA-208	ENST00000578218	KIAA0556	O60303	1618 aa		42.93	■■■■■ 4.46
THRA-208	ENST00000578218	CTTNBP2	Q8WZ74	1663 aa		42.92	■■■■■ 4.46
THRA-208	ENST00000578218	UACA	Q9BZF9	1416 aa		42.9	■■■■■ 4.46
THRA-208	ENST00000578218	ASXL2	Q76L83	1435 aa		42.88	■■■■■ 4.46
THRA-208	ENST00000578218	PLB1	Q6P1J6	1458 aa		42.87	■■■■■ 4.45
THRA-208	ENST00000578218	GLI2	P10070	1586 aa		42.81	■■■■■ 4.44
THRA-208	ENST00000578218	ZCCHC11	Q5TAX3	1644 aa	Known RBP	42.78	■■■■■ 4.44
THRA-208	ENST00000578218	PPRC1	Q5VV67	1664 aa	Known RBP	42.76	■■■■■ 4.44
THRA-208	ENST00000578218	KDM5B	Q9UGL1	1544 aa		42.75	■■■■■ 4.43
THRA-208	ENST00000578218	EPRS	P07814	1512 aa	Known RBP	42.64	■■■■■ 4.42
THRA-208	ENST00000578218	MAP3K4	Q9Y6R4	1608 aa		42.63	■■■■■ 4.41
THRA-208	ENST00000578218	GOLGA3	Q08378	1498 aa		42.62	■■■■■ 4.41
THRA-208	ENST00000578218	PRX	Q9BXM0	1461 aa		42.58	■■■■■ 4.41
THRA-208	ENST00000578218	WDR7	Q9Y4E6	1490 aa		42.5	■■■■■ 4.39
THRA-208	ENST00000578218	TEX14	Q8IWB6	1497 aa		42.49	■■■■■ 4.39
THRA-208	ENST00000578218	ABCA8	O94911	1581 aa		42.48	■■■■■ 4.39
THRA-208	ENST00000578218	KDM4F	A0A1W2PPD8	638 aa		42.39	■■■■■ 4.38
THRA-208	ENST00000578218	CFAP43	Q8NDM7	1665 aa		42.34	■■■■■ 4.37
THRA-208	ENST00000578218	COL17A1	Q9UMD9	1497 aa	Predicted RBP	42.31	■■■■■ 4.36
THRA-208	ENST00000578218	ADGRL1	O94910	1474 aa		42.22	■■■■■ 4.35
THRA-208	ENST00000578218	SAMD9	Q5K651	1589 aa		42.2	■■■■■ 4.35
THRA-208	ENST00000578218	CD109	Q6YHK3	1445 aa		42.19	■■■■■ 4.34
THRA-208	ENST00000578218	MAGI3	Q5TCQ9	1506 aa		42.18	■■■■■ 4.34
THRA-208	ENST00000578218	FAM9A	Q8IZU1	332 aa	Predicted RBP	42.17	■■■■■ 4.34
THRA-208	ENST00000578218	KCNH8	Q96L42	1107 aa		42.16	■■■■■ 4.34
THRA-208	ENST00000578218	CSRNP3	Q8WYN3	585 aa		42.15	■■■■■ 4.34
THRA-208	ENST00000578218	P3H3	Q8IVL6	736 aa		42.14	■■■■■ 4.34
THRA-208	ENST00000578218	EEA1	Q15075	1411 aa		42.1	■■■■■ 4.33
THRA-208	ENST00000578218	RAPGEF6	Q8TEU7	1601 aa		42.07	■■■■■ 4.33
THRA-208	ENST00000578218	ARID3C	A6NKF2	412 aa		42.07	■■■■■ 4.33
THRA-208	ENST00000578218	ATP10B	O94823	1461 aa		42.04	■■■■■ 4.32
THRA-208	ENST00000578218	ABCA9	Q8IUA7	1624 aa		41.95	■■■■■ 4.31
THRA-208	ENST00000578218	FHOD3	Q2V2M9	1422 aa		41.86	■■■■■ 4.29
THRA-208	ENST00000578218	RANGAP1	P46060	587 aa	Predicted RBP	41.86	■■■■■ 4.29
THRA-208	ENST00000578218	KIF21B	O75037	1637 aa		41.86	■■■■■ 4.29
THRA-208	ENST00000578218	ARAP3	Q8WWN8	1544 aa		41.84	■■■■■ 4.29
THRA-208	ENST00000578218	NUP153	P49790	1475 aa	Known RBP	41.83	■■■■■ 4.29
THRA-208	ENST00000578218	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	41.82	■■■■■ 4.29
THRA-208	ENST00000578218	HNRNPUL2	Q1KMD3	747 aa	Known RBP	41.82	■■■■■ 4.29
THRA-208	ENST00000578218	EFCAB5	A4FU69	1503 aa		41.78	■■■■■ 4.28
THRA-208	ENST00000578218	PHLDB1	Q86UU1	1377 aa		41.71	■■■■■ 4.27
THRA-208	ENST00000578218	HECW2	Q9P2P5	1572 aa		41.7	■■■■■ 4.27
THRA-208	ENST00000578218	NEO1	Q92859	1461 aa		41.69	■■■■■ 4.26
THRA-208	ENST00000578218	FRMPD1	Q5SYB0	1578 aa		41.59	■■■■■ 4.25
THRA-208	ENST00000578218	CFAP74	Q9C0B2	1584 aa		41.55	■■■■■ 4.24
THRA-208	ENST00000578218	PLEKHD1	A6NEE1	506 aa		41.52	■■■■■ 4.24
THRA-208	ENST00000578218	RAPGEF3	O95398	923 aa		41.52	■■■■■ 4.24
THRA-208	ENST00000578218	TTC37	Q6PGP7	1564 aa		41.49	■■■■■ 4.23
THRA-208	ENST00000578218	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	41.49	■■■■■ 4.23
THRA-208	ENST00000578218	CDK13	Q14004	1512 aa	Known RBP	41.47	■■■■■ 4.23
THRA-208	ENST00000578218	RICTOR	Q6R327	1708 aa		41.44	■■■■■ 4.22
THRA-208	ENST00000578218	EHMT2	Q96KQ7	1210 aa		41.44	■■■■■ 4.22
THRA-208	ENST00000578218	ADAMTSL3	P82987	1691 aa		41.44	■■■■■ 4.22
THRA-208	ENST00000578218	ARHGEF40	Q8TER5	1519 aa		41.44	■■■■■ 4.22
THRA-208	ENST00000578218	FANCA	O15360	1455 aa		41.42	■■■■■ 4.22
THRA-208	ENST00000578218	HECW1	Q76N89	1606 aa		41.41	■■■■■ 4.22
THRA-208	ENST00000578218	UBTF	P17480	764 aa	Known RBP	41.4	■■■■■ 4.22
THRA-208	ENST00000578218	BCORL1	Q5H9F3	1711 aa		41.39	■■■■■ 4.22
THRA-208	ENST00000578218	DENND4B	O75064	1496 aa	Predicted RBP	41.39	■■■■■ 4.22
THRA-208	ENST00000578218	AKNA	Q7Z591	1439 aa		41.36	■■■■■ 4.21
THRA-208	ENST00000578218	FMN1	Q68DA7	1419 aa		41.35	■■■■■ 4.21
THRA-208	ENST00000578218	PTPRM	P28827	1452 aa		41.31	■■■■■ 4.2
THRA-208	ENST00000578218	MADD	Q8WXG6	1647 aa		41.31	■■■■■ 4.2
THRA-208	ENST00000578218	ARHGAP35	Q9NRY4	1499 aa		41.31	■■■■■ 4.2
THRA-208	ENST00000578218	ARID4B	Q4LE39	1312 aa	Predicted RBP	41.29	■■■■■ 4.2
THRA-208	ENST00000578218	CHIC1	Q5VXU3	224 aa		41.28	■■■■■ 4.2
THRA-208	ENST00000578218	ZMYM4	Q5VZL5	1548 aa		41.27	■■■■■ 4.2
THRA-208	ENST00000578218	ATP1B4	Q9UN42	357 aa	Predicted RBP	41.24	■■■■■ 4.19
THRA-208	ENST00000578218	MYO5C	Q9NQX4	1742 aa		41.24	■■■■■ 4.19
THRA-208	ENST00000578218	ZFYVE16	Q7Z3T8	1539 aa		41.21	■■■■■ 4.19
THRA-208	ENST00000578218	ILDR1	Q86SU0	546 aa	Predicted RBP	41.19	■■■■■ 4.18
THRA-208	ENST00000578218	RIMS1	Q86UR5	1692 aa	Known RBP	41.19	■■■■■ 4.18
THRA-208	ENST00000578218	KIF14	Q15058	1648 aa		41.18	■■■■■ 4.18
THRA-208	ENST00000578218	PLCH2	O75038	1416 aa		41.15	■■■■■ 4.18
THRA-208	ENST00000578218	POGZ	Q7Z3K3	1410 aa		41.11	■■■■■ 4.17
THRA-208	ENST00000578218	LRRIQ1	Q96JM4	1722 aa		41.11	■■■■■ 4.17

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms