RNA–Protein interactions for RNA: ENST00000574266.1

ABR-227, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-227ENST00000574266 NPM1P06748 294 aaKnown RBP eCLIP29.88■■■□□ 2.37
ABR-227ENST00000574266 CUL7Q14999 1698 aa29.82■■■□□ 2.36
ABR-227ENST00000574266 CARMIL1Q5VZK9 1371 aa29.8■■■□□ 2.36
ABR-227ENST00000574266 KIAA0586Q9BVV6 1533 aa29.78■■■□□ 2.36
ABR-227ENST00000574266 RUSC2Q8N2Y8 1516 aa29.77■■■□□ 2.36
ABR-227ENST00000574266 CARMIL2Q6F5E8 1435 aa29.62■■■□□ 2.33
ABR-227ENST00000574266 TTBK1Q5TCY1 1321 aaPredicted RBP29.62■■■□□ 2.33
ABR-227ENST00000574266 FAM69CQ0P6D2 419 aa29.58■■■□□ 2.33
ABR-227ENST00000574266 PTPRGP23470 1445 aa29.57■■■□□ 2.32
ABR-227ENST00000574266 AEBP2Q6ZN18 517 aaPredicted RBP29.54■■■□□ 2.32
ABR-227ENST00000574266 RAPGEF2Q9Y4G8 1499 aa29.51■■■□□ 2.31
ABR-227ENST00000574266 TNIKQ9UKE5 1360 aa29.51■■■□□ 2.31
ABR-227ENST00000574266 IQGAP2Q13576 1575 aa29.47■■■□□ 2.31
ABR-227ENST00000574266 ABCC10Q5T3U5 1492 aa29.44■■■□□ 2.3
ABR-227ENST00000574266 ADCY10Q96PN6 1610 aa29.44■■■□□ 2.3
ABR-227ENST00000574266 MAPKBP1O60336 1514 aa29.44■■■□□ 2.3
ABR-227ENST00000574266 KIF13AQ9H1H9 1805 aa29.4■■■□□ 2.3
ABR-227ENST00000574266 FAM9AQ8IZU1 332 aaPredicted RBP29.36■■■□□ 2.29
ABR-227ENST00000574266 UACAQ9BZF9 1416 aa29.3■■■□□ 2.28
ABR-227ENST00000574266 ABCC2Q92887 1545 aa29.29■■■□□ 2.28
ABR-227ENST00000574266 DIP2BQ9P265 1576 aa29.28■■■□□ 2.28
ABR-227ENST00000574266 UGGT2Q9NYU1 1516 aa29.27■■■□□ 2.28
ABR-227ENST00000574266 DISP1Q96F81 1524 aa29.26■■■□□ 2.27
ABR-227ENST00000574266 UHRF1BP1LA0JNW5 1464 aa29.24■■■□□ 2.27
ABR-227ENST00000574266 PLB1Q6P1J6 1458 aa29.23■■■□□ 2.27
ABR-227ENST00000574266 GOLGA3Q08378 1498 aa29.21■■■□□ 2.27
ABR-227ENST00000574266 ASXL2Q76L83 1435 aa29.2■■■□□ 2.26
ABR-227ENST00000574266 KIAA0556O60303 1618 aa29.16■■■□□ 2.26
ABR-227ENST00000574266 TSPOAP1O95153 1857 aa29.15■■■□□ 2.26
ABR-227ENST00000574266 CSRNP3Q8WYN3 585 aa29.15■■■□□ 2.26
ABR-227ENST00000574266 PRXQ9BXM0 1461 aa29.14■■■□□ 2.26
ABR-227ENST00000574266 CTTNBP2Q8WZ74 1663 aa29.14■■■□□ 2.26
ABR-227ENST00000574266 KDM6BO15054 1643 aa29.09■■■□□ 2.25
ABR-227ENST00000574266 KDM5BQ9UGL1 1544 aa29.09■■■□□ 2.25
ABR-227ENST00000574266 GLI2P10070 1586 aa29.05■■■□□ 2.24
ABR-227ENST00000574266 EEA1Q15075 1411 aa29.01■■■□□ 2.23
ABR-227ENST00000574266 P3H3Q8IVL6 736 aa29■■■□□ 2.23
ABR-227ENST00000574266 ZCCHC11Q5TAX3 1644 aaKnown RBP28.99■■■□□ 2.23
ABR-227ENST00000574266 EPRSP07814 1512 aaKnown RBP28.99■■■□□ 2.23
ABR-227ENST00000574266 KCNH8Q96L42 1107 aa28.97■■■□□ 2.23
ABR-227ENST00000574266 TEX14Q8IWB6 1497 aa28.95■■■□□ 2.22
ABR-227ENST00000574266 WDR7Q9Y4E6 1490 aa28.92■■■□□ 2.22
ABR-227ENST00000574266 RANGAP1P46060 587 aaPredicted RBP28.89■■■□□ 2.22
ABR-227ENST00000574266 ABCA8O94911 1581 aa28.88■■■□□ 2.21
ABR-227ENST00000574266 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.86■■■□□ 2.21
ABR-227ENST00000574266 HNRNPUL2Q1KMD3 747 aaKnown RBP28.86■■■□□ 2.21
ABR-227ENST00000574266 ARID3CA6NKF2 412 aa28.84■■■□□ 2.21
ABR-227ENST00000574266 MAP3K4Q9Y6R4 1608 aa28.83■■■□□ 2.21
ABR-227ENST00000574266 CD109Q6YHK3 1445 aa28.82■■■□□ 2.2
ABR-227ENST00000574266 PPRC1Q5VV67 1664 aaKnown RBP28.8■■■□□ 2.2
ABR-227ENST00000574266 KDM4FA0A1W2PPD8 638 aa28.75■■■□□ 2.19
ABR-227ENST00000574266 ATP10BO94823 1461 aa28.71■■■□□ 2.19
ABR-227ENST00000574266 CFAP43Q8NDM7 1665 aa28.7■■■□□ 2.19
ABR-227ENST00000574266 UBTFP17480 764 aaKnown RBP28.7■■■□□ 2.18
ABR-227ENST00000574266 SAMD9Q5K651 1589 aa28.7■■■□□ 2.18
ABR-227ENST00000574266 MAGI3Q5TCQ9 1506 aa28.69■■■□□ 2.18
ABR-227ENST00000574266 COL17A1Q9UMD9 1497 aaPredicted RBP28.66■■■□□ 2.18
ABR-227ENST00000574266 RAPGEF6Q8TEU7 1601 aa28.65■■■□□ 2.18
ABR-227ENST00000574266 PLEKHD1A6NEE1 506 aa28.64■■■□□ 2.18
ABR-227ENST00000574266 CHIC1Q5VXU3 224 aa28.64■■■□□ 2.18
ABR-227ENST00000574266 EHMT2Q96KQ7 1210 aa28.64■■■□□ 2.18
ABR-227ENST00000574266 FHOD3Q2V2M9 1422 aa28.61■■■□□ 2.17
ABR-227ENST00000574266 KIF21BO75037 1637 aa28.61■■■□□ 2.17
ABR-227ENST00000574266 PHLDB1Q86UU1 1377 aa28.59■■■□□ 2.17
ABR-227ENST00000574266 EFCAB5A4FU69 1503 aa28.56■■■□□ 2.16
ABR-227ENST00000574266 ADGRL1O94910 1474 aa28.53■■■□□ 2.16
ABR-227ENST00000574266 ATP1B4Q9UN42 357 aaPredicted RBP28.53■■■□□ 2.16
ABR-227ENST00000574266 NUP153P49790 1475 aaKnown RBP28.5■■■□□ 2.15
ABR-227ENST00000574266 ABCA9Q8IUA7 1624 aa28.47■■■□□ 2.15
ABR-227ENST00000574266 ARAP3Q8WWN8 1544 aa28.47■■■□□ 2.15
ABR-227ENST00000574266 CDK11AQ9UQ88 783 aaPredicted RBP28.43■■■□□ 2.14
ABR-227ENST00000574266 NEO1Q92859 1461 aa28.42■■■□□ 2.14
ABR-227ENST00000574266 FMN1Q68DA7 1419 aa28.41■■■□□ 2.14
ABR-227ENST00000574266 RAPGEF3O95398 923 aa28.39■■■□□ 2.14
ABR-227ENST00000574266 ARID4BQ4LE39 1312 aaPredicted RBP28.32■■■□□ 2.12
ABR-227ENST00000574266 AKNAQ7Z591 1439 aa28.27■■■□□ 2.12
ABR-227ENST00000574266 DENND4BO75064 1496 aaPredicted RBP28.27■■■□□ 2.12
ABR-227ENST00000574266 FANCAO15360 1455 aa28.26■■■□□ 2.11
ABR-227ENST00000574266 ARHGAP35Q9NRY4 1499 aa28.26■■■□□ 2.11
ABR-227ENST00000574266 CFAP74Q9C0B2 1584 aa28.24■■■□□ 2.11
ABR-227ENST00000574266 HECW1Q76N89 1606 aa28.24■■■□□ 2.11
ABR-227ENST00000574266 CDK13Q14004 1512 aaKnown RBP28.23■■■□□ 2.11
ABR-227ENST00000574266 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.23■■■□□ 2.11
ABR-227ENST00000574266 EFCAB2Q5VUJ9 269 aa28.2■■■□□ 2.1
ABR-227ENST00000574266 CLIP1P30622 1438 aa28.18■■■□□ 2.1
ABR-227ENST00000574266 PLCH2O75038 1416 aa28.16■■■□□ 2.1
ABR-227ENST00000574266 TTC37Q6PGP7 1564 aa28.13■■■□□ 2.09
ABR-227ENST00000574266 MYT1LQ9UL68 1186 aa28.1■■■□□ 2.09
ABR-227ENST00000574266 POGZQ7Z3K3 1410 aa28.09■■■□□ 2.09
ABR-227ENST00000574266 SCAPERQ9BY12 1400 aa28.09■■■□□ 2.09
ABR-227ENST00000574266 TROQ12816 1431 aaPredicted RBP28.09■■■□□ 2.09
ABR-227ENST00000574266 FRMPD1Q5SYB0 1578 aa28.07■■■□□ 2.08
ABR-227ENST00000574266 MAGI2Q86UL8 1455 aa28.06■■■□□ 2.08
ABR-227ENST00000574266 HECW2Q9P2P5 1572 aa28.06■■■□□ 2.08
ABR-227ENST00000574266 KIF14Q15058 1648 aa28.06■■■□□ 2.08
ABR-227ENST00000574266 RICTORQ6R327 1708 aa28.04■■■□□ 2.08
ABR-227ENST00000574266 CCDC18Q5T9S5 1454 aa28.03■■■□□ 2.08
ABR-227ENST00000574266 CASKIN1Q8WXD9 1431 aa28.03■■■□□ 2.08
ABR-227ENST00000574266 ARHGEF40Q8TER5 1519 aa28.02■■■□□ 2.08
ABR-227ENST00000574266 PTPRMP28827 1452 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms