RNA–Protein interactions for RNA: ENST00000575396.1

LCMT1-210, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 3

Gene LCMT1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-210ENST00000575396 KIF21BO75037 1637 aa23.87■■□□□ 1.41
LCMT1-210ENST00000575396 SHROOM2Q13796 1616 aa23.84■■□□□ 1.41
LCMT1-210ENST00000575396 ARHGEF11O15085 1522 aa23.83■■□□□ 1.41
LCMT1-210ENST00000575396 IQGAP2Q13576 1575 aa23.8■■□□□ 1.4
LCMT1-210ENST00000575396 RIMBP3CA6NJZ7 1639 aa23.78■■□□□ 1.4
LCMT1-210ENST00000575396 RIMBP3BA6NNM3 1639 aa23.78■■□□□ 1.4
LCMT1-210ENST00000575396 RIMBP3Q9UFD9 1639 aa23.78■■□□□ 1.4
LCMT1-210ENST00000575396 CTTNBP2Q8WZ74 1663 aa23.76■■□□□ 1.39
LCMT1-210ENST00000575396 PRG4Q92954 1404 aaPredicted RBP23.76■■□□□ 1.39
LCMT1-210ENST00000575396 GOLGA3Q08378 1498 aa23.75■■□□□ 1.39
LCMT1-210ENST00000575396 UGGT2Q9NYU1 1516 aa23.7■■□□□ 1.38
LCMT1-210ENST00000575396 CARMIL2Q6F5E8 1435 aa23.7■■□□□ 1.38
LCMT1-210ENST00000575396 UBTFP17480 764 aaKnown RBP23.68■■□□□ 1.38
LCMT1-210ENST00000575396 ERCC6L2Q5T890 1561 aa23.64■■□□□ 1.37
LCMT1-210ENST00000575396 ARAP1Q96P48 1450 aa23.63■■□□□ 1.37
LCMT1-210ENST00000575396 CYB5RLQ6IPT4 315 aa23.62■■□□□ 1.37
LCMT1-210ENST00000575396 DISP1Q96F81 1524 aa23.61■■□□□ 1.37
LCMT1-210ENST00000575396 TNIKQ9UKE5 1360 aa23.58■■□□□ 1.37
LCMT1-210ENST00000575396 EHMT2Q96KQ7 1210 aa23.55■■□□□ 1.36
LCMT1-210ENST00000575396 KIAA0556O60303 1618 aa23.55■■□□□ 1.36
LCMT1-210ENST00000575396 PTPRGP23470 1445 aa23.53■■□□□ 1.36
LCMT1-210ENST00000575396 SAMD9Q5K651 1589 aa23.49■■□□□ 1.35
LCMT1-210ENST00000575396 EFCAB5A4FU69 1503 aa23.49■■□□□ 1.35
LCMT1-210ENST00000575396 RANGAP1P46060 587 aaPredicted RBP23.42■■□□□ 1.34
LCMT1-210ENST00000575396 LOC105371045A0A1W2PR82 267 aa23.4■■□□□ 1.34
LCMT1-210ENST00000575396 P3H3Q8IVL6 736 aa23.4■■□□□ 1.34
LCMT1-210ENST00000575396 UACAQ9BZF9 1416 aa23.38■■□□□ 1.33
LCMT1-210ENST00000575396 UHRF1BP1LA0JNW5 1464 aa23.36■■□□□ 1.33
LCMT1-210ENST00000575396 TTBK1Q5TCY1 1321 aaPredicted RBP23.36■■□□□ 1.33
LCMT1-210ENST00000575396 ARHGAP35Q9NRY4 1499 aa23.36■■□□□ 1.33
LCMT1-210ENST00000575396 NPM1P06748 294 aaKnown RBP eCLIP23.33■■□□□ 1.33
LCMT1-210ENST00000575396 CLIP1P30622 1438 aa23.33■■□□□ 1.32
LCMT1-210ENST00000575396 FHOD3Q2V2M9 1422 aa23.33■■□□□ 1.32
LCMT1-210ENST00000575396 ADCY10Q96PN6 1610 aa23.31■■□□□ 1.32
LCMT1-210ENST00000575396 ABCC2Q92887 1545 aa23.31■■□□□ 1.32
LCMT1-210ENST00000575396 ABCA8O94911 1581 aa23.29■■□□□ 1.32
LCMT1-210ENST00000575396 FMN1Q68DA7 1419 aa23.29■■□□□ 1.32
LCMT1-210ENST00000575396 PLB1Q6P1J6 1458 aa23.28■■□□□ 1.32
LCMT1-210ENST00000575396 CEP162Q5TB80 1403 aa23.27■■□□□ 1.32
LCMT1-210ENST00000575396 KDM5BQ9UGL1 1544 aa23.23■■□□□ 1.31
LCMT1-210ENST00000575396 RAPGEF6Q8TEU7 1601 aa23.21■■□□□ 1.31
LCMT1-210ENST00000575396 MAPKBP1O60336 1514 aa23.18■■□□□ 1.3
LCMT1-210ENST00000575396 NUP153P49790 1475 aaKnown RBP23.12■■□□□ 1.29
LCMT1-210ENST00000575396 ZCCHC11Q5TAX3 1644 aaKnown RBP23.12■■□□□ 1.29
LCMT1-210ENST00000575396 ATP10BO94823 1461 aa23.11■■□□□ 1.29
LCMT1-210ENST00000575396 CASKIN1Q8WXD9 1431 aa23.11■■□□□ 1.29
LCMT1-210ENST00000575396 ASXL2Q76L83 1435 aa23.08■■□□□ 1.29
LCMT1-210ENST00000575396 HECW1Q76N89 1606 aa23.08■■□□□ 1.29
LCMT1-210ENST00000575396 FYCO1Q9BQS8 1478 aa23.06■■□□□ 1.28
LCMT1-210ENST00000575396 TRHP20396 242 aaPredicted RBP23.05■■□□□ 1.28
LCMT1-210ENST00000575396 ATP1B4Q9UN42 357 aaPredicted RBP23.04■■□□□ 1.28
LCMT1-210ENST00000575396 ABCC10Q5T3U5 1492 aa23.04■■□□□ 1.28
LCMT1-210ENST00000575396 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.03■■□□□ 1.28
LCMT1-210ENST00000575396 HNRNPUL2Q1KMD3 747 aaKnown RBP23.03■■□□□ 1.28
LCMT1-210ENST00000575396 EPRSP07814 1512 aaKnown RBP23.03■■□□□ 1.28
LCMT1-210ENST00000575396 CDK11AQ9UQ88 783 aaPredicted RBP23.02■■□□□ 1.28
LCMT1-210ENST00000575396 WDR7Q9Y4E6 1490 aa23.02■■□□□ 1.28
LCMT1-210ENST00000575396 PLEKHD1A6NEE1 506 aa23.01■■□□□ 1.27
LCMT1-210ENST00000575396 PCF11O94913 1555 aaKnown RBP23.01■■□□□ 1.27
LCMT1-210ENST00000575396 VPS8Q8N3P4 1428 aa23■■□□□ 1.27
LCMT1-210ENST00000575396 CCDC18Q5T9S5 1454 aa23■■□□□ 1.27
LCMT1-210ENST00000575396 ARID3CA6NKF2 412 aa23■■□□□ 1.27
LCMT1-210ENST00000575396 FAM69CQ0P6D2 419 aa22.97■■□□□ 1.27
LCMT1-210ENST00000575396 DIP2BQ9P265 1576 aa22.96■■□□□ 1.27
LCMT1-210ENST00000575396 GLI2P10070 1586 aa22.95■■□□□ 1.26
LCMT1-210ENST00000575396 CDK13Q14004 1512 aaKnown RBP22.94■■□□□ 1.26
LCMT1-210ENST00000575396 KIF13AQ9H1H9 1805 aa22.93■■□□□ 1.26
LCMT1-210ENST00000575396 KCNH8Q96L42 1107 aa22.91■■□□□ 1.26
LCMT1-210ENST00000575396 LRRIQ1Q96JM4 1722 aa22.91■■□□□ 1.26
LCMT1-210ENST00000575396 TROQ12816 1431 aaPredicted RBP22.85■■□□□ 1.25
LCMT1-210ENST00000575396 MAP3K1Q13233 1512 aa22.83■■□□□ 1.25
LCMT1-210ENST00000575396 CFAP43Q8NDM7 1665 aa22.82■■□□□ 1.24
LCMT1-210ENST00000575396 ABCA9Q8IUA7 1624 aa22.81■■□□□ 1.24
LCMT1-210ENST00000575396 MAP3K4Q9Y6R4 1608 aa22.81■■□□□ 1.24
LCMT1-210ENST00000575396 APLP2Q06481 763 aa22.8■■□□□ 1.24
LCMT1-210ENST00000575396 CD109Q6YHK3 1445 aa22.8■■□□□ 1.24
LCMT1-210ENST00000575396 MTUS2Q5JR59 1369 aa22.77■■□□□ 1.24
LCMT1-210ENST00000575396 TIAM1Q13009 1591 aa22.76■■□□□ 1.23
LCMT1-210ENST00000575396 MAGI3Q5TCQ9 1506 aa22.76■■□□□ 1.23
LCMT1-210ENST00000575396 KIF14Q15058 1648 aa22.75■■□□□ 1.23
LCMT1-210ENST00000575396 TEX14Q8IWB6 1497 aa22.74■■□□□ 1.23
LCMT1-210ENST00000575396 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.74■■□□□ 1.23
LCMT1-210ENST00000575396 EHBP1L1Q8N3D4 1523 aa22.72■■□□□ 1.23
LCMT1-210ENST00000575396 TSPOAP1O95153 1857 aa22.71■■□□□ 1.23
LCMT1-210ENST00000575396 PHLDB1Q86UU1 1377 aa22.7■■□□□ 1.22
LCMT1-210ENST00000575396 LRRC9Q6ZRR7 1453 aa22.69■■□□□ 1.22
LCMT1-210ENST00000575396 PPRC1Q5VV67 1664 aaKnown RBP22.68■■□□□ 1.22
LCMT1-210ENST00000575396 TTC37Q6PGP7 1564 aa22.67■■□□□ 1.22
LCMT1-210ENST00000575396 PLCH2O75038 1416 aa22.67■■□□□ 1.22
LCMT1-210ENST00000575396 ARAP3Q8WWN8 1544 aa22.67■■□□□ 1.22
LCMT1-210ENST00000575396 NEO1Q92859 1461 aa22.64■■□□□ 1.21
LCMT1-210ENST00000575396 KANK4Q5T7N3 995 aaPredicted RBP22.62■■□□□ 1.21
LCMT1-210ENST00000575396 EFCAB2Q5VUJ9 269 aa22.62■■□□□ 1.21
LCMT1-210ENST00000575396 MYO5CQ9NQX4 1742 aa22.62■■□□□ 1.21
LCMT1-210ENST00000575396 SUPT6HQ7KZ85 1726 aaKnown RBP22.61■■□□□ 1.21
LCMT1-210ENST00000575396 CCNB3Q8WWL7 1395 aa22.6■■□□□ 1.21
LCMT1-210ENST00000575396 CFAP74Q9C0B2 1584 aa22.59■■□□□ 1.21
LCMT1-210ENST00000575396 FANCAO15360 1455 aa22.59■■□□□ 1.21
LCMT1-210ENST00000575396 GPATCH8Q9UKJ3 1502 aaKnown RBP22.57■■□□□ 1.2
LCMT1-210ENST00000575396 NCOA2Q15596 1464 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms