RNA–Protein interactions for RNA: ENST00000574257.5

ABR-226, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-226ENST00000574257 KIF27Q86VH2 1401 aa20.55■□□□□ 0.88
ABR-226ENST00000574257 RUSC2Q8N2Y8 1516 aa20.51■□□□□ 0.87
ABR-226ENST00000574257 KIAA0586Q9BVV6 1533 aa20.47■□□□□ 0.87
ABR-226ENST00000574257 CARMIL1Q5VZK9 1371 aa20.45■□□□□ 0.86
ABR-226ENST00000574257 CUL7Q14999 1698 aa20.44■□□□□ 0.86
ABR-226ENST00000574257 KIF13AQ9H1H9 1805 aa20.36■□□□□ 0.85
ABR-226ENST00000574257 NPM1P06748 294 aaKnown RBP eCLIP20.35■□□□□ 0.85
ABR-226ENST00000574257 ADCY10Q96PN6 1610 aa20.33■□□□□ 0.84
ABR-226ENST00000574257 FAM69CQ0P6D2 419 aa20.32■□□□□ 0.84
ABR-226ENST00000574257 TTBK1Q5TCY1 1321 aaPredicted RBP20.3■□□□□ 0.84
ABR-226ENST00000574257 PTPRGP23470 1445 aa20.29■□□□□ 0.84
ABR-226ENST00000574257 ABCC10Q5T3U5 1492 aa20.28■□□□□ 0.84
ABR-226ENST00000574257 MAPKBP1O60336 1514 aa20.27■□□□□ 0.83
ABR-226ENST00000574257 TNIKQ9UKE5 1360 aa20.24■□□□□ 0.83
ABR-226ENST00000574257 IQGAP2Q13576 1575 aa20.23■□□□□ 0.83
ABR-226ENST00000574257 CARMIL2Q6F5E8 1435 aa20.23■□□□□ 0.83
ABR-226ENST00000574257 RAPGEF2Q9Y4G8 1499 aa20.23■□□□□ 0.83
ABR-226ENST00000574257 DIP2BQ9P265 1576 aa20.21■□□□□ 0.83
ABR-226ENST00000574257 DISP1Q96F81 1524 aa20.2■□□□□ 0.82
ABR-226ENST00000574257 ABCC2Q92887 1545 aa20.14■□□□□ 0.81
ABR-226ENST00000574257 UGGT2Q9NYU1 1516 aa20.13■□□□□ 0.81
ABR-226ENST00000574257 UACAQ9BZF9 1416 aa20.12■□□□□ 0.81
ABR-226ENST00000574257 UHRF1BP1LA0JNW5 1464 aa20.11■□□□□ 0.81
ABR-226ENST00000574257 TSPOAP1O95153 1857 aa20.11■□□□□ 0.81
ABR-226ENST00000574257 ASXL2Q76L83 1435 aa20.1■□□□□ 0.81
ABR-226ENST00000574257 KIAA0556O60303 1618 aa20.05■□□□□ 0.8
ABR-226ENST00000574257 PRXQ9BXM0 1461 aa20.05■□□□□ 0.8
ABR-226ENST00000574257 PLB1Q6P1J6 1458 aa20.05■□□□□ 0.8
ABR-226ENST00000574257 ILDR1Q86SU0 546 aaPredicted RBP20.04■□□□□ 0.8
ABR-226ENST00000574257 KDM5BQ9UGL1 1544 aa20.03■□□□□ 0.8
ABR-226ENST00000574257 CTTNBP2Q8WZ74 1663 aa20■□□□□ 0.79
ABR-226ENST00000574257 GLI2P10070 1586 aa20■□□□□ 0.79
ABR-226ENST00000574257 KDM6BO15054 1643 aa19.99■□□□□ 0.79
ABR-226ENST00000574257 PPRC1Q5VV67 1664 aaKnown RBP19.97■□□□□ 0.79
ABR-226ENST00000574257 ZCCHC11Q5TAX3 1644 aaKnown RBP19.96■□□□□ 0.79
ABR-226ENST00000574257 CSRNP3Q8WYN3 585 aa19.96■□□□□ 0.79
ABR-226ENST00000574257 EPRSP07814 1512 aaKnown RBP19.96■□□□□ 0.79
ABR-226ENST00000574257 GOLGA3Q08378 1498 aa19.94■□□□□ 0.78
ABR-226ENST00000574257 KDM4FA0A1W2PPD8 638 aa19.92■□□□□ 0.78
ABR-226ENST00000574257 P3H3Q8IVL6 736 aa19.92■□□□□ 0.78
ABR-226ENST00000574257 COL17A1Q9UMD9 1497 aaPredicted RBP19.9■□□□□ 0.78
ABR-226ENST00000574257 ABCA8O94911 1581 aa19.9■□□□□ 0.78
ABR-226ENST00000574257 MAP3K4Q9Y6R4 1608 aa19.88■□□□□ 0.77
ABR-226ENST00000574257 WDR7Q9Y4E6 1490 aa19.87■□□□□ 0.77
ABR-226ENST00000574257 KCNH8Q96L42 1107 aa19.87■□□□□ 0.77
ABR-226ENST00000574257 ARID3CA6NKF2 412 aa19.83■□□□□ 0.77
ABR-226ENST00000574257 FAM9AQ8IZU1 332 aaPredicted RBP19.82■□□□□ 0.76
ABR-226ENST00000574257 ATP10BO94823 1461 aa19.79■□□□□ 0.76
ABR-226ENST00000574257 TEX14Q8IWB6 1497 aa19.79■□□□□ 0.76
ABR-226ENST00000574257 CD109Q6YHK3 1445 aa19.78■□□□□ 0.76
ABR-226ENST00000574257 RANGAP1P46060 587 aaPredicted RBP19.77■□□□□ 0.76
ABR-226ENST00000574257 EEA1Q15075 1411 aa19.76■□□□□ 0.75
ABR-226ENST00000574257 SAMD9Q5K651 1589 aa19.75■□□□□ 0.75
ABR-226ENST00000574257 MAGI3Q5TCQ9 1506 aa19.74■□□□□ 0.75
ABR-226ENST00000574257 CFAP43Q8NDM7 1665 aa19.71■□□□□ 0.75
ABR-226ENST00000574257 FHOD3Q2V2M9 1422 aa19.68■□□□□ 0.74
ABR-226ENST00000574257 ADGRL1O94910 1474 aa19.67■□□□□ 0.74
ABR-226ENST00000574257 CHIC1Q5VXU3 224 aa19.67■□□□□ 0.74
ABR-226ENST00000574257 RAPGEF6Q8TEU7 1601 aa19.66■□□□□ 0.74
ABR-226ENST00000574257 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.65■□□□□ 0.74
ABR-226ENST00000574257 HNRNPUL2Q1KMD3 747 aaKnown RBP19.65■□□□□ 0.74
ABR-226ENST00000574257 NUP153P49790 1475 aaKnown RBP19.64■□□□□ 0.73
ABR-226ENST00000574257 EHMT2Q96KQ7 1210 aa19.63■□□□□ 0.73
ABR-226ENST00000574257 KIF21BO75037 1637 aa19.61■□□□□ 0.73
ABR-226ENST00000574257 ABCA9Q8IUA7 1624 aa19.59■□□□□ 0.73
ABR-226ENST00000574257 ARAP3Q8WWN8 1544 aa19.59■□□□□ 0.73
ABR-226ENST00000574257 PLEKHD1A6NEE1 506 aa19.56■□□□□ 0.72
ABR-226ENST00000574257 RAPGEF3O95398 923 aa19.56■□□□□ 0.72
ABR-226ENST00000574257 UBTFP17480 764 aaKnown RBP19.56■□□□□ 0.72
ABR-226ENST00000574257 PHLDB1Q86UU1 1377 aa19.54■□□□□ 0.72
ABR-226ENST00000574257 EFCAB5A4FU69 1503 aa19.52■□□□□ 0.72
ABR-226ENST00000574257 NEO1Q92859 1461 aa19.5■□□□□ 0.71
ABR-226ENST00000574257 CDK13Q14004 1512 aaKnown RBP19.46■□□□□ 0.71
ABR-226ENST00000574257 ARHGAP35Q9NRY4 1499 aa19.45■□□□□ 0.7
ABR-226ENST00000574257 ATP1B4Q9UN42 357 aaPredicted RBP19.44■□□□□ 0.7
ABR-226ENST00000574257 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.44■□□□□ 0.7
ABR-226ENST00000574257 FRMPD1Q5SYB0 1578 aa19.42■□□□□ 0.7
ABR-226ENST00000574257 AKNAQ7Z591 1439 aa19.42■□□□□ 0.7
ABR-226ENST00000574257 TTC37Q6PGP7 1564 aa19.4■□□□□ 0.7
ABR-226ENST00000574257 FMN1Q68DA7 1419 aa19.39■□□□□ 0.69
ABR-226ENST00000574257 FANCAO15360 1455 aa19.38■□□□□ 0.69
ABR-226ENST00000574257 DENND4BO75064 1496 aaPredicted RBP19.38■□□□□ 0.69
ABR-226ENST00000574257 HECW2Q9P2P5 1572 aa19.37■□□□□ 0.69
ABR-226ENST00000574257 RICTORQ6R327 1708 aa19.34■□□□□ 0.69
ABR-226ENST00000574257 ADAMTSL3P82987 1691 aa19.34■□□□□ 0.69
ABR-226ENST00000574257 ARID4BQ4LE39 1312 aaPredicted RBP19.34■□□□□ 0.69
ABR-226ENST00000574257 PLCH2O75038 1416 aa19.34■□□□□ 0.69
ABR-226ENST00000574257 CDK11AQ9UQ88 783 aaPredicted RBP19.32■□□□□ 0.68
ABR-226ENST00000574257 HECW1Q76N89 1606 aa19.32■□□□□ 0.68
ABR-226ENST00000574257 PTPRMP28827 1452 aa19.3■□□□□ 0.68
ABR-226ENST00000574257 SCAPERQ9BY12 1400 aa19.3■□□□□ 0.68
ABR-226ENST00000574257 BCORL1Q5H9F3 1711 aa19.29■□□□□ 0.68
ABR-226ENST00000574257 CFAP74Q9C0B2 1584 aa19.29■□□□□ 0.68
ABR-226ENST00000574257 YEATS2Q9ULM3 1422 aa19.28■□□□□ 0.68
ABR-226ENST00000574257 EFCAB2Q5VUJ9 269 aa19.28■□□□□ 0.68
ABR-226ENST00000574257 LRRIQ1Q96JM4 1722 aa19.28■□□□□ 0.68
ABR-226ENST00000574257 TROQ12816 1431 aaPredicted RBP19.26■□□□□ 0.67
ABR-226ENST00000574257 ARHGEF40Q8TER5 1519 aa19.26■□□□□ 0.67
ABR-226ENST00000574257 KIF14Q15058 1648 aa19.26■□□□□ 0.67
ABR-226ENST00000574257 FBXO41Q8TF61 875 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms