RNA–Protein interactions for RNA: ENST00000574437.5

ABR-228, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5 BASIC

Gene ABR, Length 3,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-228ENST00000574437 ERICH3Q5RHP9 1530 aa21.46■■□□□ 1.03
ABR-228ENST00000574437 CCNB3Q8WWL7 1395 aa21.44■■□□□ 1.02
ABR-228ENST00000574437 TDRD9Q8NDG6 1382 aaKnown RBP21.44■■□□□ 1.02
ABR-228ENST00000574437 DNMBPQ6XZF7 1577 aa21.42■■□□□ 1.02
ABR-228ENST00000574437 RRBP1Q9P2E9 1410 aaKnown RBP21.4■■□□□ 1.02
ABR-228ENST00000574437 CARMIL1Q5VZK9 1371 aa21.4■■□□□ 1.02
ABR-228ENST00000574437 KIF21AQ7Z4S6 1674 aa21.39■■□□□ 1.01
ABR-228ENST00000574437 ATP1B4Q9UN42 357 aaPredicted RBP21.38■■□□□ 1.01
ABR-228ENST00000574437 KCNH8Q96L42 1107 aa21.37■■□□□ 1.01
ABR-228ENST00000574437 ARHGAP35Q9NRY4 1499 aa21.34■■□□□ 1.01
ABR-228ENST00000574437 FAM50AQ14320 339 aaKnown RBP21.34■■□□□ 1.01
ABR-228ENST00000574437 RAB3GAP2Q9H2M9 1393 aa21.33■■□□□ 1.01
ABR-228ENST00000574437 P3H3Q8IVL6 736 aa21.32■■□□□ 1
ABR-228ENST00000574437 ABCA10Q8WWZ4 1543 aa21.29■■□□□ 1
ABR-228ENST00000574437 DDX10Q13206 875 aaKnown RBP21.28■■□□□ 1
ABR-228ENST00000574437 BCANQ96GW7 911 aa21.28■■□□□ 1
ABR-228ENST00000574437 SIN3AQ96ST3 1273 aa21.28■■□□□ 1
ABR-228ENST00000574437 HIRIP3Q9BW71 556 aaPredicted RBP21.23■□□□□ 0.99
ABR-228ENST00000574437 ERCC6Q03468 1493 aa21.21■□□□□ 0.99
ABR-228ENST00000574437 AQRO60306 1485 aaKnown RBP eCLIP21.21■□□□□ 0.99
ABR-228ENST00000574437 TSHZ2Q9NRE2 1034 aa21.2■□□□□ 0.98
ABR-228ENST00000574437 SETD5Q9C0A6 1442 aa21.18■□□□□ 0.98
ABR-228ENST00000574437 GAPVD1Q14C86 1478 aa21.17■□□□□ 0.98
ABR-228ENST00000574437 MRC2Q9UBG0 1479 aa21.17■□□□□ 0.98
ABR-228ENST00000574437 MAPKBP1O60336 1514 aa21.15■□□□□ 0.98
ABR-228ENST00000574437 PHLDB1Q86UU1 1377 aa21.14■□□□□ 0.98
ABR-228ENST00000574437 FKBP8Q14318 412 aa21.14■□□□□ 0.98
ABR-228ENST00000574437 TIAM1Q13009 1591 aa21.11■□□□□ 0.97
ABR-228ENST00000574437 ZNF608Q9ULD9 1512 aaPredicted RBP21.1■□□□□ 0.97
ABR-228ENST00000574437 LRRC9Q6ZRR7 1453 aa21.09■□□□□ 0.97
ABR-228ENST00000574437 WDR97A6NE52 1622 aa21.08■□□□□ 0.96
ABR-228ENST00000574437 TRIM52Q96A61 297 aa21.07■□□□□ 0.96
ABR-228ENST00000574437 TARBP1Q13395 1621 aaKnown RBP21.07■□□□□ 0.96
ABR-228ENST00000574437 NEFLP07196 543 aa21.04■□□□□ 0.96
ABR-228ENST00000574437 ANP32CO43423 234 aa21.02■□□□□ 0.96
ABR-228ENST00000574437 ABCA5Q8WWZ7 1642 aa21.02■□□□□ 0.96
ABR-228ENST00000574437 FHAD1B1AJZ9 1412 aa21.01■□□□□ 0.95
ABR-228ENST00000574437 FBLN2P98095 1184 aa21■□□□□ 0.95
ABR-228ENST00000574437 PPP1R15AO75807 674 aaPredicted RBP21■□□□□ 0.95
ABR-228ENST00000574437 FHOD3Q2V2M9 1422 aa21■□□□□ 0.95
ABR-228ENST00000574437 MAP3K1Q13233 1512 aa20.97■□□□□ 0.95
ABR-228ENST00000574437 WDR62O43379 1518 aa20.96■□□□□ 0.95
ABR-228ENST00000574437 TONSLQ96HA7 1378 aa20.93■□□□□ 0.94
ABR-228ENST00000574437 CUL7Q14999 1698 aa20.93■□□□□ 0.94
ABR-228ENST00000574437 ANP32EQ9BTT0 268 aa20.93■□□□□ 0.94
ABR-228ENST00000574437 IFT140Q96RY7 1462 aa20.92■□□□□ 0.94
ABR-228ENST00000574437 PCF11O94913 1555 aaKnown RBP20.92■□□□□ 0.94
ABR-228ENST00000574437 TIMELESSQ9UNS1 1208 aa20.92■□□□□ 0.94
ABR-228ENST00000574437 GRIN2BQ13224 1484 aa20.89■□□□□ 0.93
ABR-228ENST00000574437 ARID3CA6NKF2 412 aa20.88■□□□□ 0.93
ABR-228ENST00000574437 CCER2I3L3R5 266 aa20.87■□□□□ 0.93
ABR-228ENST00000574437 THOC2Q8NI27 1593 aaKnown RBP20.86■□□□□ 0.93
ABR-228ENST00000574437 CHMP7Q8WUX9 453 aaPredicted RBP20.85■□□□□ 0.93
ABR-228ENST00000574437 SNAPC4Q5SXM2 1469 aa20.83■□□□□ 0.93
ABR-228ENST00000574437 MTUS2Q5JR59 1369 aa20.83■□□□□ 0.93
ABR-228ENST00000574437 PBRM1Q86U86 1689 aa20.83■□□□□ 0.92
ABR-228ENST00000574437 CFAP43Q8NDM7 1665 aa20.8■□□□□ 0.92
ABR-228ENST00000574437 RBM19Q9Y4C8 960 aaKnown RBP20.79■□□□□ 0.92
ABR-228ENST00000574437 EIF4G3O43432 1585 aaKnown RBP20.78■□□□□ 0.92
ABR-228ENST00000574437 FGD6Q6ZV73 1430 aa20.78■□□□□ 0.92
ABR-228ENST00000574437 CASKIN1Q8WXD9 1431 aa20.78■□□□□ 0.92
ABR-228ENST00000574437 HNRNPUQ00839 825 aaKnown RBP eCLIP20.78■□□□□ 0.92
ABR-228ENST00000574437 FYCO1Q9BQS8 1478 aa20.78■□□□□ 0.92
ABR-228ENST00000574437 CTTNBP2Q8WZ74 1663 aa20.77■□□□□ 0.92
ABR-228ENST00000574437 CCDC18Q5T9S5 1454 aa20.77■□□□□ 0.92
ABR-228ENST00000574437 IRX6P78412 446 aaPredicted RBP20.77■□□□□ 0.91
ABR-228ENST00000574437 ADAMTS12P58397 1594 aa20.76■□□□□ 0.91
ABR-228ENST00000574437 CHIC2Q9UKJ5 165 aa20.75■□□□□ 0.91
ABR-228ENST00000574437 RRP7BPQ9NSQ0 103 aa20.73■□□□□ 0.91
ABR-228ENST00000574437 PTPRKQ15262 1439 aa20.71■□□□□ 0.91
ABR-228ENST00000574437 FMN1Q68DA7 1419 aa20.71■□□□□ 0.91
ABR-228ENST00000574437 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.71■□□□□ 0.91
ABR-228ENST00000574437 UACAQ9BZF9 1416 aa20.69■□□□□ 0.9
ABR-228ENST00000574437 EFCAB5A4FU69 1503 aa20.68■□□□□ 0.9
ABR-228ENST00000574437 GRIN2AQ12879 1464 aa20.67■□□□□ 0.9
ABR-228ENST00000574437 HFM1A2PYH4 1435 aa20.66■□□□□ 0.9
ABR-228ENST00000574437 IQGAP2Q13576 1575 aa20.65■□□□□ 0.9
ABR-228ENST00000574437 HSPA5P11021 654 aaKnown RBP20.64■□□□□ 0.89
ABR-228ENST00000574437 NAIPQ13075 1403 aa20.63■□□□□ 0.89
ABR-228ENST00000574437 JPH4Q96JJ6 628 aa20.61■□□□□ 0.89
ABR-228ENST00000574437 NCOA2Q15596 1464 aa20.61■□□□□ 0.89
ABR-228ENST00000574437 SAMD9Q5K651 1589 aa20.61■□□□□ 0.89
ABR-228ENST00000574437 PTPN23Q9H3S7 1636 aa20.6■□□□□ 0.89
ABR-228ENST00000574437 MYOM3Q5VTT5 1437 aa20.6■□□□□ 0.89
ABR-228ENST00000574437 SYNJ2O15056 1496 aa20.59■□□□□ 0.89
ABR-228ENST00000574437 KIAA0586Q9BVV6 1533 aa20.59■□□□□ 0.89
ABR-228ENST00000574437 WASHC2AQ641Q2 1341 aa20.59■□□□□ 0.89
ABR-228ENST00000574437 MAGI1Q96QZ7 1491 aaPredicted RBP20.59■□□□□ 0.89
ABR-228ENST00000574437 CDK11AQ9UQ88 783 aaPredicted RBP20.58■□□□□ 0.88
ABR-228ENST00000574437 EIF4G2P78344 907 aaKnown RBP eCLIP20.57■□□□□ 0.88
ABR-228ENST00000574437 FOXD1Q16676 465 aa20.57■□□□□ 0.88
ABR-228ENST00000574437 FAM9BQ8IZU0 186 aa20.56■□□□□ 0.88
ABR-228ENST00000574437 CNGB1Q14028 1251 aaPredicted RBP20.54■□□□□ 0.88
ABR-228ENST00000574437 CCDC184Q52MB2 194 aa20.54■□□□□ 0.88
ABR-228ENST00000574437 CEP170Q5SW79 1584 aa20.54■□□□□ 0.88
ABR-228ENST00000574437 DISP1Q96F81 1524 aa20.52■□□□□ 0.88
ABR-228ENST00000574437 ERICH6Q7L0X2 663 aa20.5■□□□□ 0.87
ABR-228ENST00000574437 L3MBTL2Q969R5 705 aa20.5■□□□□ 0.87
ABR-228ENST00000574437 MSH5O43196 834 aa20.49■□□□□ 0.87
ABR-228ENST00000574437 MPHOSPH9Q99550 1183 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms