RNA–Protein interactions for RNA: ENST00000574379.2

NCBP3-203, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-203ENST00000574379 ADGRL1O94910 1474 aa17.82■□□□□ 0.44
NCBP3-203ENST00000574379 DIP2BQ9P265 1576 aa17.78■□□□□ 0.44
NCBP3-203ENST00000574379 GRIN2AQ12879 1464 aa17.77■□□□□ 0.44
NCBP3-203ENST00000574379 LMTK3Q96Q04 1460 aa17.76■□□□□ 0.43
NCBP3-203ENST00000574379 PPP6R1Q9UPN7 881 aa17.74■□□□□ 0.43
NCBP3-203ENST00000574379 ADRA2BP18089 450 aa17.72■□□□□ 0.43
NCBP3-203ENST00000574379 PRG4Q92954 1404 aaPredicted RBP17.72■□□□□ 0.43
NCBP3-203ENST00000574379 CUX1P39880 1505 aa17.71■□□□□ 0.43
NCBP3-203ENST00000574379 SHROOM2Q13796 1616 aa17.7■□□□□ 0.42
NCBP3-203ENST00000574379 MAPKBP1O60336 1514 aa17.69■□□□□ 0.42
NCBP3-203ENST00000574379 NUP160Q12769 1436 aa17.68■□□□□ 0.42
NCBP3-203ENST00000574379 ABCA5Q8WWZ7 1642 aa17.65■□□□□ 0.42
NCBP3-203ENST00000574379 ADAMTS12P58397 1594 aa17.62■□□□□ 0.41
NCBP3-203ENST00000574379 JPH4Q96JJ6 628 aa17.61■□□□□ 0.41
NCBP3-203ENST00000574379 ABCA10Q8WWZ4 1543 aa17.59■□□□□ 0.41
NCBP3-203ENST00000574379 ADCY10Q96PN6 1610 aa17.58■□□□□ 0.41
NCBP3-203ENST00000574379 SOCS7O14512 581 aa17.57■□□□□ 0.4
NCBP3-203ENST00000574379 FHAD1B1AJZ9 1412 aa17.55■□□□□ 0.4
NCBP3-203ENST00000574379 DISP3Q9P2K9 1392 aa17.53■□□□□ 0.4
NCBP3-203ENST00000574379 TTBK1Q5TCY1 1321 aaPredicted RBP17.52■□□□□ 0.4
NCBP3-203ENST00000574379 ILDR2Q71H61 639 aa17.52■□□□□ 0.4
NCBP3-203ENST00000574379 PIAS4Q8N2W9 510 aaPredicted RBP17.51■□□□□ 0.39
NCBP3-203ENST00000574379 TOP2BQ02880 1626 aa17.45■□□□□ 0.38
NCBP3-203ENST00000574379 BIVM-ERCC5R4GMW8 1640 aa17.45■□□□□ 0.38
NCBP3-203ENST00000574379 PPRC1Q5VV67 1664 aaKnown RBP17.42■□□□□ 0.38
NCBP3-203ENST00000574379 COL17A1Q9UMD9 1497 aaPredicted RBP17.41■□□□□ 0.38
NCBP3-203ENST00000574379 WRNQ14191 1432 aaPredicted RBP eCLIP17.4■□□□□ 0.38
NCBP3-203ENST00000574379 RUSC2Q8N2Y8 1516 aa17.4■□□□□ 0.38
NCBP3-203ENST00000574379 ASXL2Q76L83 1435 aa17.37■□□□□ 0.37
NCBP3-203ENST00000574379 ERICH3Q5RHP9 1530 aa17.35■□□□□ 0.37
NCBP3-203ENST00000574379 GLI2P10070 1586 aa17.33■□□□□ 0.37
NCBP3-203ENST00000574379 PLB1Q6P1J6 1458 aa17.33■□□□□ 0.37
NCBP3-203ENST00000574379 TEX14Q8IWB6 1497 aa17.32■□□□□ 0.36
NCBP3-203ENST00000574379 PTPRGP23470 1445 aa17.3■□□□□ 0.36
NCBP3-203ENST00000574379 ABCC2Q92887 1545 aa17.28■□□□□ 0.36
NCBP3-203ENST00000574379 CUL7Q14999 1698 aa17.27■□□□□ 0.36
NCBP3-203ENST00000574379 KIF21BO75037 1637 aa17.25■□□□□ 0.35
NCBP3-203ENST00000574379 CERKQ8TCT0 537 aa17.24■□□□□ 0.35
NCBP3-203ENST00000574379 MAP3K4Q9Y6R4 1608 aa17.24■□□□□ 0.35
NCBP3-203ENST00000574379 MSH5O43196 834 aa17.23■□□□□ 0.35
NCBP3-203ENST00000574379 EPRSP07814 1512 aaKnown RBP17.22■□□□□ 0.35
NCBP3-203ENST00000574379 SPATA31D1Q6ZQQ2 1576 aa17.21■□□□□ 0.35
NCBP3-203ENST00000574379 PTPRMP28827 1452 aa17.19■□□□□ 0.34
NCBP3-203ENST00000574379 KIAA0586Q9BVV6 1533 aa17.19■□□□□ 0.34
NCBP3-203ENST00000574379 PCF11O94913 1555 aaKnown RBP17.18■□□□□ 0.34
NCBP3-203ENST00000574379 TNIKQ9UKE5 1360 aa17.16■□□□□ 0.34
NCBP3-203ENST00000574379 HSPA2P54652 639 aa17.15■□□□□ 0.34
NCBP3-203ENST00000574379 CARMIL2Q6F5E8 1435 aa17.14■□□□□ 0.33
NCBP3-203ENST00000574379 ARID4BQ4LE39 1312 aaPredicted RBP17.11■□□□□ 0.33
NCBP3-203ENST00000574379 UACAQ9BZF9 1416 aa17.11■□□□□ 0.33
NCBP3-203ENST00000574379 UHRF1BP1LA0JNW5 1464 aa17.08■□□□□ 0.32
NCBP3-203ENST00000574379 KCNH8Q96L42 1107 aa17.07■□□□□ 0.32
NCBP3-203ENST00000574379 ZCCHC11Q5TAX3 1644 aaKnown RBP17.07■□□□□ 0.32
NCBP3-203ENST00000574379 CD109Q6YHK3 1445 aa17.06■□□□□ 0.32
NCBP3-203ENST00000574379 ADAMTSL3P82987 1691 aa17.05■□□□□ 0.32
NCBP3-203ENST00000574379 KDM5BQ9UGL1 1544 aa17.03■□□□□ 0.32
NCBP3-203ENST00000574379 WDR7Q9Y4E6 1490 aa17.02■□□□□ 0.32
NCBP3-203ENST00000574379 MADDQ8WXG6 1647 aa17.02■□□□□ 0.31
NCBP3-203ENST00000574379 KIF27Q86VH2 1401 aa17■□□□□ 0.31
NCBP3-203ENST00000574379 MAGI3Q5TCQ9 1506 aa16.99■□□□□ 0.31
NCBP3-203ENST00000574379 CFAP43Q8NDM7 1665 aa16.97■□□□□ 0.31
NCBP3-203ENST00000574379 RIMS1Q86UR5 1692 aaKnown RBP16.97■□□□□ 0.31
NCBP3-203ENST00000574379 BCORL1Q5H9F3 1711 aa16.95■□□□□ 0.3
NCBP3-203ENST00000574379 IQGAP2Q13576 1575 aa16.93■□□□□ 0.3
NCBP3-203ENST00000574379 IGF1RP08069 1367 aa16.92■□□□□ 0.3
NCBP3-203ENST00000574379 RAPGEF3O95398 923 aa16.91■□□□□ 0.3
NCBP3-203ENST00000574379 ARAP3Q8WWN8 1544 aa16.88■□□□□ 0.29
NCBP3-203ENST00000574379 DISP1Q96F81 1524 aa16.88■□□□□ 0.29
NCBP3-203ENST00000574379 CARMIL1Q5VZK9 1371 aa16.84■□□□□ 0.29
NCBP3-203ENST00000574379 ARID3CA6NKF2 412 aa16.82■□□□□ 0.28
NCBP3-203ENST00000574379 DMRT2Q9Y5R5 561 aa16.82■□□□□ 0.28
NCBP3-203ENST00000574379 MLECQ14165 292 aa16.81■□□□□ 0.28
NCBP3-203ENST00000574379 KIAA0556O60303 1618 aa16.78■□□□□ 0.28
NCBP3-203ENST00000574379 POGZQ7Z3K3 1410 aa16.76■□□□□ 0.27
NCBP3-203ENST00000574379 RAPGEF2Q9Y4G8 1499 aa16.75■□□□□ 0.27
NCBP3-203ENST00000574379 YEATS2Q9ULM3 1422 aa16.75■□□□□ 0.27
NCBP3-203ENST00000574379 PHLDB1Q86UU1 1377 aa16.74■□□□□ 0.27
NCBP3-203ENST00000574379 CTTNBP2Q8WZ74 1663 aa16.73■□□□□ 0.27
NCBP3-203ENST00000574379 PRXQ9BXM0 1461 aa16.72■□□□□ 0.27
NCBP3-203ENST00000574379 EEA1Q15075 1411 aa16.71■□□□□ 0.27
NCBP3-203ENST00000574379 UGGT2Q9NYU1 1516 aa16.71■□□□□ 0.27
NCBP3-203ENST00000574379 FANCAO15360 1455 aa16.71■□□□□ 0.27
NCBP3-203ENST00000574379 ARHGEF40Q8TER5 1519 aa16.7■□□□□ 0.26
NCBP3-203ENST00000574379 FRMPD1Q5SYB0 1578 aa16.69■□□□□ 0.26
NCBP3-203ENST00000574379 PREX1Q8TCU6 1659 aa16.69■□□□□ 0.26
NCBP3-203ENST00000574379 UBAP1LF5GYI3 381 aa16.68■□□□□ 0.26
NCBP3-203ENST00000574379 FER1L4A9Z1Z3 1794 aa16.68■□□□□ 0.26
NCBP3-203ENST00000574379 STRCQ7RTU9 1775 aa16.67■□□□□ 0.26
NCBP3-203ENST00000574379 CEBPAP49715 358 aaPredicted RBP16.67■□□□□ 0.26
NCBP3-203ENST00000574379 NEO1Q92859 1461 aa16.67■□□□□ 0.26
NCBP3-203ENST00000574379 AKNAQ7Z591 1439 aa16.65■□□□□ 0.26
NCBP3-203ENST00000574379 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.65■□□□□ 0.26
NCBP3-203ENST00000574379 HNRNPUL2Q1KMD3 747 aaKnown RBP16.65■□□□□ 0.26
NCBP3-203ENST00000574379 ABCA8O94911 1581 aa16.64■□□□□ 0.25
NCBP3-203ENST00000574379 FAM9AQ8IZU1 332 aaPredicted RBP16.64■□□□□ 0.25
NCBP3-203ENST00000574379 CSRNP3Q8WYN3 585 aa16.64■□□□□ 0.25
NCBP3-203ENST00000574379 SCAF1Q9H7N4 1312 aaKnown RBP16.64■□□□□ 0.25
NCBP3-203ENST00000574379 ABCA9Q8IUA7 1624 aa16.63■□□□□ 0.25
NCBP3-203ENST00000574379 TTC37Q6PGP7 1564 aa16.62■□□□□ 0.25
NCBP3-203ENST00000574379 UHRF1BP1Q6BDS2 1440 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms