RNA–Protein interactions for RNA: ENST00000574217.1

PRPF8-210, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 310 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-210ENST00000574217 RIMBP3BA6NNM3 1639 aa11.04□□□□□ -0.64
PRPF8-210ENST00000574217 RIMBP3Q9UFD9 1639 aa11.04□□□□□ -0.64
PRPF8-210ENST00000574217 PRXQ9BXM0 1461 aa11.03□□□□□ -0.64
PRPF8-210ENST00000574217 ARHGEF11O15085 1522 aa11.02□□□□□ -0.65
PRPF8-210ENST00000574217 SHROOM2Q13796 1616 aa11□□□□□ -0.65
PRPF8-210ENST00000574217 SENP3Q9H4L4 574 aaPredicted RBP11□□□□□ -0.65
PRPF8-210ENST00000574217 KIAA0586Q9BVV6 1533 aa10.99□□□□□ -0.65
PRPF8-210ENST00000574217 ERCC6L2Q5T890 1561 aa10.98□□□□□ -0.65
PRPF8-210ENST00000574217 CTTNBP2Q8WZ74 1663 aa10.98□□□□□ -0.65
PRPF8-210ENST00000574217 KIF21BO75037 1637 aa10.96□□□□□ -0.65
PRPF8-210ENST00000574217 JPH4Q96JJ6 628 aa10.96□□□□□ -0.65
PRPF8-210ENST00000574217 IQGAP2Q13576 1575 aa10.95□□□□□ -0.66
PRPF8-210ENST00000574217 ARAP1Q96P48 1450 aa10.95□□□□□ -0.66
PRPF8-210ENST00000574217 PRG4Q92954 1404 aaPredicted RBP10.94□□□□□ -0.66
PRPF8-210ENST00000574217 GOLGA3Q08378 1498 aa10.93□□□□□ -0.66
PRPF8-210ENST00000574217 CYB5RLQ6IPT4 315 aa10.91□□□□□ -0.66
PRPF8-210ENST00000574217 EHMT2Q96KQ7 1210 aa10.91□□□□□ -0.66
PRPF8-210ENST00000574217 UGGT2Q9NYU1 1516 aa10.89□□□□□ -0.67
PRPF8-210ENST00000574217 UBTFP17480 764 aaKnown RBP10.87□□□□□ -0.67
PRPF8-210ENST00000574217 DISP1Q96F81 1524 aa10.87□□□□□ -0.67
PRPF8-210ENST00000574217 CARMIL2Q6F5E8 1435 aa10.86□□□□□ -0.67
PRPF8-210ENST00000574217 LOC105371045A0A1W2PR82 267 aa10.86□□□□□ -0.67
PRPF8-210ENST00000574217 KIAA0556O60303 1618 aa10.86□□□□□ -0.67
PRPF8-210ENST00000574217 TNIKQ9UKE5 1360 aa10.83□□□□□ -0.68
PRPF8-210ENST00000574217 TTBK1Q5TCY1 1321 aaPredicted RBP10.83□□□□□ -0.68
PRPF8-210ENST00000574217 RANGAP1P46060 587 aaPredicted RBP10.82□□□□□ -0.68
PRPF8-210ENST00000574217 SAMD9Q5K651 1589 aa10.82□□□□□ -0.68
PRPF8-210ENST00000574217 PTPRGP23470 1445 aa10.81□□□□□ -0.68
PRPF8-210ENST00000574217 P3H3Q8IVL6 736 aa10.8□□□□□ -0.68
PRPF8-210ENST00000574217 ADCY10Q96PN6 1610 aa10.79□□□□□ -0.68
PRPF8-210ENST00000574217 EFCAB5A4FU69 1503 aa10.76□□□□□ -0.69
PRPF8-210ENST00000574217 FHOD3Q2V2M9 1422 aa10.75□□□□□ -0.69
PRPF8-210ENST00000574217 CEP162Q5TB80 1403 aa10.75□□□□□ -0.69
PRPF8-210ENST00000574217 UACAQ9BZF9 1416 aa10.75□□□□□ -0.69
PRPF8-210ENST00000574217 CLIP1P30622 1438 aa10.74□□□□□ -0.69
PRPF8-210ENST00000574217 UHRF1BP1LA0JNW5 1464 aa10.74□□□□□ -0.69
PRPF8-210ENST00000574217 PLB1Q6P1J6 1458 aa10.74□□□□□ -0.69
PRPF8-210ENST00000574217 ARHGAP35Q9NRY4 1499 aa10.74□□□□□ -0.69
PRPF8-210ENST00000574217 ABCC2Q92887 1545 aa10.74□□□□□ -0.69
PRPF8-210ENST00000574217 ABCA8O94911 1581 aa10.73□□□□□ -0.69
PRPF8-210ENST00000574217 RAPGEF6Q8TEU7 1601 aa10.7□□□□□ -0.7
PRPF8-210ENST00000574217 NPM1P06748 294 aaKnown RBP eCLIP10.7□□□□□ -0.7
PRPF8-210ENST00000574217 ZCCHC11Q5TAX3 1644 aaKnown RBP10.69□□□□□ -0.7
PRPF8-210ENST00000574217 KDM5BQ9UGL1 1544 aa10.68□□□□□ -0.7
PRPF8-210ENST00000574217 MAPKBP1O60336 1514 aa10.68□□□□□ -0.7
PRPF8-210ENST00000574217 TRHP20396 242 aaPredicted RBP10.66□□□□□ -0.7
PRPF8-210ENST00000574217 KIF13AQ9H1H9 1805 aa10.65□□□□□ -0.7
PRPF8-210ENST00000574217 ARID3CA6NKF2 412 aa10.65□□□□□ -0.7
PRPF8-210ENST00000574217 NUP153P49790 1475 aaKnown RBP10.65□□□□□ -0.7
PRPF8-210ENST00000574217 FMN1Q68DA7 1419 aa10.65□□□□□ -0.7
PRPF8-210ENST00000574217 ATP10BO94823 1461 aa10.64□□□□□ -0.71
PRPF8-210ENST00000574217 ASXL2Q76L83 1435 aa10.64□□□□□ -0.71
PRPF8-210ENST00000574217 PCF11O94913 1555 aaKnown RBP10.62□□□□□ -0.71
PRPF8-210ENST00000574217 DIP2BQ9P265 1576 aa10.62□□□□□ -0.71
PRPF8-210ENST00000574217 HECW1Q76N89 1606 aa10.62□□□□□ -0.71
PRPF8-210ENST00000574217 ABCC10Q5T3U5 1492 aa10.61□□□□□ -0.71
PRPF8-210ENST00000574217 LRRIQ1Q96JM4 1722 aa10.61□□□□□ -0.71
PRPF8-210ENST00000574217 ATP1B4Q9UN42 357 aaPredicted RBP10.61□□□□□ -0.71
PRPF8-210ENST00000574217 VPS8Q8N3P4 1428 aa10.6□□□□□ -0.71
PRPF8-210ENST00000574217 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.6□□□□□ -0.71
PRPF8-210ENST00000574217 HNRNPUL2Q1KMD3 747 aaKnown RBP10.6□□□□□ -0.71
PRPF8-210ENST00000574217 CASKIN1Q8WXD9 1431 aa10.59□□□□□ -0.71
PRPF8-210ENST00000574217 CDK13Q14004 1512 aaKnown RBP10.59□□□□□ -0.71
PRPF8-210ENST00000574217 FAM69CQ0P6D2 419 aa10.59□□□□□ -0.71
PRPF8-210ENST00000574217 WDR7Q9Y4E6 1490 aa10.59□□□□□ -0.71
PRPF8-210ENST00000574217 EPRSP07814 1512 aaKnown RBP10.58□□□□□ -0.72
PRPF8-210ENST00000574217 FYCO1Q9BQS8 1478 aa10.57□□□□□ -0.72
PRPF8-210ENST00000574217 TSPOAP1O95153 1857 aa10.57□□□□□ -0.72
PRPF8-210ENST00000574217 GLI2P10070 1586 aa10.56□□□□□ -0.72
PRPF8-210ENST00000574217 KCNH8Q96L42 1107 aa10.56□□□□□ -0.72
PRPF8-210ENST00000574217 MAP3K4Q9Y6R4 1608 aa10.54□□□□□ -0.72
PRPF8-210ENST00000574217 CCDC18Q5T9S5 1454 aa10.54□□□□□ -0.72
PRPF8-210ENST00000574217 PLEKHD1A6NEE1 506 aa10.53□□□□□ -0.72
PRPF8-210ENST00000574217 PPRC1Q5VV67 1664 aaKnown RBP10.53□□□□□ -0.72
PRPF8-210ENST00000574217 CFAP43Q8NDM7 1665 aa10.52□□□□□ -0.73
PRPF8-210ENST00000574217 ABCA9Q8IUA7 1624 aa10.51□□□□□ -0.73
PRPF8-210ENST00000574217 MAGI3Q5TCQ9 1506 aa10.5□□□□□ -0.73
PRPF8-210ENST00000574217 APLP2Q06481 763 aa10.5□□□□□ -0.73
PRPF8-210ENST00000574217 CDK11AQ9UQ88 783 aaPredicted RBP10.5□□□□□ -0.73
PRPF8-210ENST00000574217 KIF14Q15058 1648 aa10.49□□□□□ -0.73
PRPF8-210ENST00000574217 TROQ12816 1431 aaPredicted RBP10.49□□□□□ -0.73
PRPF8-210ENST00000574217 CD109Q6YHK3 1445 aa10.49□□□□□ -0.73
PRPF8-210ENST00000574217 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.48□□□□□ -0.73
PRPF8-210ENST00000574217 TTC37Q6PGP7 1564 aa10.48□□□□□ -0.73
PRPF8-210ENST00000574217 MAP3K1Q13233 1512 aa10.47□□□□□ -0.73
PRPF8-210ENST00000574217 TIAM1Q13009 1591 aa10.47□□□□□ -0.73
PRPF8-210ENST00000574217 TEX14Q8IWB6 1497 aa10.45□□□□□ -0.74
PRPF8-210ENST00000574217 MYO5CQ9NQX4 1742 aa10.44□□□□□ -0.74
PRPF8-210ENST00000574217 EHBP1L1Q8N3D4 1523 aa10.43□□□□□ -0.74
PRPF8-210ENST00000574217 MTUS2Q5JR59 1369 aa10.43□□□□□ -0.74
PRPF8-210ENST00000574217 KDM6BO15054 1643 aa10.43□□□□□ -0.74
PRPF8-210ENST00000574217 LRRC9Q6ZRR7 1453 aa10.42□□□□□ -0.74
PRPF8-210ENST00000574217 CDC42BPAQ5VT25 1732 aa10.41□□□□□ -0.74
PRPF8-210ENST00000574217 CDC42BPBQ9Y5S2 1711 aa10.41□□□□□ -0.74
PRPF8-210ENST00000574217 PLPPR3Q6T4P5 718 aa10.41□□□□□ -0.74
PRPF8-210ENST00000574217 PLCH2O75038 1416 aa10.41□□□□□ -0.74
PRPF8-210ENST00000574217 KANK4Q5T7N3 995 aaPredicted RBP10.4□□□□□ -0.74
PRPF8-210ENST00000574217 SUPT6HQ7KZ85 1726 aaKnown RBP10.4□□□□□ -0.74
PRPF8-210ENST00000574217 COL17A1Q9UMD9 1497 aaPredicted RBP10.4□□□□□ -0.74
PRPF8-210ENST00000574217 PREX2Q70Z35 1606 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms