RNA–Protein interactions for RNA: ENST00000574450.1

LCMT1-209, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 2

Gene LCMT1, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-209ENST00000574450 KIF21BO75037 1637 aa23.87■■□□□ 1.41
LCMT1-209ENST00000574450 SHROOM2Q13796 1616 aa23.84■■□□□ 1.41
LCMT1-209ENST00000574450 ARHGEF11O15085 1522 aa23.83■■□□□ 1.41
LCMT1-209ENST00000574450 IQGAP2Q13576 1575 aa23.8■■□□□ 1.4
LCMT1-209ENST00000574450 RIMBP3CA6NJZ7 1639 aa23.78■■□□□ 1.4
LCMT1-209ENST00000574450 RIMBP3BA6NNM3 1639 aa23.78■■□□□ 1.4
LCMT1-209ENST00000574450 RIMBP3Q9UFD9 1639 aa23.78■■□□□ 1.4
LCMT1-209ENST00000574450 CTTNBP2Q8WZ74 1663 aa23.76■■□□□ 1.39
LCMT1-209ENST00000574450 PRG4Q92954 1404 aaPredicted RBP23.76■■□□□ 1.39
LCMT1-209ENST00000574450 GOLGA3Q08378 1498 aa23.75■■□□□ 1.39
LCMT1-209ENST00000574450 UGGT2Q9NYU1 1516 aa23.7■■□□□ 1.38
LCMT1-209ENST00000574450 CARMIL2Q6F5E8 1435 aa23.7■■□□□ 1.38
LCMT1-209ENST00000574450 UBTFP17480 764 aaKnown RBP23.68■■□□□ 1.38
LCMT1-209ENST00000574450 ERCC6L2Q5T890 1561 aa23.64■■□□□ 1.37
LCMT1-209ENST00000574450 ARAP1Q96P48 1450 aa23.63■■□□□ 1.37
LCMT1-209ENST00000574450 CYB5RLQ6IPT4 315 aa23.62■■□□□ 1.37
LCMT1-209ENST00000574450 DISP1Q96F81 1524 aa23.61■■□□□ 1.37
LCMT1-209ENST00000574450 TNIKQ9UKE5 1360 aa23.58■■□□□ 1.37
LCMT1-209ENST00000574450 EHMT2Q96KQ7 1210 aa23.55■■□□□ 1.36
LCMT1-209ENST00000574450 KIAA0556O60303 1618 aa23.55■■□□□ 1.36
LCMT1-209ENST00000574450 PTPRGP23470 1445 aa23.53■■□□□ 1.36
LCMT1-209ENST00000574450 SAMD9Q5K651 1589 aa23.49■■□□□ 1.35
LCMT1-209ENST00000574450 EFCAB5A4FU69 1503 aa23.49■■□□□ 1.35
LCMT1-209ENST00000574450 RANGAP1P46060 587 aaPredicted RBP23.42■■□□□ 1.34
LCMT1-209ENST00000574450 LOC105371045A0A1W2PR82 267 aa23.4■■□□□ 1.34
LCMT1-209ENST00000574450 P3H3Q8IVL6 736 aa23.4■■□□□ 1.34
LCMT1-209ENST00000574450 UACAQ9BZF9 1416 aa23.38■■□□□ 1.33
LCMT1-209ENST00000574450 UHRF1BP1LA0JNW5 1464 aa23.36■■□□□ 1.33
LCMT1-209ENST00000574450 TTBK1Q5TCY1 1321 aaPredicted RBP23.36■■□□□ 1.33
LCMT1-209ENST00000574450 ARHGAP35Q9NRY4 1499 aa23.36■■□□□ 1.33
LCMT1-209ENST00000574450 NPM1P06748 294 aaKnown RBP eCLIP23.33■■□□□ 1.33
LCMT1-209ENST00000574450 CLIP1P30622 1438 aa23.33■■□□□ 1.32
LCMT1-209ENST00000574450 FHOD3Q2V2M9 1422 aa23.33■■□□□ 1.32
LCMT1-209ENST00000574450 ADCY10Q96PN6 1610 aa23.31■■□□□ 1.32
LCMT1-209ENST00000574450 ABCC2Q92887 1545 aa23.31■■□□□ 1.32
LCMT1-209ENST00000574450 ABCA8O94911 1581 aa23.29■■□□□ 1.32
LCMT1-209ENST00000574450 FMN1Q68DA7 1419 aa23.29■■□□□ 1.32
LCMT1-209ENST00000574450 PLB1Q6P1J6 1458 aa23.28■■□□□ 1.32
LCMT1-209ENST00000574450 CEP162Q5TB80 1403 aa23.27■■□□□ 1.32
LCMT1-209ENST00000574450 KDM5BQ9UGL1 1544 aa23.23■■□□□ 1.31
LCMT1-209ENST00000574450 RAPGEF6Q8TEU7 1601 aa23.21■■□□□ 1.31
LCMT1-209ENST00000574450 MAPKBP1O60336 1514 aa23.18■■□□□ 1.3
LCMT1-209ENST00000574450 NUP153P49790 1475 aaKnown RBP23.12■■□□□ 1.29
LCMT1-209ENST00000574450 ZCCHC11Q5TAX3 1644 aaKnown RBP23.12■■□□□ 1.29
LCMT1-209ENST00000574450 ATP10BO94823 1461 aa23.11■■□□□ 1.29
LCMT1-209ENST00000574450 CASKIN1Q8WXD9 1431 aa23.11■■□□□ 1.29
LCMT1-209ENST00000574450 ASXL2Q76L83 1435 aa23.08■■□□□ 1.29
LCMT1-209ENST00000574450 HECW1Q76N89 1606 aa23.08■■□□□ 1.29
LCMT1-209ENST00000574450 FYCO1Q9BQS8 1478 aa23.06■■□□□ 1.28
LCMT1-209ENST00000574450 TRHP20396 242 aaPredicted RBP23.05■■□□□ 1.28
LCMT1-209ENST00000574450 ATP1B4Q9UN42 357 aaPredicted RBP23.04■■□□□ 1.28
LCMT1-209ENST00000574450 ABCC10Q5T3U5 1492 aa23.04■■□□□ 1.28
LCMT1-209ENST00000574450 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.03■■□□□ 1.28
LCMT1-209ENST00000574450 HNRNPUL2Q1KMD3 747 aaKnown RBP23.03■■□□□ 1.28
LCMT1-209ENST00000574450 EPRSP07814 1512 aaKnown RBP23.03■■□□□ 1.28
LCMT1-209ENST00000574450 CDK11AQ9UQ88 783 aaPredicted RBP23.02■■□□□ 1.28
LCMT1-209ENST00000574450 WDR7Q9Y4E6 1490 aa23.02■■□□□ 1.28
LCMT1-209ENST00000574450 PLEKHD1A6NEE1 506 aa23.01■■□□□ 1.27
LCMT1-209ENST00000574450 PCF11O94913 1555 aaKnown RBP23.01■■□□□ 1.27
LCMT1-209ENST00000574450 VPS8Q8N3P4 1428 aa23■■□□□ 1.27
LCMT1-209ENST00000574450 CCDC18Q5T9S5 1454 aa23■■□□□ 1.27
LCMT1-209ENST00000574450 ARID3CA6NKF2 412 aa23■■□□□ 1.27
LCMT1-209ENST00000574450 FAM69CQ0P6D2 419 aa22.97■■□□□ 1.27
LCMT1-209ENST00000574450 DIP2BQ9P265 1576 aa22.96■■□□□ 1.27
LCMT1-209ENST00000574450 GLI2P10070 1586 aa22.95■■□□□ 1.26
LCMT1-209ENST00000574450 CDK13Q14004 1512 aaKnown RBP22.94■■□□□ 1.26
LCMT1-209ENST00000574450 KIF13AQ9H1H9 1805 aa22.93■■□□□ 1.26
LCMT1-209ENST00000574450 KCNH8Q96L42 1107 aa22.91■■□□□ 1.26
LCMT1-209ENST00000574450 LRRIQ1Q96JM4 1722 aa22.91■■□□□ 1.26
LCMT1-209ENST00000574450 TROQ12816 1431 aaPredicted RBP22.85■■□□□ 1.25
LCMT1-209ENST00000574450 MAP3K1Q13233 1512 aa22.83■■□□□ 1.25
LCMT1-209ENST00000574450 CFAP43Q8NDM7 1665 aa22.82■■□□□ 1.24
LCMT1-209ENST00000574450 ABCA9Q8IUA7 1624 aa22.81■■□□□ 1.24
LCMT1-209ENST00000574450 MAP3K4Q9Y6R4 1608 aa22.81■■□□□ 1.24
LCMT1-209ENST00000574450 APLP2Q06481 763 aa22.8■■□□□ 1.24
LCMT1-209ENST00000574450 CD109Q6YHK3 1445 aa22.8■■□□□ 1.24
LCMT1-209ENST00000574450 MTUS2Q5JR59 1369 aa22.77■■□□□ 1.24
LCMT1-209ENST00000574450 TIAM1Q13009 1591 aa22.76■■□□□ 1.23
LCMT1-209ENST00000574450 MAGI3Q5TCQ9 1506 aa22.76■■□□□ 1.23
LCMT1-209ENST00000574450 KIF14Q15058 1648 aa22.75■■□□□ 1.23
LCMT1-209ENST00000574450 TEX14Q8IWB6 1497 aa22.74■■□□□ 1.23
LCMT1-209ENST00000574450 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.74■■□□□ 1.23
LCMT1-209ENST00000574450 EHBP1L1Q8N3D4 1523 aa22.72■■□□□ 1.23
LCMT1-209ENST00000574450 TSPOAP1O95153 1857 aa22.71■■□□□ 1.23
LCMT1-209ENST00000574450 PHLDB1Q86UU1 1377 aa22.7■■□□□ 1.22
LCMT1-209ENST00000574450 LRRC9Q6ZRR7 1453 aa22.69■■□□□ 1.22
LCMT1-209ENST00000574450 PPRC1Q5VV67 1664 aaKnown RBP22.68■■□□□ 1.22
LCMT1-209ENST00000574450 TTC37Q6PGP7 1564 aa22.67■■□□□ 1.22
LCMT1-209ENST00000574450 PLCH2O75038 1416 aa22.67■■□□□ 1.22
LCMT1-209ENST00000574450 ARAP3Q8WWN8 1544 aa22.67■■□□□ 1.22
LCMT1-209ENST00000574450 NEO1Q92859 1461 aa22.64■■□□□ 1.21
LCMT1-209ENST00000574450 KANK4Q5T7N3 995 aaPredicted RBP22.62■■□□□ 1.21
LCMT1-209ENST00000574450 EFCAB2Q5VUJ9 269 aa22.62■■□□□ 1.21
LCMT1-209ENST00000574450 MYO5CQ9NQX4 1742 aa22.62■■□□□ 1.21
LCMT1-209ENST00000574450 SUPT6HQ7KZ85 1726 aaKnown RBP22.61■■□□□ 1.21
LCMT1-209ENST00000574450 CCNB3Q8WWL7 1395 aa22.6■■□□□ 1.21
LCMT1-209ENST00000574450 CFAP74Q9C0B2 1584 aa22.59■■□□□ 1.21
LCMT1-209ENST00000574450 FANCAO15360 1455 aa22.59■■□□□ 1.21
LCMT1-209ENST00000574450 GPATCH8Q9UKJ3 1502 aaKnown RBP22.57■■□□□ 1.2
LCMT1-209ENST00000574450 NCOA2Q15596 1464 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms