RNA–Protein interactions for RNA: ENST00000578218.5

THRA-208, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 4

Gene THRA, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-208ENST00000578218 NISCHQ9Y2I1 1504 aa62.66■■■■■ 7.62
THRA-208ENST00000578218 CCDC180Q9P1Z9 1646 aa56.39■■■■■ 6.62
THRA-208ENST00000578218 ABCC9O60706 1549 aa56.27■■■■■ 6.6
THRA-208ENST00000578218 RB1CC1Q8TDY2 1594 aa53.62■■■■■ 6.17
THRA-208ENST00000578218 NACADO15069 1562 aa53.21■■■■■ 6.11
THRA-208ENST00000578218 DCAF8L2P0C7V8 631 aa52.81■■■■■ 6.04
THRA-208ENST00000578218 DNAJC5BQ9UF47 199 aa52.56■■■■■ 6
THRA-208ENST00000578218 UNC13AQ9UPW8 1703 aa52.49■■■■■ 5.99
THRA-208ENST00000578218 MYO15BQ96JP2 1530 aa52.43■■■■■ 5.98
THRA-208ENST00000578218 PABPN1Q86U42 306 aaKnown RBP eCLIP52.27■■■■■ 5.96
THRA-208ENST00000578218 BICRAQ9NZM4 1560 aa52■■■■■ 5.91
THRA-208ENST00000578218 ZCCHC6Q5VYS8 1495 aaKnown RBP51.99■■■■■ 5.91
THRA-208ENST00000578218 DCAF1Q9Y4B6 1507 aa51.77■■■■■ 5.88
THRA-208ENST00000578218 SCRIBQ14160 1630 aa51.37■■■■■ 5.81
THRA-208ENST00000578218 SHROOM4Q9ULL8 1493 aa51.35■■■■■ 5.81
THRA-208ENST00000578218 CC2D2AQ9P2K1 1620 aa50.87■■■■■ 5.73
THRA-208ENST00000578218 EIF4G1Q04637 1599 aaKnown RBP50.77■■■■■ 5.72
THRA-208ENST00000578218 CECR2Q9BXF3 1484 aa50.68■■■■■ 5.7
THRA-208ENST00000578218 NCAPD3P42695 1498 aa49.02■■■■■ 5.44
THRA-208ENST00000578218 SMARCA4P51532 1647 aa48.98■■■■■ 5.43
THRA-208ENST00000578218 ATAD2BQ9ULI0 1458 aa48.92■■■■■ 5.42
THRA-208ENST00000578218 SMARCA2P51531 1590 aa48.87■■■■■ 5.41
THRA-208ENST00000578218 HMGXB3Q12766 1538 aa48.8■■■■■ 5.4
THRA-208ENST00000578218 BAZ1AQ9NRL2 1556 aaPredicted RBP48.71■■■■■ 5.39
THRA-208ENST00000578218 ERCC6Q03468 1493 aa48.65■■■■■ 5.38
THRA-208ENST00000578218 CUX2O14529 1486 aa48.53■■■■■ 5.36
THRA-208ENST00000578218 BAZ1BQ9UIG0 1483 aaKnown RBP48.53■■■■■ 5.36
THRA-208ENST00000578218 PEG3Q9GZU2 1588 aa48.45■■■■■ 5.35
THRA-208ENST00000578218 NESP48681 1621 aa48.32■■■■■ 5.33
THRA-208ENST00000578218 DNAJC5Q9H3Z4 198 aa48.31■■■■■ 5.32
THRA-208ENST00000578218 MROH2BQ7Z745 1585 aa48.28■■■■■ 5.32
THRA-208ENST00000578218 LAMC3Q9Y6N6 1575 aa48.06■■■■■ 5.28
THRA-208ENST00000578218 THOC2Q8NI27 1593 aaKnown RBP47.95■■■■■ 5.27
THRA-208ENST00000578218 KIF21AQ7Z4S6 1674 aa47.84■■■■■ 5.25
THRA-208ENST00000578218 WIZO95785 1651 aa47.77■■■■■ 5.24
THRA-208ENST00000578218 PDS5BQ9NTI5 1447 aa47.71■■■■■ 5.23
THRA-208ENST00000578218 CADPSQ9ULU8 1353 aa47.54■■■■■ 5.2
THRA-208ENST00000578218 MRC2Q9UBG0 1479 aa47.35■■■■■ 5.17
THRA-208ENST00000578218 WDR62O43379 1518 aa47.25■■■■■ 5.15
THRA-208ENST00000578218 RSF1Q96T23 1441 aaPredicted RBP47.22■■■■■ 5.15
THRA-208ENST00000578218 CEP164Q9UPV0 1460 aa47.18■■■■■ 5.14
THRA-208ENST00000578218 TOP2AP11388 1531 aaKnown RBP47.18■■■■■ 5.14
THRA-208ENST00000578218 FANCD2Q9BXW9 1451 aa47.08■■■■■ 5.13
THRA-208ENST00000578218 CFTRP13569 1480 aa47.02■■■■■ 5.12
THRA-208ENST00000578218 PRDM2Q13029 1718 aa46.81■■■■■ 5.08
THRA-208ENST00000578218 URB2Q14146 1524 aaKnown RBP46.68■■■■■ 5.06
THRA-208ENST00000578218 CCDC88BA6NC98 1476 aa46.54■■■■■ 5.04
THRA-208ENST00000578218 TRIM41Q8WV44 630 aa46.32■■■■■ 5.01
THRA-208ENST00000578218 IFT140Q96RY7 1462 aa46.19■■■■■ 4.99
THRA-208ENST00000578218 TOPBP1Q92547 1522 aa46.19■■■■■ 4.99
THRA-208ENST00000578218 OSCARQ8IYS5 282 aa46.16■■■■■ 4.98
THRA-208ENST00000578218 ZNF608Q9ULD9 1512 aaPredicted RBP46.09■■■■■ 4.97
THRA-208ENST00000578218 ABCC8Q09428 1581 aa46.08■■■■■ 4.97
THRA-208ENST00000578218 DNMBPQ6XZF7 1577 aa46.08■■■■■ 4.97
THRA-208ENST00000578218 EIF4G3O43432 1585 aaKnown RBP45.97■■■■■ 4.95
THRA-208ENST00000578218 TARBP1Q13395 1621 aaKnown RBP45.81■■■■■ 4.92
THRA-208ENST00000578218 RIMBP3CA6NJZ7 1639 aa45.75■■■■■ 4.91
THRA-208ENST00000578218 RIMBP3BA6NNM3 1639 aa45.75■■■■■ 4.91
THRA-208ENST00000578218 RIMBP3Q9UFD9 1639 aa45.75■■■■■ 4.91
THRA-208ENST00000578218 POLA1P09884 1462 aaPredicted RBP45.72■■■■■ 4.91
THRA-208ENST00000578218 CHD1O14646 1710 aa45.66■■■■■ 4.9
THRA-208ENST00000578218 AQRO60306 1485 aaKnown RBP eCLIP45.63■■■■■ 4.92e-6■■■■□ 25.7
THRA-208ENST00000578218 ARHGEF11O15085 1522 aa45.57■■■■■ 4.89
THRA-208ENST00000578218 RAD54L2Q9Y4B4 1467 aa45.51■■■■■ 4.88
THRA-208ENST00000578218 FGD5Q6ZNL6 1462 aa45.45■■■■■ 4.87
THRA-208ENST00000578218 SOGA1O94964 1423 aa45.44■■■■■ 4.87
THRA-208ENST00000578218 WDR97A6NE52 1622 aa45.41■■■■■ 4.86
THRA-208ENST00000578218 CUX1P39880 1505 aa45.4■■■■■ 4.86
THRA-208ENST00000578218 FBLN2P98095 1184 aa45.34■■■■■ 4.85
THRA-208ENST00000578218 TDRD9Q8NDG6 1382 aaKnown RBP45.33■■■■■ 4.85
THRA-208ENST00000578218 SNAPC4Q5SXM2 1469 aa45.28■■■■■ 4.84
THRA-208ENST00000578218 MAGI1Q96QZ7 1491 aaPredicted RBP45.14■■■■■ 4.82
THRA-208ENST00000578218 GRIN2BQ13224 1484 aa45.11■■■■■ 4.81
THRA-208ENST00000578218 ARAP1Q96P48 1450 aa45.11■■■■■ 4.81
THRA-208ENST00000578218 SUPT5HO00267 1087 aaKnown RBP45.11■■■■■ 4.81
THRA-208ENST00000578218 PBRM1Q86U86 1689 aa45.1■■■■■ 4.81
THRA-208ENST00000578218 CYB5RLQ6IPT4 315 aa45.1■■■■■ 4.81
THRA-208ENST00000578218 SYNJ1O43426 1573 aa45.07■■■■■ 4.8
THRA-208ENST00000578218 CLASP1Q7Z460 1538 aa45.04■■■■■ 4.8
THRA-208ENST00000578218 CHMP7Q8WUX9 453 aaPredicted RBP44.99■■■■■ 4.79
THRA-208ENST00000578218 SYNJ2O15056 1496 aa44.98■■■■■ 4.79
THRA-208ENST00000578218 GAPVD1Q14C86 1478 aa44.95■■■■■ 4.79
THRA-208ENST00000578218 ABCA5Q8WWZ7 1642 aa44.93■■■■■ 4.78
THRA-208ENST00000578218 ABCA10Q8WWZ4 1543 aa44.91■■■■■ 4.78
THRA-208ENST00000578218 BIVM-ERCC5R4GMW8 1640 aa44.75■■■■■ 4.75
THRA-208ENST00000578218 TOP2BQ02880 1626 aa44.71■■■■■ 4.75
THRA-208ENST00000578218 WRNQ14191 1432 aaPredicted RBP eCLIP44.7■■■■■ 4.75
THRA-208ENST00000578218 TRHP20396 242 aaPredicted RBP44.66■■■■■ 4.74
THRA-208ENST00000578218 ADAMTS12P58397 1594 aa44.61■■■■■ 4.73
THRA-208ENST00000578218 GRIN2AQ12879 1464 aa44.55■■■■■ 4.72
THRA-208ENST00000578218 CEP170Q5SW79 1584 aa44.42■■■■■ 4.7
THRA-208ENST00000578218 ERICH3Q5RHP9 1530 aa44.38■■■■■ 4.69
THRA-208ENST00000578218 FHAD1B1AJZ9 1412 aa44.36■■■■■ 4.69
THRA-208ENST00000578218 NUP160Q12769 1436 aa44.36■■■■■ 4.69
THRA-208ENST00000578218 ERCC6L2Q5T890 1561 aa44.31■■■■■ 4.68
THRA-208ENST00000578218 SHROOM2Q13796 1616 aa44.24■■■■■ 4.67
THRA-208ENST00000578218 RUSC2Q8N2Y8 1516 aa43.99■■■■■ 4.63
THRA-208ENST00000578218 PRG4Q92954 1404 aaPredicted RBP43.92■■■■■ 4.62
THRA-208ENST00000578218 CUL7Q14999 1698 aa43.82■■■■■ 4.61
THRA-208ENST00000578218 JPH4Q96JJ6 628 aa43.79■■■■■ 4.6
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms