RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 RIMBP3CA6NJZ7 1639 aa26.89■■□□□ 1.9
PFN1-203ENST00000574872 RIMBP3BA6NNM3 1639 aa26.89■■□□□ 1.9
PFN1-203ENST00000574872 RIMBP3Q9UFD9 1639 aa26.89■■□□□ 1.9
PFN1-203ENST00000574872 EHMT2Q96KQ7 1210 aa26.86■■□□□ 1.89
PFN1-203ENST00000574872 SHROOM2Q13796 1616 aa26.84■■□□□ 1.89
PFN1-203ENST00000574872 JPH4Q96JJ6 628 aa26.84■■□□□ 1.89
PFN1-203ENST00000574872 KIF21BO75037 1637 aa26.83■■□□□ 1.88
PFN1-203ENST00000574872 IQGAP2Q13576 1575 aa26.8■■□□□ 1.88
PFN1-203ENST00000574872 ERCC6L2Q5T890 1561 aa26.8■■□□□ 1.88
PFN1-203ENST00000574872 PRG4Q92954 1404 aaPredicted RBP26.79■■□□□ 1.88
PFN1-203ENST00000574872 CTTNBP2Q8WZ74 1663 aa26.77■■□□□ 1.88
PFN1-203ENST00000574872 ARAP1Q96P48 1450 aa26.74■■□□□ 1.87
PFN1-203ENST00000574872 GOLGA3Q08378 1498 aa26.72■■□□□ 1.87
PFN1-203ENST00000574872 CYB5RLQ6IPT4 315 aa26.69■■□□□ 1.86
PFN1-203ENST00000574872 UBTFP17480 764 aaKnown RBP26.67■■□□□ 1.86
PFN1-203ENST00000574872 UGGT2Q9NYU1 1516 aa26.65■■□□□ 1.86
PFN1-203ENST00000574872 RANGAP1P46060 587 aaPredicted RBP26.61■■□□□ 1.85
PFN1-203ENST00000574872 CARMIL2Q6F5E8 1435 aa26.61■■□□□ 1.85
PFN1-203ENST00000574872 DISP1Q96F81 1524 aa26.6■■□□□ 1.85
PFN1-203ENST00000574872 TTBK1Q5TCY1 1321 aaPredicted RBP26.58■■□□□ 1.85
PFN1-203ENST00000574872 KIAA0556O60303 1618 aa26.55■■□□□ 1.84
PFN1-203ENST00000574872 TNIKQ9UKE5 1360 aa26.52■■□□□ 1.84
PFN1-203ENST00000574872 P3H3Q8IVL6 736 aa26.5■■□□□ 1.83
PFN1-203ENST00000574872 PTPRGP23470 1445 aa26.49■■□□□ 1.83
PFN1-203ENST00000574872 SAMD9Q5K651 1589 aa26.45■■□□□ 1.82
PFN1-203ENST00000574872 LOC105371045A0A1W2PR82 267 aa26.43■■□□□ 1.82
PFN1-203ENST00000574872 FHOD3Q2V2M9 1422 aa26.39■■□□□ 1.81
PFN1-203ENST00000574872 EFCAB5A4FU69 1503 aa26.37■■□□□ 1.81
PFN1-203ENST00000574872 ADCY10Q96PN6 1610 aa26.33■■□□□ 1.81
PFN1-203ENST00000574872 ARHGAP35Q9NRY4 1499 aa26.32■■□□□ 1.8
PFN1-203ENST00000574872 UACAQ9BZF9 1416 aa26.31■■□□□ 1.8
PFN1-203ENST00000574872 PLB1Q6P1J6 1458 aa26.3■■□□□ 1.8
PFN1-203ENST00000574872 CLIP1P30622 1438 aa26.27■■□□□ 1.8
PFN1-203ENST00000574872 ABCC2Q92887 1545 aa26.26■■□□□ 1.79
PFN1-203ENST00000574872 ABCA8O94911 1581 aa26.24■■□□□ 1.79
PFN1-203ENST00000574872 UHRF1BP1LA0JNW5 1464 aa26.23■■□□□ 1.79
PFN1-203ENST00000574872 NPM1P06748 294 aaKnown RBP eCLIP26.22■■□□□ 1.79
PFN1-203ENST00000574872 CEP162Q5TB80 1403 aa26.22■■□□□ 1.79
PFN1-203ENST00000574872 ARID3CA6NKF2 412 aa26.17■■□□□ 1.78
PFN1-203ENST00000574872 RAPGEF6Q8TEU7 1601 aa26.16■■□□□ 1.78
PFN1-203ENST00000574872 FMN1Q68DA7 1419 aa26.14■■□□□ 1.77
PFN1-203ENST00000574872 KDM5BQ9UGL1 1544 aa26.13■■□□□ 1.77
PFN1-203ENST00000574872 ZCCHC11Q5TAX3 1644 aaKnown RBP26.1■■□□□ 1.77
PFN1-203ENST00000574872 TRHP20396 242 aaPredicted RBP26.08■■□□□ 1.77
PFN1-203ENST00000574872 NUP153P49790 1475 aaKnown RBP26.08■■□□□ 1.77
PFN1-203ENST00000574872 MAPKBP1O60336 1514 aa26.08■■□□□ 1.77
PFN1-203ENST00000574872 ATP1B4Q9UN42 357 aaPredicted RBP26.07■■□□□ 1.76
PFN1-203ENST00000574872 ASXL2Q76L83 1435 aa26.04■■□□□ 1.76
PFN1-203ENST00000574872 ATP10BO94823 1461 aa26.04■■□□□ 1.76
PFN1-203ENST00000574872 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.02■■□□□ 1.76
PFN1-203ENST00000574872 HNRNPUL2Q1KMD3 747 aaKnown RBP26.02■■□□□ 1.76
PFN1-203ENST00000574872 PCF11O94913 1555 aaKnown RBP26.01■■□□□ 1.75
PFN1-203ENST00000574872 HECW1Q76N89 1606 aa25.99■■□□□ 1.75
PFN1-203ENST00000574872 CASKIN1Q8WXD9 1431 aa25.97■■□□□ 1.75
PFN1-203ENST00000574872 CDK13Q14004 1512 aaKnown RBP25.96■■□□□ 1.75
PFN1-203ENST00000574872 ABCC10Q5T3U5 1492 aa25.94■■□□□ 1.74
PFN1-203ENST00000574872 EPRSP07814 1512 aaKnown RBP25.93■■□□□ 1.74
PFN1-203ENST00000574872 WDR7Q9Y4E6 1490 aa25.93■■□□□ 1.74
PFN1-203ENST00000574872 FYCO1Q9BQS8 1478 aa25.92■■□□□ 1.74
PFN1-203ENST00000574872 FAM69CQ0P6D2 419 aa25.92■■□□□ 1.74
PFN1-203ENST00000574872 DIP2BQ9P265 1576 aa25.91■■□□□ 1.74
PFN1-203ENST00000574872 LRRIQ1Q96JM4 1722 aa25.88■■□□□ 1.73
PFN1-203ENST00000574872 KIF13AQ9H1H9 1805 aa25.88■■□□□ 1.73
PFN1-203ENST00000574872 KCNH8Q96L42 1107 aa25.88■■□□□ 1.73
PFN1-203ENST00000574872 VPS8Q8N3P4 1428 aa25.86■■□□□ 1.73
PFN1-203ENST00000574872 PLEKHD1A6NEE1 506 aa25.83■■□□□ 1.73
PFN1-203ENST00000574872 CCDC18Q5T9S5 1454 aa25.83■■□□□ 1.73
PFN1-203ENST00000574872 GLI2P10070 1586 aa25.79■■□□□ 1.72
PFN1-203ENST00000574872 CDK11AQ9UQ88 783 aaPredicted RBP25.77■■□□□ 1.72
PFN1-203ENST00000574872 TSPOAP1O95153 1857 aa25.72■■□□□ 1.71
PFN1-203ENST00000574872 TROQ12816 1431 aaPredicted RBP25.71■■□□□ 1.71
PFN1-203ENST00000574872 MAGI3Q5TCQ9 1506 aa25.71■■□□□ 1.71
PFN1-203ENST00000574872 MAP3K4Q9Y6R4 1608 aa25.7■■□□□ 1.71
PFN1-203ENST00000574872 CD109Q6YHK3 1445 aa25.67■■□□□ 1.7
PFN1-203ENST00000574872 ABCA9Q8IUA7 1624 aa25.66■■□□□ 1.7
PFN1-203ENST00000574872 CFAP43Q8NDM7 1665 aa25.66■■□□□ 1.7
PFN1-203ENST00000574872 KIF14Q15058 1648 aa25.66■■□□□ 1.7
PFN1-203ENST00000574872 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.64■■□□□ 1.72e-7■■□□□ 12.7
PFN1-203ENST00000574872 TIAM1Q13009 1591 aa25.64■■□□□ 1.69
PFN1-203ENST00000574872 MTUS2Q5JR59 1369 aa25.63■■□□□ 1.69
PFN1-203ENST00000574872 TTC37Q6PGP7 1564 aa25.63■■□□□ 1.69
PFN1-203ENST00000574872 PPRC1Q5VV67 1664 aaKnown RBP25.63■■□□□ 1.69
PFN1-203ENST00000574872 APLP2Q06481 763 aa25.58■■□□□ 1.69
PFN1-203ENST00000574872 EHBP1L1Q8N3D4 1523 aa25.57■■□□□ 1.68
PFN1-203ENST00000574872 TEX14Q8IWB6 1497 aa25.56■■□□□ 1.68
PFN1-203ENST00000574872 MAP3K1Q13233 1512 aa25.53■■□□□ 1.68
PFN1-203ENST00000574872 KANK4Q5T7N3 995 aaPredicted RBP25.53■■□□□ 1.68
PFN1-203ENST00000574872 LRRC9Q6ZRR7 1453 aa25.53■■□□□ 1.68
PFN1-203ENST00000574872 PLCH2O75038 1416 aa25.48■■□□□ 1.67
PFN1-203ENST00000574872 MYO5CQ9NQX4 1742 aa25.48■■□□□ 1.67
PFN1-203ENST00000574872 FANCAO15360 1455 aa25.46■■□□□ 1.67
PFN1-203ENST00000574872 KDM6BO15054 1643 aa25.45■■□□□ 1.66
PFN1-203ENST00000574872 SUPT6HQ7KZ85 1726 aaKnown RBP25.44■■□□□ 1.66
PFN1-203ENST00000574872 ARHGAP5Q13017 1502 aa25.43■■□□□ 1.66
PFN1-203ENST00000574872 NCOA2Q15596 1464 aa25.43■■□□□ 1.66
PFN1-203ENST00000574872 CCNB3Q8WWL7 1395 aa25.43■■□□□ 1.66
PFN1-203ENST00000574872 NEO1Q92859 1461 aa25.42■■□□□ 1.66
PFN1-203ENST00000574872 CDC42BPAQ5VT25 1732 aa25.41■■□□□ 1.66
PFN1-203ENST00000574872 GPATCH8Q9UKJ3 1502 aaKnown RBP25.41■■□□□ 1.66
PFN1-203ENST00000574872 PREX2Q70Z35 1606 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms