RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 PRG4Q92954 1404 aaPredicted RBP20.54■□□□□ 0.88
LITAF-219ENST00000576334 CUL7Q14999 1698 aa20.53■□□□□ 0.88
LITAF-219ENST00000576334 CARMIL1Q5VZK9 1371 aa20.49■□□□□ 0.87
LITAF-219ENST00000576334 KIAA0586Q9BVV6 1533 aa20.44■□□□□ 0.86
LITAF-219ENST00000576334 TTBK1Q5TCY1 1321 aaPredicted RBP20.33■□□□□ 0.85
LITAF-219ENST00000576334 RAPGEF2Q9Y4G8 1499 aa20.31■□□□□ 0.84
LITAF-219ENST00000576334 IQGAP2Q13576 1575 aa20.3■□□□□ 0.84
LITAF-219ENST00000576334 ADCY10Q96PN6 1610 aa20.3■□□□□ 0.84
LITAF-219ENST00000576334 KIF13AQ9H1H9 1805 aa20.25■□□□□ 0.83
LITAF-219ENST00000576334 PTPRGP23470 1445 aa20.23■□□□□ 0.83
LITAF-219ENST00000576334 DISP1Q96F81 1524 aa20.22■□□□□ 0.83
LITAF-219ENST00000576334 CARMIL2Q6F5E8 1435 aa20.2■□□□□ 0.82
LITAF-219ENST00000576334 TNIKQ9UKE5 1360 aa20.2■□□□□ 0.82
LITAF-219ENST00000576334 NPM1P06748 294 aaKnown RBP eCLIP20.19■□□□□ 0.82
LITAF-219ENST00000576334 PRXQ9BXM0 1461 aa20.18■□□□□ 0.82
LITAF-219ENST00000576334 UGGT2Q9NYU1 1516 aa20.17■□□□□ 0.82
LITAF-219ENST00000576334 CTTNBP2Q8WZ74 1663 aa20.16■□□□□ 0.82
LITAF-219ENST00000576334 MAPKBP1O60336 1514 aa20.14■□□□□ 0.81
LITAF-219ENST00000576334 FAM69CQ0P6D2 419 aa20.14■□□□□ 0.81
LITAF-219ENST00000576334 KIAA0556O60303 1618 aa20.13■□□□□ 0.81
LITAF-219ENST00000576334 ABCC10Q5T3U5 1492 aa20.12■□□□□ 0.81
LITAF-219ENST00000576334 DIP2BQ9P265 1576 aa20.11■□□□□ 0.81
LITAF-219ENST00000576334 FAM9AQ8IZU1 332 aaPredicted RBP20.09■□□□□ 0.81
LITAF-219ENST00000576334 CSRNP3Q8WYN3 585 aa20.09■□□□□ 0.81
LITAF-219ENST00000576334 ABCC2Q92887 1545 aa20.07■□□□□ 0.8
LITAF-219ENST00000576334 UACAQ9BZF9 1416 aa20.07■□□□□ 0.8
LITAF-219ENST00000576334 TSPOAP1O95153 1857 aa20.04■□□□□ 0.8
LITAF-219ENST00000576334 UHRF1BP1LA0JNW5 1464 aa20.04■□□□□ 0.8
LITAF-219ENST00000576334 ASXL2Q76L83 1435 aa20.02■□□□□ 0.79
LITAF-219ENST00000576334 PLB1Q6P1J6 1458 aa20.01■□□□□ 0.79
LITAF-219ENST00000576334 P3H3Q8IVL6 736 aa20.01■□□□□ 0.79
LITAF-219ENST00000576334 CHIC1Q5VXU3 224 aa19.99■□□□□ 0.79
LITAF-219ENST00000576334 ZCCHC11Q5TAX3 1644 aaKnown RBP19.98■□□□□ 0.79
LITAF-219ENST00000576334 KDM5BQ9UGL1 1544 aa19.97■□□□□ 0.79
LITAF-219ENST00000576334 GOLGA3Q08378 1498 aa19.97■□□□□ 0.79
LITAF-219ENST00000576334 RANGAP1P46060 587 aaPredicted RBP19.96■□□□□ 0.79
LITAF-219ENST00000576334 EEA1Q15075 1411 aa19.94■□□□□ 0.78
LITAF-219ENST00000576334 EHMT2Q96KQ7 1210 aa19.94■□□□□ 0.78
LITAF-219ENST00000576334 ABCA8O94911 1581 aa19.93■□□□□ 0.78
LITAF-219ENST00000576334 ARID3CA6NKF2 412 aa19.91■□□□□ 0.78
LITAF-219ENST00000576334 EPRSP07814 1512 aaKnown RBP19.9■□□□□ 0.78
LITAF-219ENST00000576334 PPRC1Q5VV67 1664 aaKnown RBP19.9■□□□□ 0.78
LITAF-219ENST00000576334 GLI2P10070 1586 aa19.88■□□□□ 0.77
LITAF-219ENST00000576334 SAMD9Q5K651 1589 aa19.88■□□□□ 0.77
LITAF-219ENST00000576334 KDM6BO15054 1643 aa19.87■□□□□ 0.77
LITAF-219ENST00000576334 KIF21BO75037 1637 aa19.84■□□□□ 0.77
LITAF-219ENST00000576334 WDR7Q9Y4E6 1490 aa19.84■□□□□ 0.77
LITAF-219ENST00000576334 MAP3K4Q9Y6R4 1608 aa19.83■□□□□ 0.76
LITAF-219ENST00000576334 KCNH8Q96L42 1107 aa19.82■□□□□ 0.76
LITAF-219ENST00000576334 FHOD3Q2V2M9 1422 aa19.81■□□□□ 0.76
LITAF-219ENST00000576334 ATP10BO94823 1461 aa19.79■□□□□ 0.76
LITAF-219ENST00000576334 COL17A1Q9UMD9 1497 aaPredicted RBP19.78■□□□□ 0.76
LITAF-219ENST00000576334 AEBP2Q6ZN18 517 aaPredicted RBP19.77■□□□□ 0.76
LITAF-219ENST00000576334 RAPGEF6Q8TEU7 1601 aa19.76■□□□□ 0.75
LITAF-219ENST00000576334 UBTFP17480 764 aaKnown RBP19.74■□□□□ 0.75
LITAF-219ENST00000576334 NUP153P49790 1475 aaKnown RBP19.71■□□□□ 0.75
LITAF-219ENST00000576334 CD109Q6YHK3 1445 aa19.7■□□□□ 0.74
LITAF-219ENST00000576334 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.69■□□□□ 0.74
LITAF-219ENST00000576334 HNRNPUL2Q1KMD3 747 aaKnown RBP19.69■□□□□ 0.74
LITAF-219ENST00000576334 CFAP43Q8NDM7 1665 aa19.68■□□□□ 0.74
LITAF-219ENST00000576334 TEX14Q8IWB6 1497 aa19.67■□□□□ 0.74
LITAF-219ENST00000576334 EFCAB5A4FU69 1503 aa19.66■□□□□ 0.74
LITAF-219ENST00000576334 KDM4FA0A1W2PPD8 638 aa19.64■□□□□ 0.73
LITAF-219ENST00000576334 MAGI3Q5TCQ9 1506 aa19.64■□□□□ 0.73
LITAF-219ENST00000576334 ARHGAP35Q9NRY4 1499 aa19.62■□□□□ 0.73
LITAF-219ENST00000576334 ABCA9Q8IUA7 1624 aa19.6■□□□□ 0.73
LITAF-219ENST00000576334 CDK13Q14004 1512 aaKnown RBP19.59■□□□□ 0.73
LITAF-219ENST00000576334 ATP1B4Q9UN42 357 aaPredicted RBP19.56■□□□□ 0.72
LITAF-219ENST00000576334 PLEKHD1A6NEE1 506 aa19.53■□□□□ 0.72
LITAF-219ENST00000576334 ADGRL1O94910 1474 aa19.49■□□□□ 0.71
LITAF-219ENST00000576334 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.49■□□□□ 0.71
LITAF-219ENST00000576334 FMN1Q68DA7 1419 aa19.49■□□□□ 0.71
LITAF-219ENST00000576334 LRRIQ1Q96JM4 1722 aa19.48■□□□□ 0.71
LITAF-219ENST00000576334 ARAP3Q8WWN8 1544 aa19.48■□□□□ 0.71
LITAF-219ENST00000576334 TTC37Q6PGP7 1564 aa19.48■□□□□ 0.71
LITAF-219ENST00000576334 RAPGEF3O95398 923 aa19.47■□□□□ 0.71
LITAF-219ENST00000576334 HECW1Q76N89 1606 aa19.47■□□□□ 0.71
LITAF-219ENST00000576334 NEO1Q92859 1461 aa19.43■□□□□ 0.7
LITAF-219ENST00000576334 FRMPD1Q5SYB0 1578 aa19.42■□□□□ 0.7
LITAF-219ENST00000576334 PCF11O94913 1555 aaKnown RBP19.41■□□□□ 0.7
LITAF-219ENST00000576334 KIF14Q15058 1648 aa19.4■□□□□ 0.7
LITAF-219ENST00000576334 FANCAO15360 1455 aa19.39■□□□□ 0.69
LITAF-219ENST00000576334 PHLDB1Q86UU1 1377 aa19.38■□□□□ 0.69
LITAF-219ENST00000576334 CLIP1P30622 1438 aa19.37■□□□□ 0.69
LITAF-219ENST00000576334 AKNAQ7Z591 1439 aa19.37■□□□□ 0.69
LITAF-219ENST00000576334 CASKIN1Q8WXD9 1431 aa19.34■□□□□ 0.69
LITAF-219ENST00000576334 RICTORQ6R327 1708 aa19.34■□□□□ 0.69
LITAF-219ENST00000576334 PLCH2O75038 1416 aa19.33■□□□□ 0.68
LITAF-219ENST00000576334 TROQ12816 1431 aaPredicted RBP19.33■□□□□ 0.68
LITAF-219ENST00000576334 CDK11AQ9UQ88 783 aaPredicted RBP19.32■□□□□ 0.68
LITAF-219ENST00000576334 DENND4BO75064 1496 aaPredicted RBP19.32■□□□□ 0.68
LITAF-219ENST00000576334 CFAP74Q9C0B2 1584 aa19.31■□□□□ 0.68
LITAF-219ENST00000576334 MYO5CQ9NQX4 1742 aa19.31■□□□□ 0.68
LITAF-219ENST00000576334 SCAPERQ9BY12 1400 aa19.27■□□□□ 0.68
LITAF-219ENST00000576334 FYCO1Q9BQS8 1478 aa19.27■□□□□ 0.67
LITAF-219ENST00000576334 LOC105371045A0A1W2PR82 267 aa19.26■□□□□ 0.67
LITAF-219ENST00000576334 YEATS2Q9ULM3 1422 aa19.25■□□□□ 0.67
LITAF-219ENST00000576334 SIGLEC1Q9BZZ2 1709 aa19.25■□□□□ 0.67
LITAF-219ENST00000576334 CCDC18Q5T9S5 1454 aa19.25■□□□□ 0.67
LITAF-219ENST00000576334 EFCAB2Q5VUJ9 269 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms