RNA–Protein interactions for RNA: ENST00000574437.5

ABR-228, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5 BASIC

Gene ABR, Length 3,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-228ENST00000574437 NISCHQ9Y2I1 1504 aa30.16■■■□□ 2.42
ABR-228ENST00000574437 SHROOM4Q9ULL8 1493 aa25.89■■□□□ 1.74
ABR-228ENST00000574437 CCDC180Q9P1Z9 1646 aa25.81■■□□□ 1.72
ABR-228ENST00000574437 DCAF8L2P0C7V8 631 aa25.63■■□□□ 1.69
ABR-228ENST00000574437 SUPT5HO00267 1087 aaKnown RBP25.59■■□□□ 1.69
ABR-228ENST00000574437 ZCCHC6Q5VYS8 1495 aaKnown RBP25.31■■□□□ 1.64
ABR-228ENST00000574437 ABCC9O60706 1549 aa24.9■■□□□ 1.58
ABR-228ENST00000574437 CHIC1Q5VXU3 224 aa24.8■■□□□ 1.56
ABR-228ENST00000574437 MYO15BQ96JP2 1530 aa24.71■■□□□ 1.55
ABR-228ENST00000574437 HRCP23327 699 aa24.62■■□□□ 1.53
ABR-228ENST00000574437 DCAF1Q9Y4B6 1507 aa24.6■■□□□ 1.53
ABR-228ENST00000574437 PCGF6Q9BYE7 350 aa24.58■■□□□ 1.53
ABR-228ENST00000574437 SCRIBQ14160 1630 aa24.29■■□□□ 1.48
ABR-228ENST00000574437 PPARGC1BQ86YN6 1023 aaKnown RBP24.26■■□□□ 1.47
ABR-228ENST00000574437 LOC105371045A0A1W2PR82 267 aa24.26■■□□□ 1.47
ABR-228ENST00000574437 NACADO15069 1562 aa24.13■■□□□ 1.45
ABR-228ENST00000574437 RB1CC1Q8TDY2 1594 aa23.93■■□□□ 1.42
ABR-228ENST00000574437 TRIM26Q12899 539 aaPredicted RBP23.85■■□□□ 1.41
ABR-228ENST00000574437 PABPN1Q86U42 306 aaKnown RBP eCLIP23.78■■□□□ 1.4
ABR-228ENST00000574437 FAM9AQ8IZU1 332 aaPredicted RBP23.72■■□□□ 1.39
ABR-228ENST00000574437 CECR2Q9BXF3 1484 aa23.7■■□□□ 1.38
ABR-228ENST00000574437 TRIM41Q8WV44 630 aa23.68■■□□□ 1.38
ABR-228ENST00000574437 EHMT2Q96KQ7 1210 aa23.68■■□□□ 1.38
ABR-228ENST00000574437 RSF1Q96T23 1441 aaPredicted RBP23.64■■□□□ 1.38
ABR-228ENST00000574437 UNC13AQ9UPW8 1703 aa23.51■■□□□ 1.35
ABR-228ENST00000574437 MROH2BQ7Z745 1585 aa23.47■■□□□ 1.35
ABR-228ENST00000574437 ZEB1P37275 1124 aaPredicted RBP23.42■■□□□ 1.34
ABR-228ENST00000574437 BICRAQ9NZM4 1560 aa23.33■■□□□ 1.33
ABR-228ENST00000574437 WIZO95785 1651 aa23.28■■□□□ 1.32
ABR-228ENST00000574437 BAZ1AQ9NRL2 1556 aaPredicted RBP23.18■■□□□ 1.3
ABR-228ENST00000574437 SMARCA4P51532 1647 aa23.08■■□□□ 1.29
ABR-228ENST00000574437 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.01■■□□□ 1.27
ABR-228ENST00000574437 TTBK1Q5TCY1 1321 aaPredicted RBP22.98■■□□□ 1.27
ABR-228ENST00000574437 CCER1Q8TC90 406 aaPredicted RBP22.97■■□□□ 1.27
ABR-228ENST00000574437 SCAF1Q9H7N4 1312 aaKnown RBP22.96■■□□□ 1.27
ABR-228ENST00000574437 CCDC88BA6NC98 1476 aa22.82■■□□□ 1.24
ABR-228ENST00000574437 TOP2AP11388 1531 aaKnown RBP22.81■■□□□ 1.24
ABR-228ENST00000574437 PELP1Q8IZL8 1130 aaKnown RBP22.76■■□□□ 1.23
ABR-228ENST00000574437 ATAD2BQ9ULI0 1458 aa22.76■■□□□ 1.23
ABR-228ENST00000574437 SMARCA2P51531 1590 aa22.7■■□□□ 1.22
ABR-228ENST00000574437 BAZ1BQ9UIG0 1483 aaKnown RBP22.65■■□□□ 1.22
ABR-228ENST00000574437 EIF4G1Q04637 1599 aaKnown RBP22.63■■□□□ 1.21
ABR-228ENST00000574437 DIEXFQ68CQ4 756 aaKnown RBP22.63■■□□□ 1.21
ABR-228ENST00000574437 ABCC8Q09428 1581 aa22.62■■□□□ 1.21
ABR-228ENST00000574437 NEUROD1Q13562 356 aa22.61■■□□□ 1.21
ABR-228ENST00000574437 ACIN1Q9UKV3 1341 aaKnown RBP22.61■■□□□ 1.21
ABR-228ENST00000574437 UBTFP17480 764 aaKnown RBP22.6■■□□□ 1.21
ABR-228ENST00000574437 PEG3Q9GZU2 1588 aa22.6■■□□□ 1.21
ABR-228ENST00000574437 CEP162Q5TB80 1403 aa22.54■■□□□ 1.2
ABR-228ENST00000574437 SOGA1O94964 1423 aa22.51■■□□□ 1.19
ABR-228ENST00000574437 CENPBP07199 599 aaPredicted RBP22.48■■□□□ 1.19
ABR-228ENST00000574437 CSRNP3Q8WYN3 585 aa22.46■■□□□ 1.19
ABR-228ENST00000574437 GTF3C3Q9Y5Q9 886 aa22.46■■□□□ 1.19
ABR-228ENST00000574437 WRNQ14191 1432 aaPredicted RBP eCLIP22.42■■□□□ 1.18
ABR-228ENST00000574437 NCAPD3P42695 1498 aa22.41■■□□□ 1.18
ABR-228ENST00000574437 TNIKQ9UKE5 1360 aa22.4■■□□□ 1.18
ABR-228ENST00000574437 RUSC2Q8N2Y8 1516 aa22.38■■□□□ 1.17
ABR-228ENST00000574437 HNRNPUL2Q1KMD3 747 aaKnown RBP22.34■■□□□ 1.17
ABR-228ENST00000574437 YTHDC1Q96MU7 727 aaKnown RBP22.33■■□□□ 1.17
ABR-228ENST00000574437 ZNF316A6NFI3 1004 aaPredicted RBP22.31■■□□□ 1.16
ABR-228ENST00000574437 CC2D2AQ9P2K1 1620 aa22.29■■□□□ 1.16
ABR-228ENST00000574437 RANGAP1P46060 587 aaPredicted RBP22.28■■□□□ 1.16
ABR-228ENST00000574437 DNAJC5BQ9UF47 199 aa22.27■■□□□ 1.16
ABR-228ENST00000574437 EEA1Q15075 1411 aa22.25■■□□□ 1.15
ABR-228ENST00000574437 HMGXB3Q12766 1538 aa22.25■■□□□ 1.15
ABR-228ENST00000574437 GOLGA3Q08378 1498 aa22.22■■□□□ 1.15
ABR-228ENST00000574437 APLP2Q06481 763 aa22.17■■□□□ 1.14
ABR-228ENST00000574437 MIER1Q8N108 512 aa22.1■■□□□ 1.13
ABR-228ENST00000574437 SYNJ1O43426 1573 aa22.1■■□□□ 1.13
ABR-228ENST00000574437 CLIP1P30622 1438 aa22.07■■□□□ 1.12
ABR-228ENST00000574437 CEP164Q9UPV0 1460 aa22.04■■□□□ 1.12
ABR-228ENST00000574437 CFTRP13569 1480 aa22.03■■□□□ 1.12
ABR-228ENST00000574437 CADPSQ9ULU8 1353 aa22■■□□□ 1.11
ABR-228ENST00000574437 NESP48681 1621 aa21.94■■□□□ 1.1
ABR-228ENST00000574437 VPS8Q8N3P4 1428 aa21.93■■□□□ 1.1
ABR-228ENST00000574437 RAPGEF2Q9Y4G8 1499 aa21.9■■□□□ 1.1
ABR-228ENST00000574437 CUX1P39880 1505 aa21.87■■□□□ 1.09
ABR-228ENST00000574437 KIF21BO75037 1637 aa21.86■■□□□ 1.09
ABR-228ENST00000574437 TOP2BQ02880 1626 aa21.83■■□□□ 1.08
ABR-228ENST00000574437 FANCD2Q9BXW9 1451 aa21.76■■□□□ 1.07
ABR-228ENST00000574437 ITGAEP38570 1179 aa21.71■■□□□ 1.07
ABR-228ENST00000574437 KANK4Q5T7N3 995 aaPredicted RBP21.71■■□□□ 1.07
ABR-228ENST00000574437 BIVM-ERCC5R4GMW8 1640 aa21.7■■□□□ 1.06
ABR-228ENST00000574437 DHX57Q6P158 1386 aaKnown RBP21.66■■□□□ 1.06
ABR-228ENST00000574437 MYT1Q01538 1121 aa21.65■■□□□ 1.06
ABR-228ENST00000574437 FGD5Q6ZNL6 1462 aa21.62■■□□□ 1.05
ABR-228ENST00000574437 CUX2O14529 1486 aa21.6■■□□□ 1.05
ABR-228ENST00000574437 KIF27Q86VH2 1401 aa21.6■■□□□ 1.05
ABR-228ENST00000574437 CLSPNQ9HAW4 1339 aa21.59■■□□□ 1.05
ABR-228ENST00000574437 RAD54L2Q9Y4B4 1467 aa21.58■■□□□ 1.05
ABR-228ENST00000574437 PRDM2Q13029 1718 aa21.57■■□□□ 1.04
ABR-228ENST00000574437 ARAP1Q96P48 1450 aa21.55■■□□□ 1.04
ABR-228ENST00000574437 TOPBP1Q92547 1522 aa21.51■■□□□ 1.03
ABR-228ENST00000574437 PRXQ9BXM0 1461 aa21.51■■□□□ 1.03
ABR-228ENST00000574437 LAMC3Q9Y6N6 1575 aa21.51■■□□□ 1.03
ABR-228ENST00000574437 PDS5BQ9NTI5 1447 aa21.5■■□□□ 1.03
ABR-228ENST00000574437 IGF1RP08069 1367 aa21.5■■□□□ 1.03
ABR-228ENST00000574437 URB2Q14146 1524 aaKnown RBP21.48■■□□□ 1.03
ABR-228ENST00000574437 POLA1P09884 1462 aaPredicted RBP21.47■■□□□ 1.03
ABR-228ENST00000574437 SUPT16HQ9Y5B9 1047 aaKnown RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms