RNA–Protein interactions for RNA: ENST00000574158.1

POLR2A-203, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 461 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-203ENST00000574158 KIAA0586Q9BVV6 1533 aa24.03■■□□□ 1.44
POLR2A-203ENST00000574158 PRG4Q92954 1404 aaPredicted RBP24.02■■□□□ 1.44
POLR2A-203ENST00000574158 JPH4Q96JJ6 628 aa23.97■■□□□ 1.43
POLR2A-203ENST00000574158 RAPGEF2Q9Y4G8 1499 aa23.93■■□□□ 1.42
POLR2A-203ENST00000574158 IQGAP2Q13576 1575 aa23.91■■□□□ 1.42
POLR2A-203ENST00000574158 CTTNBP2Q8WZ74 1663 aa23.83■■□□□ 1.4
POLR2A-203ENST00000574158 PRXQ9BXM0 1461 aa23.82■■□□□ 1.4
POLR2A-203ENST00000574158 ADCY10Q96PN6 1610 aa23.79■■□□□ 1.4
POLR2A-203ENST00000574158 TRHP20396 242 aaPredicted RBP23.77■■□□□ 1.4
POLR2A-203ENST00000574158 UGGT2Q9NYU1 1516 aa23.77■■□□□ 1.4
POLR2A-203ENST00000574158 DISP1Q96F81 1524 aa23.75■■□□□ 1.39
POLR2A-203ENST00000574158 CARMIL2Q6F5E8 1435 aa23.73■■□□□ 1.39
POLR2A-203ENST00000574158 KIAA0556O60303 1618 aa23.71■■□□□ 1.39
POLR2A-203ENST00000574158 EEA1Q15075 1411 aa23.69■■□□□ 1.38
POLR2A-203ENST00000574158 TNIKQ9UKE5 1360 aa23.69■■□□□ 1.38
POLR2A-203ENST00000574158 PTPRGP23470 1445 aa23.67■■□□□ 1.38
POLR2A-203ENST00000574158 KIF13AQ9H1H9 1805 aa23.67■■□□□ 1.38
POLR2A-203ENST00000574158 MAPKBP1O60336 1514 aa23.66■■□□□ 1.38
POLR2A-203ENST00000574158 CSRNP3Q8WYN3 585 aa23.61■■□□□ 1.37
POLR2A-203ENST00000574158 UHRF1BP1LA0JNW5 1464 aa23.58■■□□□ 1.37
POLR2A-203ENST00000574158 CHIC1Q5VXU3 224 aa23.57■■□□□ 1.36
POLR2A-203ENST00000574158 ABCC2Q92887 1545 aa23.57■■□□□ 1.36
POLR2A-203ENST00000574158 GOLGA3Q08378 1498 aa23.56■■□□□ 1.36
POLR2A-203ENST00000574158 DIP2BQ9P265 1576 aa23.56■■□□□ 1.36
POLR2A-203ENST00000574158 KIF21BO75037 1637 aa23.55■■□□□ 1.36
POLR2A-203ENST00000574158 UACAQ9BZF9 1416 aa23.54■■□□□ 1.36
POLR2A-203ENST00000574158 ABCC10Q5T3U5 1492 aa23.54■■□□□ 1.36
POLR2A-203ENST00000574158 TTBK1Q5TCY1 1321 aaPredicted RBP23.53■■□□□ 1.36
POLR2A-203ENST00000574158 NPM1P06748 294 aaKnown RBP eCLIP23.51■■□□□ 1.35
POLR2A-203ENST00000574158 SAMD9Q5K651 1589 aa23.49■■□□□ 1.35
POLR2A-203ENST00000574158 KDM5BQ9UGL1 1544 aa23.47■■□□□ 1.35
POLR2A-203ENST00000574158 ABCA8O94911 1581 aa23.46■■□□□ 1.35
POLR2A-203ENST00000574158 ZCCHC11Q5TAX3 1644 aaKnown RBP23.46■■□□□ 1.35
POLR2A-203ENST00000574158 FAM9AQ8IZU1 332 aaPredicted RBP23.45■■□□□ 1.34
POLR2A-203ENST00000574158 PLB1Q6P1J6 1458 aa23.44■■□□□ 1.34
POLR2A-203ENST00000574158 ASXL2Q76L83 1435 aa23.42■■□□□ 1.34
POLR2A-203ENST00000574158 FAM69CQ0P6D2 419 aa23.38■■□□□ 1.33
POLR2A-203ENST00000574158 GLI2P10070 1586 aa23.35■■□□□ 1.33
POLR2A-203ENST00000574158 TSPOAP1O95153 1857 aa23.34■■□□□ 1.33
POLR2A-203ENST00000574158 EFCAB5A4FU69 1503 aa23.31■■□□□ 1.32
POLR2A-203ENST00000574158 PPRC1Q5VV67 1664 aaKnown RBP23.31■■□□□ 1.32
POLR2A-203ENST00000574158 EPRSP07814 1512 aaKnown RBP23.3■■□□□ 1.32
POLR2A-203ENST00000574158 P3H3Q8IVL6 736 aa23.28■■□□□ 1.32
POLR2A-203ENST00000574158 RAPGEF6Q8TEU7 1601 aa23.28■■□□□ 1.32
POLR2A-203ENST00000574158 WDR7Q9Y4E6 1490 aa23.28■■□□□ 1.32
POLR2A-203ENST00000574158 MAP3K4Q9Y6R4 1608 aa23.27■■□□□ 1.32
POLR2A-203ENST00000574158 FHOD3Q2V2M9 1422 aa23.26■■□□□ 1.31
POLR2A-203ENST00000574158 KDM6BO15054 1643 aa23.21■■□□□ 1.31
POLR2A-203ENST00000574158 ATP10BO94823 1461 aa23.19■■□□□ 1.3
POLR2A-203ENST00000574158 RANGAP1P46060 587 aaPredicted RBP23.18■■□□□ 1.3
POLR2A-203ENST00000574158 NUP153P49790 1475 aaKnown RBP23.17■■□□□ 1.3
POLR2A-203ENST00000574158 CFAP43Q8NDM7 1665 aa23.16■■□□□ 1.3
POLR2A-203ENST00000574158 EHMT2Q96KQ7 1210 aa23.15■■□□□ 1.3
POLR2A-203ENST00000574158 UBTFP17480 764 aaKnown RBP23.14■■□□□ 1.29
POLR2A-203ENST00000574158 ARHGAP35Q9NRY4 1499 aa23.13■■□□□ 1.29
POLR2A-203ENST00000574158 ARID3CA6NKF2 412 aa23.1■■□□□ 1.29
POLR2A-203ENST00000574158 TEX14Q8IWB6 1497 aa23.1■■□□□ 1.29
POLR2A-203ENST00000574158 ABCA9Q8IUA7 1624 aa23.07■■□□□ 1.28
POLR2A-203ENST00000574158 MAGI3Q5TCQ9 1506 aa23.06■■□□□ 1.28
POLR2A-203ENST00000574158 CD109Q6YHK3 1445 aa23.03■■□□□ 1.28
POLR2A-203ENST00000574158 HECW1Q76N89 1606 aa23.03■■□□□ 1.28
POLR2A-203ENST00000574158 FMN1Q68DA7 1419 aa23.02■■□□□ 1.28
POLR2A-203ENST00000574158 COL17A1Q9UMD9 1497 aaPredicted RBP23.01■■□□□ 1.27
POLR2A-203ENST00000574158 KCNH8Q96L42 1107 aa23.01■■□□□ 1.27
POLR2A-203ENST00000574158 CDK13Q14004 1512 aaKnown RBP23■■□□□ 1.27
POLR2A-203ENST00000574158 LRRIQ1Q96JM4 1722 aa22.96■■□□□ 1.27
POLR2A-203ENST00000574158 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.93■■□□□ 1.26
POLR2A-203ENST00000574158 HNRNPUL2Q1KMD3 747 aaKnown RBP22.93■■□□□ 1.26
POLR2A-203ENST00000574158 PCF11O94913 1555 aaKnown RBP22.93■■□□□ 1.26
POLR2A-203ENST00000574158 TTC37Q6PGP7 1564 aa22.9■■□□□ 1.26
POLR2A-203ENST00000574158 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.88■■□□□ 1.25
POLR2A-203ENST00000574158 CLIP1P30622 1438 aa22.88■■□□□ 1.25
POLR2A-203ENST00000574158 ARAP3Q8WWN8 1544 aa22.87■■□□□ 1.25
POLR2A-203ENST00000574158 PLEKHD1A6NEE1 506 aa22.86■■□□□ 1.25
POLR2A-203ENST00000574158 NEO1Q92859 1461 aa22.85■■□□□ 1.25
POLR2A-203ENST00000574158 CASKIN1Q8WXD9 1431 aa22.83■■□□□ 1.25
POLR2A-203ENST00000574158 FYCO1Q9BQS8 1478 aa22.81■■□□□ 1.24
POLR2A-203ENST00000574158 CFAP74Q9C0B2 1584 aa22.8■■□□□ 1.24
POLR2A-203ENST00000574158 PHLDB1Q86UU1 1377 aa22.8■■□□□ 1.24
POLR2A-203ENST00000574158 KIF14Q15058 1648 aa22.8■■□□□ 1.24
POLR2A-203ENST00000574158 FRMPD1Q5SYB0 1578 aa22.8■■□□□ 1.24
POLR2A-203ENST00000574158 CCDC18Q5T9S5 1454 aa22.79■■□□□ 1.24
POLR2A-203ENST00000574158 TROQ12816 1431 aaPredicted RBP22.77■■□□□ 1.24
POLR2A-203ENST00000574158 ATP1B4Q9UN42 357 aaPredicted RBP22.77■■□□□ 1.24
POLR2A-203ENST00000574158 MYO5CQ9NQX4 1742 aa22.77■■□□□ 1.23
POLR2A-203ENST00000574158 FANCAO15360 1455 aa22.74■■□□□ 1.23
POLR2A-203ENST00000574158 RICTORQ6R327 1708 aa22.74■■□□□ 1.23
POLR2A-203ENST00000574158 CEP162Q5TB80 1403 aa22.74■■□□□ 1.23
POLR2A-203ENST00000574158 AEBP2Q6ZN18 517 aaPredicted RBP22.71■■□□□ 1.23
POLR2A-203ENST00000574158 CDK11AQ9UQ88 783 aaPredicted RBP22.7■■□□□ 1.22
POLR2A-203ENST00000574158 ADGRL1O94910 1474 aa22.69■■□□□ 1.22
POLR2A-203ENST00000574158 PLCH2O75038 1416 aa22.69■■□□□ 1.22
POLR2A-203ENST00000574158 AKNAQ7Z591 1439 aa22.69■■□□□ 1.22
POLR2A-203ENST00000574158 KDM4FA0A1W2PPD8 638 aa22.69■■□□□ 1.22
POLR2A-203ENST00000574158 DENND4BO75064 1496 aaPredicted RBP22.66■■□□□ 1.22
POLR2A-203ENST00000574158 PREX2Q70Z35 1606 aa22.64■■□□□ 1.22
POLR2A-203ENST00000574158 ZMYM4Q5VZL5 1548 aa22.64■■□□□ 1.21
POLR2A-203ENST00000574158 ARHGEF40Q8TER5 1519 aa22.64■■□□□ 1.21
POLR2A-203ENST00000574158 RAPGEF3O95398 923 aa22.64■■□□□ 1.21
POLR2A-203ENST00000574158 CDC42BPBQ9Y5S2 1711 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 335.7 ms