RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 CUX1P39880 1505 aa18.93■□□□□ 0.62
CDK5RAP3-204ENST00000577664 ABCA5Q8WWZ7 1642 aa18.92■□□□□ 0.62
CDK5RAP3-204ENST00000577664 CHIC1Q5VXU3 224 aa18.92■□□□□ 0.62
CDK5RAP3-204ENST00000577664 TOP2BQ02880 1626 aa18.9■□□□□ 0.62
CDK5RAP3-204ENST00000577664 BIVM-ERCC5R4GMW8 1640 aa18.89■□□□□ 0.61
CDK5RAP3-204ENST00000577664 ABCA10Q8WWZ4 1543 aa18.88■□□□□ 0.61
CDK5RAP3-204ENST00000577664 NPM1P06748 294 aaKnown RBP eCLIP18.84■□□□□ 0.61
CDK5RAP3-204ENST00000577664 PRG4Q92954 1404 aaPredicted RBP18.83■□□□□ 0.61
CDK5RAP3-204ENST00000577664 ADAMTS12P58397 1594 aa18.83■□□□□ 0.6
CDK5RAP3-204ENST00000577664 TSPOAP1O95153 1857 aa18.82■□□□□ 0.6
CDK5RAP3-204ENST00000577664 LMTK3Q96Q04 1460 aa18.81■□□□□ 0.6
CDK5RAP3-204ENST00000577664 ADCY10Q96PN6 1610 aa18.78■□□□□ 0.6
CDK5RAP3-204ENST00000577664 FHAD1B1AJZ9 1412 aa18.75■□□□□ 0.59
CDK5RAP3-204ENST00000577664 JPH4Q96JJ6 628 aa18.74■□□□□ 0.59
CDK5RAP3-204ENST00000577664 SOCS7O14512 581 aa18.71■□□□□ 0.59
CDK5RAP3-204ENST00000577664 PPRC1Q5VV67 1664 aaKnown RBP18.7■□□□□ 0.58
CDK5RAP3-204ENST00000577664 COL17A1Q9UMD9 1497 aaPredicted RBP18.65■□□□□ 0.58
CDK5RAP3-204ENST00000577664 GLI2P10070 1586 aa18.64■□□□□ 0.58
CDK5RAP3-204ENST00000577664 ERICH3Q5RHP9 1530 aa18.62■□□□□ 0.57
CDK5RAP3-204ENST00000577664 RUSC2Q8N2Y8 1516 aa18.61■□□□□ 0.57
CDK5RAP3-204ENST00000577664 ILDR2Q71H61 639 aa18.6■□□□□ 0.57
CDK5RAP3-204ENST00000577664 KIF27Q86VH2 1401 aa18.56■□□□□ 0.56
CDK5RAP3-204ENST00000577664 EEA1Q15075 1411 aa18.55■□□□□ 0.56
CDK5RAP3-204ENST00000577664 PLB1Q6P1J6 1458 aa18.53■□□□□ 0.56
CDK5RAP3-204ENST00000577664 ASXL2Q76L83 1435 aa18.5■□□□□ 0.55
CDK5RAP3-204ENST00000577664 IGF1RP08069 1367 aa18.5■□□□□ 0.55
CDK5RAP3-204ENST00000577664 ABCC2Q92887 1545 aa18.49■□□□□ 0.55
CDK5RAP3-204ENST00000577664 TEX14Q8IWB6 1497 aa18.47■□□□□ 0.55
CDK5RAP3-204ENST00000577664 MAP3K4Q9Y6R4 1608 aa18.47■□□□□ 0.55
CDK5RAP3-204ENST00000577664 DISP3Q9P2K9 1392 aa18.45■□□□□ 0.54
CDK5RAP3-204ENST00000577664 CSRNP3Q8WYN3 585 aa18.44■□□□□ 0.54
CDK5RAP3-204ENST00000577664 KIAA0586Q9BVV6 1533 aa18.42■□□□□ 0.54
CDK5RAP3-204ENST00000577664 EPRSP07814 1512 aaKnown RBP18.4■□□□□ 0.54
CDK5RAP3-204ENST00000577664 PTPRGP23470 1445 aa18.4■□□□□ 0.54
CDK5RAP3-204ENST00000577664 UHRF1BP1LA0JNW5 1464 aa18.38■□□□□ 0.53
CDK5RAP3-204ENST00000577664 PRXQ9BXM0 1461 aa18.37■□□□□ 0.53
CDK5RAP3-204ENST00000577664 CARMIL1Q5VZK9 1371 aa18.35■□□□□ 0.53
CDK5RAP3-204ENST00000577664 PTPRMP28827 1452 aa18.34■□□□□ 0.53
CDK5RAP3-204ENST00000577664 CUL7Q14999 1698 aa18.34■□□□□ 0.53
CDK5RAP3-204ENST00000577664 PCF11O94913 1555 aaKnown RBP18.34■□□□□ 0.53
CDK5RAP3-204ENST00000577664 FAM9AQ8IZU1 332 aaPredicted RBP18.31■□□□□ 0.52
CDK5RAP3-204ENST00000577664 CERKQ8TCT0 537 aa18.31■□□□□ 0.52
CDK5RAP3-204ENST00000577664 ADAMTSL3P82987 1691 aa18.3■□□□□ 0.52
CDK5RAP3-204ENST00000577664 KIF21BO75037 1637 aa18.3■□□□□ 0.52
CDK5RAP3-204ENST00000577664 TNIKQ9UKE5 1360 aa18.3■□□□□ 0.52
CDK5RAP3-204ENST00000577664 KDM5BQ9UGL1 1544 aa18.29■□□□□ 0.52
CDK5RAP3-204ENST00000577664 RAPGEF2Q9Y4G8 1499 aa18.27■□□□□ 0.52
CDK5RAP3-204ENST00000577664 SPATA31D1Q6ZQQ2 1576 aa18.25■□□□□ 0.51
CDK5RAP3-204ENST00000577664 UACAQ9BZF9 1416 aa18.25■□□□□ 0.51
CDK5RAP3-204ENST00000577664 MAGI3Q5TCQ9 1506 aa18.24■□□□□ 0.51
CDK5RAP3-204ENST00000577664 CARMIL2Q6F5E8 1435 aa18.23■□□□□ 0.51
CDK5RAP3-204ENST00000577664 ZCCHC11Q5TAX3 1644 aaKnown RBP18.17■□□□□ 0.5
CDK5RAP3-204ENST00000577664 GOLGA3Q08378 1498 aa18.17■□□□□ 0.5
CDK5RAP3-204ENST00000577664 WDR7Q9Y4E6 1490 aa18.16■□□□□ 0.5
CDK5RAP3-204ENST00000577664 CFAP43Q8NDM7 1665 aa18.15■□□□□ 0.5
CDK5RAP3-204ENST00000577664 CD109Q6YHK3 1445 aa18.15■□□□□ 0.5
CDK5RAP3-204ENST00000577664 ARAP3Q8WWN8 1544 aa18.14■□□□□ 0.49
CDK5RAP3-204ENST00000577664 TTBK1Q5TCY1 1321 aaPredicted RBP18.14■□□□□ 0.49
CDK5RAP3-204ENST00000577664 BCORL1Q5H9F3 1711 aa18.12■□□□□ 0.49
CDK5RAP3-204ENST00000577664 MADDQ8WXG6 1647 aa18.1■□□□□ 0.49
CDK5RAP3-204ENST00000577664 LOC105371045A0A1W2PR82 267 aa18.09■□□□□ 0.49
CDK5RAP3-204ENST00000577664 HSPA2P54652 639 aa18.08■□□□□ 0.48
CDK5RAP3-204ENST00000577664 DISP1Q96F81 1524 aa18.08■□□□□ 0.48
CDK5RAP3-204ENST00000577664 UBTFP17480 764 aaKnown RBP18.05■□□□□ 0.48
CDK5RAP3-204ENST00000577664 IQGAP2Q13576 1575 aa18.04■□□□□ 0.48
CDK5RAP3-204ENST00000577664 PHLDB1Q86UU1 1377 aa18■□□□□ 0.47
CDK5RAP3-204ENST00000577664 CTTNBP2Q8WZ74 1663 aa17.99■□□□□ 0.47
CDK5RAP3-204ENST00000577664 RIMS1Q86UR5 1692 aaKnown RBP17.97■□□□□ 0.47
CDK5RAP3-204ENST00000577664 UGGT2Q9NYU1 1516 aa17.97■□□□□ 0.47
CDK5RAP3-204ENST00000577664 EHMT2Q96KQ7 1210 aa17.93■□□□□ 0.46
CDK5RAP3-204ENST00000577664 KCNH8Q96L42 1107 aa17.92■□□□□ 0.46
CDK5RAP3-204ENST00000577664 KIAA0556O60303 1618 aa17.91■□□□□ 0.46
CDK5RAP3-204ENST00000577664 ARID4BQ4LE39 1312 aaPredicted RBP17.9■□□□□ 0.46
CDK5RAP3-204ENST00000577664 YEATS2Q9ULM3 1422 aa17.89■□□□□ 0.46
CDK5RAP3-204ENST00000577664 FRMPD1Q5SYB0 1578 aa17.88■□□□□ 0.45
CDK5RAP3-204ENST00000577664 RAPGEF3O95398 923 aa17.88■□□□□ 0.45
CDK5RAP3-204ENST00000577664 DMRT2Q9Y5R5 561 aa17.88■□□□□ 0.45
CDK5RAP3-204ENST00000577664 IQSEC2Q5JU85 1478 aa17.88■□□□□ 0.45
CDK5RAP3-204ENST00000577664 EFCAB5A4FU69 1503 aa17.87■□□□□ 0.45
CDK5RAP3-204ENST00000577664 CEP162Q5TB80 1403 aa17.86■□□□□ 0.45
CDK5RAP3-204ENST00000577664 NEO1Q92859 1461 aa17.86■□□□□ 0.45
CDK5RAP3-204ENST00000577664 SAMD9Q5K651 1589 aa17.86■□□□□ 0.45
CDK5RAP3-204ENST00000577664 STRCQ7RTU9 1775 aa17.85■□□□□ 0.45
CDK5RAP3-204ENST00000577664 ARHGEF40Q8TER5 1519 aa17.85■□□□□ 0.45
CDK5RAP3-204ENST00000577664 ABCA8O94911 1581 aa17.84■□□□□ 0.45
CDK5RAP3-204ENST00000577664 ARHGAP35Q9NRY4 1499 aa17.84■□□□□ 0.45
CDK5RAP3-204ENST00000577664 CLIP1P30622 1438 aa17.84■□□□□ 0.45
CDK5RAP3-204ENST00000577664 ABCA9Q8IUA7 1624 aa17.83■□□□□ 0.44
CDK5RAP3-204ENST00000577664 TTC37Q6PGP7 1564 aa17.81■□□□□ 0.44
CDK5RAP3-204ENST00000577664 PREX1Q8TCU6 1659 aa17.8■□□□□ 0.44
CDK5RAP3-204ENST00000577664 LTBP4Q8N2S1 1624 aa17.8■□□□□ 0.44
CDK5RAP3-204ENST00000577664 POGZQ7Z3K3 1410 aa17.8■□□□□ 0.44
CDK5RAP3-204ENST00000577664 PTPRTO14522 1441 aa17.79■□□□□ 0.44
CDK5RAP3-204ENST00000577664 FANCAO15360 1455 aa17.78■□□□□ 0.44
CDK5RAP3-204ENST00000577664 RANGAP1P46060 587 aaPredicted RBP17.73■□□□□ 0.43
CDK5RAP3-204ENST00000577664 SIGLEC1Q9BZZ2 1709 aa17.72■□□□□ 0.43
CDK5RAP3-204ENST00000577664 FER1L4A9Z1Z3 1794 aa17.72■□□□□ 0.43
CDK5RAP3-204ENST00000577664 PLPPR3Q6T4P5 718 aa17.72■□□□□ 0.43
CDK5RAP3-204ENST00000577664 FMN1Q68DA7 1419 aa17.72■□□□□ 0.43
CDK5RAP3-204ENST00000577664 P3H3Q8IVL6 736 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms