RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 KIF13AQ9H1H9 1805 aa17.89■□□□□ 0.45
CALCOCO2-227ENST00000575560 FAM69CQ0P6D2 419 aa17.85■□□□□ 0.45
CALCOCO2-227ENST00000575560 ABCC10Q5T3U5 1492 aa17.84■□□□□ 0.45
CALCOCO2-227ENST00000575560 NPM1P06748 294 aaKnown RBP eCLIP17.84■□□□□ 0.45
CALCOCO2-227ENST00000575560 RUSC2Q8N2Y8 1516 aa17.81■□□□□ 0.44
CALCOCO2-227ENST00000575560 MAPKBP1O60336 1514 aa17.79■□□□□ 0.44
CALCOCO2-227ENST00000575560 IGF1RP08069 1367 aa17.77■□□□□ 0.43
CALCOCO2-227ENST00000575560 KIAA0586Q9BVV6 1533 aa17.76■□□□□ 0.43
CALCOCO2-227ENST00000575560 ADCY10Q96PN6 1610 aa17.75■□□□□ 0.43
CALCOCO2-227ENST00000575560 DIP2BQ9P265 1576 aa17.74■□□□□ 0.43
CALCOCO2-227ENST00000575560 KDM4FA0A1W2PPD8 638 aa17.7■□□□□ 0.42
CALCOCO2-227ENST00000575560 KIF27Q86VH2 1401 aa17.68■□□□□ 0.42
CALCOCO2-227ENST00000575560 PTPRGP23470 1445 aa17.65■□□□□ 0.42
CALCOCO2-227ENST00000575560 KDM6BO15054 1643 aa17.64■□□□□ 0.41
CALCOCO2-227ENST00000575560 CUL7Q14999 1698 aa17.63■□□□□ 0.41
CALCOCO2-227ENST00000575560 CARMIL1Q5VZK9 1371 aa17.61■□□□□ 0.41
CALCOCO2-227ENST00000575560 TNIKQ9UKE5 1360 aa17.59■□□□□ 0.41
CALCOCO2-227ENST00000575560 TSPOAP1O95153 1857 aa17.58■□□□□ 0.4
CALCOCO2-227ENST00000575560 ABCC2Q92887 1545 aa17.57■□□□□ 0.4
CALCOCO2-227ENST00000575560 TTBK1Q5TCY1 1321 aaPredicted RBP17.57■□□□□ 0.4
CALCOCO2-227ENST00000575560 CARMIL2Q6F5E8 1435 aa17.56■□□□□ 0.4
CALCOCO2-227ENST00000575560 ASXL2Q76L83 1435 aa17.55■□□□□ 0.4
CALCOCO2-227ENST00000575560 PLB1Q6P1J6 1458 aa17.54■□□□□ 0.4
CALCOCO2-227ENST00000575560 UHRF1BP1LA0JNW5 1464 aa17.53■□□□□ 0.4
CALCOCO2-227ENST00000575560 GLI2P10070 1586 aa17.52■□□□□ 0.39
CALCOCO2-227ENST00000575560 UACAQ9BZF9 1416 aa17.49■□□□□ 0.39
CALCOCO2-227ENST00000575560 IQGAP2Q13576 1575 aa17.49■□□□□ 0.39
CALCOCO2-227ENST00000575560 DISP1Q96F81 1524 aa17.48■□□□□ 0.39
CALCOCO2-227ENST00000575560 PPRC1Q5VV67 1664 aaKnown RBP17.48■□□□□ 0.39
CALCOCO2-227ENST00000575560 COL17A1Q9UMD9 1497 aaPredicted RBP17.46■□□□□ 0.39
CALCOCO2-227ENST00000575560 KDM5BQ9UGL1 1544 aa17.45■□□□□ 0.38
CALCOCO2-227ENST00000575560 EPRSP07814 1512 aaKnown RBP17.43■□□□□ 0.38
CALCOCO2-227ENST00000575560 ILDR1Q86SU0 546 aaPredicted RBP17.41■□□□□ 0.38
CALCOCO2-227ENST00000575560 ADGRL1O94910 1474 aa17.41■□□□□ 0.38
CALCOCO2-227ENST00000575560 UGGT2Q9NYU1 1516 aa17.41■□□□□ 0.38
CALCOCO2-227ENST00000575560 RAPGEF2Q9Y4G8 1499 aa17.39■□□□□ 0.37
CALCOCO2-227ENST00000575560 MAP3K4Q9Y6R4 1608 aa17.39■□□□□ 0.37
CALCOCO2-227ENST00000575560 TEX14Q8IWB6 1497 aa17.37■□□□□ 0.37
CALCOCO2-227ENST00000575560 ZCCHC11Q5TAX3 1644 aaKnown RBP17.35■□□□□ 0.37
CALCOCO2-227ENST00000575560 KIAA0556O60303 1618 aa17.33■□□□□ 0.37
CALCOCO2-227ENST00000575560 WDR7Q9Y4E6 1490 aa17.31■□□□□ 0.36
CALCOCO2-227ENST00000575560 CD109Q6YHK3 1445 aa17.26■□□□□ 0.35
CALCOCO2-227ENST00000575560 MAGI3Q5TCQ9 1506 aa17.26■□□□□ 0.35
CALCOCO2-227ENST00000575560 KCNH8Q96L42 1107 aa17.25■□□□□ 0.35
CALCOCO2-227ENST00000575560 HECW2Q9P2P5 1572 aa17.23■□□□□ 0.35
CALCOCO2-227ENST00000575560 GOLGA3Q08378 1498 aa17.23■□□□□ 0.35
CALCOCO2-227ENST00000575560 ABCA8O94911 1581 aa17.22■□□□□ 0.35
CALCOCO2-227ENST00000575560 CFAP43Q8NDM7 1665 aa17.2■□□□□ 0.34
CALCOCO2-227ENST00000575560 CTTNBP2Q8WZ74 1663 aa17.17■□□□□ 0.34
CALCOCO2-227ENST00000575560 PRXQ9BXM0 1461 aa17.17■□□□□ 0.34
CALCOCO2-227ENST00000575560 ARAP3Q8WWN8 1544 aa17.14■□□□□ 0.33
CALCOCO2-227ENST00000575560 ATP10BO94823 1461 aa17.12■□□□□ 0.33
CALCOCO2-227ENST00000575560 FAM9AQ8IZU1 332 aaPredicted RBP17.1■□□□□ 0.33
CALCOCO2-227ENST00000575560 ARID3CA6NKF2 412 aa17.09■□□□□ 0.33
CALCOCO2-227ENST00000575560 P3H3Q8IVL6 736 aa17.09■□□□□ 0.33
CALCOCO2-227ENST00000575560 PHLDB1Q86UU1 1377 aa17.09■□□□□ 0.33
CALCOCO2-227ENST00000575560 KIF21BO75037 1637 aa17.07■□□□□ 0.32
CALCOCO2-227ENST00000575560 PHF23Q9BUL5 403 aaPredicted RBP17.07■□□□□ 0.32
CALCOCO2-227ENST00000575560 RAPGEF3O95398 923 aa17.05■□□□□ 0.32
CALCOCO2-227ENST00000575560 ABCA9Q8IUA7 1624 aa17.03■□□□□ 0.32
CALCOCO2-227ENST00000575560 PTPRMP28827 1452 aa17.02■□□□□ 0.32
CALCOCO2-227ENST00000575560 FBXO41Q8TF61 875 aa17.01■□□□□ 0.31
CALCOCO2-227ENST00000575560 ADAMTSL3P82987 1691 aa17.01■□□□□ 0.31
CALCOCO2-227ENST00000575560 NEO1Q92859 1461 aa17■□□□□ 0.31
CALCOCO2-227ENST00000575560 CSRNP3Q8WYN3 585 aa16.99■□□□□ 0.31
CALCOCO2-227ENST00000575560 SAMD9Q5K651 1589 aa16.98■□□□□ 0.31
CALCOCO2-227ENST00000575560 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.96■□□□□ 0.31
CALCOCO2-227ENST00000575560 HNRNPUL2Q1KMD3 747 aaKnown RBP16.96■□□□□ 0.31
CALCOCO2-227ENST00000575560 RAPGEF6Q8TEU7 1601 aa16.95■□□□□ 0.3
CALCOCO2-227ENST00000575560 FRMPD1Q5SYB0 1578 aa16.94■□□□□ 0.3
CALCOCO2-227ENST00000575560 NUP153P49790 1475 aaKnown RBP16.93■□□□□ 0.3
CALCOCO2-227ENST00000575560 ARID4BQ4LE39 1312 aaPredicted RBP16.93■□□□□ 0.3
CALCOCO2-227ENST00000575560 BCORL1Q5H9F3 1711 aa16.92■□□□□ 0.3
CALCOCO2-227ENST00000575560 PLEKHD1A6NEE1 506 aa16.9■□□□□ 0.3
CALCOCO2-227ENST00000575560 MADDQ8WXG6 1647 aa16.88■□□□□ 0.29
CALCOCO2-227ENST00000575560 DENND4BO75064 1496 aaPredicted RBP16.88■□□□□ 0.29
CALCOCO2-227ENST00000575560 LMTK3Q96Q04 1460 aa16.88■□□□□ 0.29
CALCOCO2-227ENST00000575560 PCF11O94913 1555 aaKnown RBP16.88■□□□□ 0.29
CALCOCO2-227ENST00000575560 FHOD3Q2V2M9 1422 aa16.87■□□□□ 0.29
CALCOCO2-227ENST00000575560 AKNAQ7Z591 1439 aa16.87■□□□□ 0.29
CALCOCO2-227ENST00000575560 RANGAP1P46060 587 aaPredicted RBP16.85■□□□□ 0.29
CALCOCO2-227ENST00000575560 SENP3Q9H4L4 574 aaPredicted RBP16.84■□□□□ 0.29
CALCOCO2-227ENST00000575560 FANCAO15360 1455 aa16.84■□□□□ 0.29
CALCOCO2-227ENST00000575560 ARHGEF40Q8TER5 1519 aa16.84■□□□□ 0.29
CALCOCO2-227ENST00000575560 RICTORQ6R327 1708 aa16.83■□□□□ 0.28
CALCOCO2-227ENST00000575560 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.82■□□□□ 0.28
CALCOCO2-227ENST00000575560 EEA1Q15075 1411 aa16.81■□□□□ 0.28
CALCOCO2-227ENST00000575560 HSPA2P54652 639 aa16.8■□□□□ 0.28
CALCOCO2-227ENST00000575560 POGZQ7Z3K3 1410 aa16.79■□□□□ 0.28
CALCOCO2-227ENST00000575560 YEATS2Q9ULM3 1422 aa16.79■□□□□ 0.28
CALCOCO2-227ENST00000575560 RIMS1Q86UR5 1692 aaKnown RBP16.79■□□□□ 0.28
CALCOCO2-227ENST00000575560 ZMYM4Q5VZL5 1548 aa16.79■□□□□ 0.28
CALCOCO2-227ENST00000575560 MAGI2Q86UL8 1455 aa16.79■□□□□ 0.28
CALCOCO2-227ENST00000575560 CFAP74Q9C0B2 1584 aa16.78■□□□□ 0.28
CALCOCO2-227ENST00000575560 TTC37Q6PGP7 1564 aa16.77■□□□□ 0.27
CALCOCO2-227ENST00000575560 ZFYVE16Q7Z3T8 1539 aa16.75■□□□□ 0.27
CALCOCO2-227ENST00000575560 PLCH2O75038 1416 aa16.75■□□□□ 0.27
CALCOCO2-227ENST00000575560 SIGLEC1Q9BZZ2 1709 aa16.75■□□□□ 0.27
CALCOCO2-227ENST00000575560 EFCAB5A4FU69 1503 aa16.75■□□□□ 0.27
CALCOCO2-227ENST00000575560 SCAPERQ9BY12 1400 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms