RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 UBTFP17480 764 aaKnown RBP13.92□□□□□ -0.18
PRPF8-213ENST00000576407 CTTNBP2Q8WZ74 1663 aa13.91□□□□□ -0.18
PRPF8-213ENST00000576407 CLASP1Q7Z460 1538 aa13.91□□□□□ -0.18
PRPF8-213ENST00000576407 KIAA0586Q9BVV6 1533 aa13.91□□□□□ -0.18
PRPF8-213ENST00000576407 LOC105371045A0A1W2PR82 267 aa13.91□□□□□ -0.18
PRPF8-213ENST00000576407 IQGAP2Q13576 1575 aa13.88□□□□□ -0.19
PRPF8-213ENST00000576407 TNIKQ9UKE5 1360 aa13.85□□□□□ -0.19
PRPF8-213ENST00000576407 JPH4Q96JJ6 628 aa13.84□□□□□ -0.19
PRPF8-213ENST00000576407 SHROOM2Q13796 1616 aa13.83□□□□□ -0.2
PRPF8-213ENST00000576407 UGGT2Q9NYU1 1516 aa13.81□□□□□ -0.2
PRPF8-213ENST00000576407 AEBP2Q6ZN18 517 aaPredicted RBP13.81□□□□□ -0.2
PRPF8-213ENST00000576407 RANGAP1P46060 587 aaPredicted RBP13.8□□□□□ -0.2
PRPF8-213ENST00000576407 PRG4Q92954 1404 aaPredicted RBP13.79□□□□□ -0.2
PRPF8-213ENST00000576407 DISP1Q96F81 1524 aa13.77□□□□□ -0.21
PRPF8-213ENST00000576407 ERCC6L2Q5T890 1561 aa13.76□□□□□ -0.21
PRPF8-213ENST00000576407 CARMIL2Q6F5E8 1435 aa13.75□□□□□ -0.21
PRPF8-213ENST00000576407 KIAA0556O60303 1618 aa13.75□□□□□ -0.21
PRPF8-213ENST00000576407 SAMD9Q5K651 1589 aa13.75□□□□□ -0.21
PRPF8-213ENST00000576407 CEP162Q5TB80 1403 aa13.74□□□□□ -0.21
PRPF8-213ENST00000576407 EFCAB5A4FU69 1503 aa13.74□□□□□ -0.21
PRPF8-213ENST00000576407 ARHGEF11O15085 1522 aa13.74□□□□□ -0.21
PRPF8-213ENST00000576407 CLIP1P30622 1438 aa13.73□□□□□ -0.21
PRPF8-213ENST00000576407 P3H3Q8IVL6 736 aa13.72□□□□□ -0.21
PRPF8-213ENST00000576407 ARHGAP35Q9NRY4 1499 aa13.72□□□□□ -0.21
PRPF8-213ENST00000576407 RIMBP3CA6NJZ7 1639 aa13.71□□□□□ -0.22
PRPF8-213ENST00000576407 RIMBP3BA6NNM3 1639 aa13.71□□□□□ -0.22
PRPF8-213ENST00000576407 RIMBP3Q9UFD9 1639 aa13.71□□□□□ -0.22
PRPF8-213ENST00000576407 FHOD3Q2V2M9 1422 aa13.69□□□□□ -0.22
PRPF8-213ENST00000576407 ARAP1Q96P48 1450 aa13.67□□□□□ -0.22
PRPF8-213ENST00000576407 TTBK1Q5TCY1 1321 aaPredicted RBP13.66□□□□□ -0.22
PRPF8-213ENST00000576407 PTPRGP23470 1445 aa13.66□□□□□ -0.22
PRPF8-213ENST00000576407 FMN1Q68DA7 1419 aa13.61□□□□□ -0.23
PRPF8-213ENST00000576407 CYB5RLQ6IPT4 315 aa13.6□□□□□ -0.23
PRPF8-213ENST00000576407 PLB1Q6P1J6 1458 aa13.59□□□□□ -0.23
PRPF8-213ENST00000576407 ABCA8O94911 1581 aa13.58□□□□□ -0.24
PRPF8-213ENST00000576407 UACAQ9BZF9 1416 aa13.57□□□□□ -0.24
PRPF8-213ENST00000576407 RAPGEF6Q8TEU7 1601 aa13.56□□□□□ -0.24
PRPF8-213ENST00000576407 VPS8Q8N3P4 1428 aa13.56□□□□□ -0.24
PRPF8-213ENST00000576407 UHRF1BP1LA0JNW5 1464 aa13.55□□□□□ -0.24
PRPF8-213ENST00000576407 ABCC2Q92887 1545 aa13.54□□□□□ -0.24
PRPF8-213ENST00000576407 PCF11O94913 1555 aaKnown RBP13.54□□□□□ -0.24
PRPF8-213ENST00000576407 ADCY10Q96PN6 1610 aa13.54□□□□□ -0.24
PRPF8-213ENST00000576407 CASKIN1Q8WXD9 1431 aa13.54□□□□□ -0.24
PRPF8-213ENST00000576407 ATP1B4Q9UN42 357 aaPredicted RBP13.52□□□□□ -0.25
PRPF8-213ENST00000576407 NUP153P49790 1475 aaKnown RBP13.52□□□□□ -0.25
PRPF8-213ENST00000576407 FYCO1Q9BQS8 1478 aa13.52□□□□□ -0.25
PRPF8-213ENST00000576407 HECW1Q76N89 1606 aa13.51□□□□□ -0.25
PRPF8-213ENST00000576407 ARID3CA6NKF2 412 aa13.49□□□□□ -0.25
PRPF8-213ENST00000576407 KDM5BQ9UGL1 1544 aa13.49□□□□□ -0.25
PRPF8-213ENST00000576407 ATP10BO94823 1461 aa13.48□□□□□ -0.25
PRPF8-213ENST00000576407 LRRIQ1Q96JM4 1722 aa13.47□□□□□ -0.25
PRPF8-213ENST00000576407 EPRSP07814 1512 aaKnown RBP13.47□□□□□ -0.25
PRPF8-213ENST00000576407 ZCCHC11Q5TAX3 1644 aaKnown RBP13.46□□□□□ -0.25
PRPF8-213ENST00000576407 NPM1P06748 294 aaKnown RBP eCLIP13.46□□□□□ -0.25
PRPF8-213ENST00000576407 CDK13Q14004 1512 aaKnown RBP13.45□□□□□ -0.26
PRPF8-213ENST00000576407 CCDC18Q5T9S5 1454 aa13.45□□□□□ -0.26
PRPF8-213ENST00000576407 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.44□□□□□ -0.26
PRPF8-213ENST00000576407 HNRNPUL2Q1KMD3 747 aaKnown RBP13.44□□□□□ -0.26
PRPF8-213ENST00000576407 TIAM1Q13009 1591 aa13.41□□□□□ -0.26
PRPF8-213ENST00000576407 CFAP43Q8NDM7 1665 aa13.4□□□□□ -0.26
PRPF8-213ENST00000576407 APLP2Q06481 763 aa13.4□□□□□ -0.26
PRPF8-213ENST00000576407 MAPKBP1O60336 1514 aa13.39□□□□□ -0.27
PRPF8-213ENST00000576407 MAP3K1Q13233 1512 aa13.39□□□□□ -0.27
PRPF8-213ENST00000576407 ASXL2Q76L83 1435 aa13.39□□□□□ -0.27
PRPF8-213ENST00000576407 CDK11AQ9UQ88 783 aaPredicted RBP13.38□□□□□ -0.27
PRPF8-213ENST00000576407 PLEKHD1A6NEE1 506 aa13.37□□□□□ -0.27
PRPF8-213ENST00000576407 MAGI3Q5TCQ9 1506 aa13.37□□□□□ -0.27
PRPF8-213ENST00000576407 WDR7Q9Y4E6 1490 aa13.36□□□□□ -0.27
PRPF8-213ENST00000576407 KANK4Q5T7N3 995 aaPredicted RBP13.35□□□□□ -0.27
PRPF8-213ENST00000576407 MTUS2Q5JR59 1369 aa13.34□□□□□ -0.27
PRPF8-213ENST00000576407 TROQ12816 1431 aaPredicted RBP13.34□□□□□ -0.27
PRPF8-213ENST00000576407 LRRC9Q6ZRR7 1453 aa13.34□□□□□ -0.27
PRPF8-213ENST00000576407 KCNH8Q96L42 1107 aa13.33□□□□□ -0.28
PRPF8-213ENST00000576407 EHBP1L1Q8N3D4 1523 aa13.33□□□□□ -0.28
PRPF8-213ENST00000576407 TRHP20396 242 aaPredicted RBP13.32□□□□□ -0.28
PRPF8-213ENST00000576407 KIF14Q15058 1648 aa13.3□□□□□ -0.28
PRPF8-213ENST00000576407 ABCC10Q5T3U5 1492 aa13.29□□□□□ -0.28
PRPF8-213ENST00000576407 PPARGC1BQ86YN6 1023 aaKnown RBP13.29□□□□□ -0.28
PRPF8-213ENST00000576407 DIP2BQ9P265 1576 aa13.28□□□□□ -0.28
PRPF8-213ENST00000576407 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.27□□□□□ -0.292e-6■□□□□ 8.3
PRPF8-213ENST00000576407 SUPT6HQ7KZ85 1726 aaKnown RBP13.27□□□□□ -0.29
PRPF8-213ENST00000576407 GLI2P10070 1586 aa13.26□□□□□ -0.29
PRPF8-213ENST00000576407 FAM69CQ0P6D2 419 aa13.26□□□□□ -0.29
PRPF8-213ENST00000576407 ABCA9Q8IUA7 1624 aa13.26□□□□□ -0.29
PRPF8-213ENST00000576407 KIF13AQ9H1H9 1805 aa13.25□□□□□ -0.29
PRPF8-213ENST00000576407 TTC37Q6PGP7 1564 aa13.25□□□□□ -0.29
PRPF8-213ENST00000576407 NCOA2Q15596 1464 aa13.25□□□□□ -0.29
PRPF8-213ENST00000576407 MAP3K4Q9Y6R4 1608 aa13.23□□□□□ -0.29
PRPF8-213ENST00000576407 CD109Q6YHK3 1445 aa13.22□□□□□ -0.29
PRPF8-213ENST00000576407 CCNB3Q8WWL7 1395 aa13.21□□□□□ -0.29
PRPF8-213ENST00000576407 GPATCH8Q9UKJ3 1502 aaKnown RBP13.2□□□□□ -0.3
PRPF8-213ENST00000576407 MYO5CQ9NQX4 1742 aa13.2□□□□□ -0.3
PRPF8-213ENST00000576407 PHLDB1Q86UU1 1377 aa13.2□□□□□ -0.3
PRPF8-213ENST00000576407 CDC42BPAQ5VT25 1732 aa13.19□□□□□ -0.3
PRPF8-213ENST00000576407 PLCH2O75038 1416 aa13.19□□□□□ -0.3
PRPF8-213ENST00000576407 PREX2Q70Z35 1606 aa13.18□□□□□ -0.3
PRPF8-213ENST00000576407 ITSN2Q9NZM3 1697 aa13.18□□□□□ -0.3
PRPF8-213ENST00000576407 CDC42BPBQ9Y5S2 1711 aa13.17□□□□□ -0.3
PRPF8-213ENST00000576407 MYOM3Q5VTT5 1437 aa13.17□□□□□ -0.3
PRPF8-213ENST00000576407 CFDP1Q9UEE9 299 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms