RNA–Protein interactions for RNA: ENST00000574379.2

NCBP3-203, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-203ENST00000574379 NISCHQ9Y2I1 1504 aa24.35■■□□□ 1.49
NCBP3-203ENST00000574379 AEBP2Q6ZN18 517 aaPredicted RBP23.58■■□□□ 1.37
NCBP3-203ENST00000574379 ABCC9O60706 1549 aa23.37■■□□□ 1.33
NCBP3-203ENST00000574379 CHIC1Q5VXU3 224 aa22.7■■□□□ 1.22
NCBP3-203ENST00000574379 DNAJC5BQ9UF47 199 aa22.7■■□□□ 1.22
NCBP3-203ENST00000574379 CCDC180Q9P1Z9 1646 aa22.24■■□□□ 1.15
NCBP3-203ENST00000574379 RB1CC1Q8TDY2 1594 aa21.71■■□□□ 1.07
NCBP3-203ENST00000574379 PABPN1Q86U42 306 aaKnown RBP eCLIP21.65■■□□□ 1.06
NCBP3-203ENST00000574379 DNAJC5Q9H3Z4 198 aa21.53■■□□□ 1.04
NCBP3-203ENST00000574379 DCAF8L2P0C7V8 631 aa21.32■■□□□ 1
NCBP3-203ENST00000574379 NACADO15069 1562 aa21.27■□□□□ 0.99
NCBP3-203ENST00000574379 UNC13AQ9UPW8 1703 aa21.18■□□□□ 0.98
NCBP3-203ENST00000574379 CECR2Q9BXF3 1484 aa21.1■□□□□ 0.97
NCBP3-203ENST00000574379 BICRAQ9NZM4 1560 aa21.04■□□□□ 0.96
NCBP3-203ENST00000574379 CC2D2AQ9P2K1 1620 aa20.98■□□□□ 0.95
NCBP3-203ENST00000574379 EIF4G1Q04637 1599 aaKnown RBP20.67■□□□□ 0.9
NCBP3-203ENST00000574379 SHROOM4Q9ULL8 1493 aa20.59■□□□□ 0.89
NCBP3-203ENST00000574379 MYO15BQ96JP2 1530 aa20.53■□□□□ 0.88
NCBP3-203ENST00000574379 TRIM41Q8WV44 630 aa20.43■□□□□ 0.86
NCBP3-203ENST00000574379 CUX2O14529 1486 aa20.42■□□□□ 0.86
NCBP3-203ENST00000574379 SCRIBQ14160 1630 aa20.38■□□□□ 0.85
NCBP3-203ENST00000574379 ERCC6Q03468 1493 aa20.3■□□□□ 0.84
NCBP3-203ENST00000574379 ZCCHC6Q5VYS8 1495 aaKnown RBP20.21■□□□□ 0.83
NCBP3-203ENST00000574379 DCAF1Q9Y4B6 1507 aa20.07■□□□□ 0.8
NCBP3-203ENST00000574379 PHF23Q9BUL5 403 aaPredicted RBP19.98■□□□□ 0.79
NCBP3-203ENST00000574379 SENP3Q9H4L4 574 aaPredicted RBP19.98■□□□□ 0.79
NCBP3-203ENST00000574379 NESP48681 1621 aa19.76■□□□□ 0.75
NCBP3-203ENST00000574379 THOC2Q8NI27 1593 aaKnown RBP19.66■□□□□ 0.74
NCBP3-203ENST00000574379 SMARCA2P51531 1590 aa19.62■□□□□ 0.73
NCBP3-203ENST00000574379 NCAPD3P42695 1498 aa19.62■□□□□ 0.73
NCBP3-203ENST00000574379 ATAD2BQ9ULI0 1458 aa19.48■□□□□ 0.71
NCBP3-203ENST00000574379 KIF21AQ7Z4S6 1674 aa19.45■□□□□ 0.7
NCBP3-203ENST00000574379 BAZ1AQ9NRL2 1556 aaPredicted RBP19.43■□□□□ 0.7
NCBP3-203ENST00000574379 OSCARQ8IYS5 282 aa19.42■□□□□ 0.7
NCBP3-203ENST00000574379 HMGXB3Q12766 1538 aa19.4■□□□□ 0.7
NCBP3-203ENST00000574379 LAMC3Q9Y6N6 1575 aa19.39■□□□□ 0.69
NCBP3-203ENST00000574379 PDS5BQ9NTI5 1447 aa19.36■□□□□ 0.69
NCBP3-203ENST00000574379 TRHP20396 242 aaPredicted RBP19.32■□□□□ 0.68
NCBP3-203ENST00000574379 BAZ1BQ9UIG0 1483 aaKnown RBP19.32■□□□□ 0.68
NCBP3-203ENST00000574379 MRC2Q9UBG0 1479 aa19.24■□□□□ 0.67
NCBP3-203ENST00000574379 RIMBP3CA6NJZ7 1639 aa19.24■□□□□ 0.67
NCBP3-203ENST00000574379 RIMBP3BA6NNM3 1639 aa19.24■□□□□ 0.67
NCBP3-203ENST00000574379 RIMBP3Q9UFD9 1639 aa19.24■□□□□ 0.67
NCBP3-203ENST00000574379 SMARCA4P51532 1647 aa19.23■□□□□ 0.67
NCBP3-203ENST00000574379 WDR62O43379 1518 aa19.17■□□□□ 0.66
NCBP3-203ENST00000574379 CYB5RLQ6IPT4 315 aa19.11■□□□□ 0.65
NCBP3-203ENST00000574379 ARHGEF11O15085 1522 aa19.06■□□□□ 0.64
NCBP3-203ENST00000574379 CADPSQ9ULU8 1353 aa19.05■□□□□ 0.64
NCBP3-203ENST00000574379 CEP164Q9UPV0 1460 aa19■□□□□ 0.63
NCBP3-203ENST00000574379 PEG3Q9GZU2 1588 aa18.93■□□□□ 0.62
NCBP3-203ENST00000574379 FANCD2Q9BXW9 1451 aa18.88■□□□□ 0.61
NCBP3-203ENST00000574379 ARAP1Q96P48 1450 aa18.8■□□□□ 0.6
NCBP3-203ENST00000574379 MROH2BQ7Z745 1585 aa18.79■□□□□ 0.6
NCBP3-203ENST00000574379 URB2Q14146 1524 aaKnown RBP18.74■□□□□ 0.59
NCBP3-203ENST00000574379 ZNF608Q9ULD9 1512 aaPredicted RBP18.71■□□□□ 0.59
NCBP3-203ENST00000574379 FBLN2P98095 1184 aa18.7■□□□□ 0.58
NCBP3-203ENST00000574379 ILDR1Q86SU0 546 aaPredicted RBP18.69■□□□□ 0.58
NCBP3-203ENST00000574379 FOXD1Q16676 465 aa18.63■□□□□ 0.57
NCBP3-203ENST00000574379 IFT140Q96RY7 1462 aa18.62■□□□□ 0.57
NCBP3-203ENST00000574379 CHD1O14646 1710 aa18.62■□□□□ 0.57
NCBP3-203ENST00000574379 CFTRP13569 1480 aa18.58■□□□□ 0.57
NCBP3-203ENST00000574379 RSF1Q96T23 1441 aaPredicted RBP18.58■□□□□ 0.57
NCBP3-203ENST00000574379 WIZO95785 1651 aa18.56■□□□□ 0.56
NCBP3-203ENST00000574379 EIF4G3O43432 1585 aaKnown RBP18.55■□□□□ 0.56
NCBP3-203ENST00000574379 AQRO60306 1485 aaKnown RBP eCLIP18.46■□□□□ 0.54
NCBP3-203ENST00000574379 TOPBP1Q92547 1522 aa18.39■□□□□ 0.53
NCBP3-203ENST00000574379 PRDM2Q13029 1718 aa18.32■□□□□ 0.52
NCBP3-203ENST00000574379 CHMP7Q8WUX9 453 aaPredicted RBP18.31■□□□□ 0.52
NCBP3-203ENST00000574379 TOP2AP11388 1531 aaKnown RBP18.31■□□□□ 0.52
NCBP3-203ENST00000574379 PLPPR3Q6T4P5 718 aa18.3■□□□□ 0.52
NCBP3-203ENST00000574379 CLASP1Q7Z460 1538 aa18.29■□□□□ 0.52
NCBP3-203ENST00000574379 SYNJ1O43426 1573 aa18.28■□□□□ 0.52
NCBP3-203ENST00000574379 GAPVD1Q14C86 1478 aa18.27■□□□□ 0.52
NCBP3-203ENST00000574379 TARBP1Q13395 1621 aaKnown RBP18.25■□□□□ 0.51
NCBP3-203ENST00000574379 ABCC8Q09428 1581 aa18.25■□□□□ 0.51
NCBP3-203ENST00000574379 DNMBPQ6XZF7 1577 aa18.23■□□□□ 0.51
NCBP3-203ENST00000574379 SNAPC4Q5SXM2 1469 aa18.23■□□□□ 0.51
NCBP3-203ENST00000574379 TDRD9Q8NDG6 1382 aaKnown RBP18.2■□□□□ 0.5
NCBP3-203ENST00000574379 KDM4FA0A1W2PPD8 638 aa18.17■□□□□ 0.5
NCBP3-203ENST00000574379 RAD54L2Q9Y4B4 1467 aa18.15■□□□□ 0.5
NCBP3-203ENST00000574379 POLA1P09884 1462 aaPredicted RBP18.13■□□□□ 0.49
NCBP3-203ENST00000574379 SOGA1O94964 1423 aa18.08■□□□□ 0.49
NCBP3-203ENST00000574379 MAGI1Q96QZ7 1491 aaPredicted RBP18.07■□□□□ 0.48
NCBP3-203ENST00000574379 KIF13AQ9H1H9 1805 aa18.06■□□□□ 0.48
NCBP3-203ENST00000574379 CCDC88BA6NC98 1476 aa18.05■□□□□ 0.48
NCBP3-203ENST00000574379 SYNJ2O15056 1496 aa18.05■□□□□ 0.48
NCBP3-203ENST00000574379 ERCC6L2Q5T890 1561 aa18.02■□□□□ 0.48
NCBP3-203ENST00000574379 FAM69CQ0P6D2 419 aa18.01■□□□□ 0.47
NCBP3-203ENST00000574379 GRIN2BQ13224 1484 aa18.01■□□□□ 0.47
NCBP3-203ENST00000574379 KDM6BO15054 1643 aa17.96■□□□□ 0.47
NCBP3-203ENST00000574379 WDR97A6NE52 1622 aa17.94■□□□□ 0.46
NCBP3-203ENST00000574379 SUPT5HO00267 1087 aaKnown RBP17.92■□□□□ 0.46
NCBP3-203ENST00000574379 FGD5Q6ZNL6 1462 aa17.92■□□□□ 0.46
NCBP3-203ENST00000574379 HECW2Q9P2P5 1572 aa17.89■□□□□ 0.45
NCBP3-203ENST00000574379 PBRM1Q86U86 1689 aa17.88■□□□□ 0.45
NCBP3-203ENST00000574379 NPM1P06748 294 aaKnown RBP eCLIP17.88■□□□□ 0.45
NCBP3-203ENST00000574379 CEP170Q5SW79 1584 aa17.87■□□□□ 0.45
NCBP3-203ENST00000574379 FBXO41Q8TF61 875 aa17.87■□□□□ 0.45
NCBP3-203ENST00000574379 ABCC10Q5T3U5 1492 aa17.84■□□□□ 0.45
NCBP3-203ENST00000574379 TSPOAP1O95153 1857 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 333.2 ms