RNA–Protein interactions for RNA: ENST00000574217.1

PRPF8-210, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 310 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-210ENST00000574217 NISCHQ9Y2I1 1504 aa15.93■□□□□ 0.14
PRPF8-210ENST00000574217 CCDC180Q9P1Z9 1646 aa14.13□□□□□ -0.15
PRPF8-210ENST00000574217 ABCC9O60706 1549 aa13.74□□□□□ -0.21
PRPF8-210ENST00000574217 ZCCHC6Q5VYS8 1495 aaKnown RBP13.29□□□□□ -0.28
PRPF8-210ENST00000574217 DCAF8L2P0C7V8 631 aa13.27□□□□□ -0.29
PRPF8-210ENST00000574217 NACADO15069 1562 aa13.24□□□□□ -0.29
PRPF8-210ENST00000574217 RB1CC1Q8TDY2 1594 aa13.24□□□□□ -0.29
PRPF8-210ENST00000574217 MYO15BQ96JP2 1530 aa13.18□□□□□ -0.3
PRPF8-210ENST00000574217 DCAF1Q9Y4B6 1507 aa13.17□□□□□ -0.3
PRPF8-210ENST00000574217 AEBP2Q6ZN18 517 aaPredicted RBP13.12□□□□□ -0.31
PRPF8-210ENST00000574217 UNC13AQ9UPW8 1703 aa13.01□□□□□ -0.33
PRPF8-210ENST00000574217 SCRIBQ14160 1630 aa12.91□□□□□ -0.34
PRPF8-210ENST00000574217 BICRAQ9NZM4 1560 aa12.86□□□□□ -0.35
PRPF8-210ENST00000574217 PABPN1Q86U42 306 aaKnown RBP eCLIP12.86□□□□□ -0.35
PRPF8-210ENST00000574217 CHIC1Q5VXU3 224 aa12.82□□□□□ -0.36
PRPF8-210ENST00000574217 SHROOM4Q9ULL8 1493 aa12.68□□□□□ -0.38
PRPF8-210ENST00000574217 DNAJC5BQ9UF47 199 aa12.54□□□□□ -0.4
PRPF8-210ENST00000574217 EIF4G1Q04637 1599 aaKnown RBP12.51□□□□□ -0.41
PRPF8-210ENST00000574217 CC2D2AQ9P2K1 1620 aa12.44□□□□□ -0.42
PRPF8-210ENST00000574217 CECR2Q9BXF3 1484 aa12.41□□□□□ -0.42
PRPF8-210ENST00000574217 SMARCA4P51532 1647 aa12.35□□□□□ -0.43
PRPF8-210ENST00000574217 BAZ1AQ9NRL2 1556 aaPredicted RBP12.34□□□□□ -0.43
PRPF8-210ENST00000574217 MROH2BQ7Z745 1585 aa12.3□□□□□ -0.44
PRPF8-210ENST00000574217 ATAD2BQ9ULI0 1458 aa12.25□□□□□ -0.45
PRPF8-210ENST00000574217 SMARCA2P51531 1590 aa12.22□□□□□ -0.45
PRPF8-210ENST00000574217 PEG3Q9GZU2 1588 aa12.22□□□□□ -0.45
PRPF8-210ENST00000574217 NCAPD3P42695 1498 aa12.21□□□□□ -0.45
PRPF8-210ENST00000574217 WIZO95785 1651 aa12.19□□□□□ -0.46
PRPF8-210ENST00000574217 HMGXB3Q12766 1538 aa12.17□□□□□ -0.46
PRPF8-210ENST00000574217 RSF1Q96T23 1441 aaPredicted RBP12.17□□□□□ -0.46
PRPF8-210ENST00000574217 BAZ1BQ9UIG0 1483 aaKnown RBP12.15□□□□□ -0.46
PRPF8-210ENST00000574217 TOP2AP11388 1531 aaKnown RBP12.03□□□□□ -0.48
PRPF8-210ENST00000574217 SUPT5HO00267 1087 aaKnown RBP11.99□□□□□ -0.49
PRPF8-210ENST00000574217 NESP48681 1621 aa11.93□□□□□ -0.5
PRPF8-210ENST00000574217 CCDC88BA6NC98 1476 aa11.89□□□□□ -0.51
PRPF8-210ENST00000574217 LAMC3Q9Y6N6 1575 aa11.89□□□□□ -0.51
PRPF8-210ENST00000574217 CADPSQ9ULU8 1353 aa11.87□□□□□ -0.51
PRPF8-210ENST00000574217 CFTRP13569 1480 aa11.82□□□□□ -0.52
PRPF8-210ENST00000574217 ERCC6Q03468 1493 aa11.82□□□□□ -0.52
PRPF8-210ENST00000574217 KIF21AQ7Z4S6 1674 aa11.81□□□□□ -0.52
PRPF8-210ENST00000574217 PRDM2Q13029 1718 aa11.79□□□□□ -0.52
PRPF8-210ENST00000574217 PDS5BQ9NTI5 1447 aa11.78□□□□□ -0.52
PRPF8-210ENST00000574217 FANCD2Q9BXW9 1451 aa11.74□□□□□ -0.53
PRPF8-210ENST00000574217 THOC2Q8NI27 1593 aaKnown RBP11.73□□□□□ -0.53
PRPF8-210ENST00000574217 CEP164Q9UPV0 1460 aa11.71□□□□□ -0.53
PRPF8-210ENST00000574217 MRC2Q9UBG0 1479 aa11.68□□□□□ -0.54
PRPF8-210ENST00000574217 CUX2O14529 1486 aa11.65□□□□□ -0.54
PRPF8-210ENST00000574217 WDR62O43379 1518 aa11.65□□□□□ -0.55
PRPF8-210ENST00000574217 URB2Q14146 1524 aaKnown RBP11.63□□□□□ -0.55
PRPF8-210ENST00000574217 TOPBP1Q92547 1522 aa11.57□□□□□ -0.56
PRPF8-210ENST00000574217 DNMBPQ6XZF7 1577 aa11.57□□□□□ -0.56
PRPF8-210ENST00000574217 ABCC8Q09428 1581 aa11.54□□□□□ -0.56
PRPF8-210ENST00000574217 CUX1P39880 1505 aa11.52□□□□□ -0.57
PRPF8-210ENST00000574217 POLA1P09884 1462 aaPredicted RBP11.47□□□□□ -0.57
PRPF8-210ENST00000574217 SYNJ1O43426 1573 aa11.46□□□□□ -0.57
PRPF8-210ENST00000574217 FGD5Q6ZNL6 1462 aa11.46□□□□□ -0.57
PRPF8-210ENST00000574217 IFT140Q96RY7 1462 aa11.46□□□□□ -0.57
PRPF8-210ENST00000574217 WRNQ14191 1432 aaPredicted RBP eCLIP11.46□□□□□ -0.57
PRPF8-210ENST00000574217 BIVM-ERCC5R4GMW8 1640 aa11.46□□□□□ -0.58
PRPF8-210ENST00000574217 TOP2BQ02880 1626 aa11.45□□□□□ -0.58
PRPF8-210ENST00000574217 TARBP1Q13395 1621 aaKnown RBP11.45□□□□□ -0.58
PRPF8-210ENST00000574217 RAD54L2Q9Y4B4 1467 aa11.44□□□□□ -0.58
PRPF8-210ENST00000574217 ZNF608Q9ULD9 1512 aaPredicted RBP11.42□□□□□ -0.58
PRPF8-210ENST00000574217 SOGA1O94964 1423 aa11.42□□□□□ -0.58
PRPF8-210ENST00000574217 WDR97A6NE52 1622 aa11.39□□□□□ -0.59
PRPF8-210ENST00000574217 EIF4G3O43432 1585 aaKnown RBP11.39□□□□□ -0.59
PRPF8-210ENST00000574217 AQRO60306 1485 aaKnown RBP eCLIP11.37□□□□□ -0.592e-6■■■□□ 18.3
PRPF8-210ENST00000574217 PHF23Q9BUL5 403 aaPredicted RBP11.36□□□□□ -0.59
PRPF8-210ENST00000574217 TDRD9Q8NDG6 1382 aaKnown RBP11.35□□□□□ -0.59
PRPF8-210ENST00000574217 ABCA10Q8WWZ4 1543 aa11.35□□□□□ -0.59
PRPF8-210ENST00000574217 ABCA5Q8WWZ7 1642 aa11.31□□□□□ -0.6
PRPF8-210ENST00000574217 TRIM41Q8WV44 630 aa11.31□□□□□ -0.6
PRPF8-210ENST00000574217 PBRM1Q86U86 1689 aa11.3□□□□□ -0.6
PRPF8-210ENST00000574217 GAPVD1Q14C86 1478 aa11.29□□□□□ -0.6
PRPF8-210ENST00000574217 GRIN2BQ13224 1484 aa11.27□□□□□ -0.6
PRPF8-210ENST00000574217 SNAPC4Q5SXM2 1469 aa11.26□□□□□ -0.61
PRPF8-210ENST00000574217 CHD1O14646 1710 aa11.25□□□□□ -0.61
PRPF8-210ENST00000574217 MAGI1Q96QZ7 1491 aaPredicted RBP11.23□□□□□ -0.61
PRPF8-210ENST00000574217 ERICH3Q5RHP9 1530 aa11.21□□□□□ -0.61
PRPF8-210ENST00000574217 KIF27Q86VH2 1401 aa11.21□□□□□ -0.61
PRPF8-210ENST00000574217 FBLN2P98095 1184 aa11.2□□□□□ -0.62
PRPF8-210ENST00000574217 ADAMTS12P58397 1594 aa11.2□□□□□ -0.62
PRPF8-210ENST00000574217 DNAJC5Q9H3Z4 198 aa11.19□□□□□ -0.62
PRPF8-210ENST00000574217 SYNJ2O15056 1496 aa11.19□□□□□ -0.62
PRPF8-210ENST00000574217 OSCARQ8IYS5 282 aa11.18□□□□□ -0.62
PRPF8-210ENST00000574217 RUSC2Q8N2Y8 1516 aa11.18□□□□□ -0.62
PRPF8-210ENST00000574217 CHMP7Q8WUX9 453 aaPredicted RBP11.17□□□□□ -0.62
PRPF8-210ENST00000574217 FHAD1B1AJZ9 1412 aa11.16□□□□□ -0.62
PRPF8-210ENST00000574217 IGF1RP08069 1367 aa11.16□□□□□ -0.62
PRPF8-210ENST00000574217 CUL7Q14999 1698 aa11.14□□□□□ -0.63
PRPF8-210ENST00000574217 GRIN2AQ12879 1464 aa11.13□□□□□ -0.63
PRPF8-210ENST00000574217 EEA1Q15075 1411 aa11.11□□□□□ -0.63
PRPF8-210ENST00000574217 CARMIL1Q5VZK9 1371 aa11.1□□□□□ -0.63
PRPF8-210ENST00000574217 CEP170Q5SW79 1584 aa11.1□□□□□ -0.63
PRPF8-210ENST00000574217 CLASP1Q7Z460 1538 aa11.09□□□□□ -0.63
PRPF8-210ENST00000574217 NUP160Q12769 1436 aa11.08□□□□□ -0.64
PRPF8-210ENST00000574217 FAM9AQ8IZU1 332 aaPredicted RBP11.07□□□□□ -0.64
PRPF8-210ENST00000574217 RAPGEF2Q9Y4G8 1499 aa11.05□□□□□ -0.64
PRPF8-210ENST00000574217 CSRNP3Q8WYN3 585 aa11.04□□□□□ -0.64
PRPF8-210ENST00000574217 RIMBP3CA6NJZ7 1639 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms