RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 EHMT2Q96KQ7 1210 aa21.12■□□□□ 0.97
NPLOC4-214ENST00000573876 KIF21BO75037 1637 aa21.11■□□□□ 0.97
NPLOC4-214ENST00000573876 ARHGEF11O15085 1522 aa21.09■□□□□ 0.97
NPLOC4-214ENST00000573876 IQGAP2Q13576 1575 aa21.06■□□□□ 0.96
NPLOC4-214ENST00000573876 GOLGA3Q08378 1498 aa21.06■□□□□ 0.96
NPLOC4-214ENST00000573876 SHROOM2Q13796 1616 aa21.05■□□□□ 0.96
NPLOC4-214ENST00000573876 PRG4Q92954 1404 aaPredicted RBP21.04■□□□□ 0.96
NPLOC4-214ENST00000573876 RIMBP3CA6NJZ7 1639 aa21.04■□□□□ 0.96
NPLOC4-214ENST00000573876 RIMBP3BA6NNM3 1639 aa21.04■□□□□ 0.96
NPLOC4-214ENST00000573876 RIMBP3Q9UFD9 1639 aa21.04■□□□□ 0.96
NPLOC4-214ENST00000573876 UBTFP17480 764 aaKnown RBP21.04■□□□□ 0.96
NPLOC4-214ENST00000573876 CTTNBP2Q8WZ74 1663 aa21.03■□□□□ 0.96
NPLOC4-214ENST00000573876 LOC105371045A0A1W2PR82 267 aa20.99■□□□□ 0.95
NPLOC4-214ENST00000573876 CARMIL2Q6F5E8 1435 aa20.98■□□□□ 0.95
NPLOC4-214ENST00000573876 UGGT2Q9NYU1 1516 aa20.95■□□□□ 0.94
NPLOC4-214ENST00000573876 ERCC6L2Q5T890 1561 aa20.94■□□□□ 0.94
NPLOC4-214ENST00000573876 CYB5RLQ6IPT4 315 aa20.94■□□□□ 0.94
NPLOC4-214ENST00000573876 ARAP1Q96P48 1450 aa20.93■□□□□ 0.94
NPLOC4-214ENST00000573876 RANGAP1P46060 587 aaPredicted RBP20.89■□□□□ 0.93
NPLOC4-214ENST00000573876 DISP1Q96F81 1524 aa20.88■□□□□ 0.93
NPLOC4-214ENST00000573876 TNIKQ9UKE5 1360 aa20.87■□□□□ 0.93
NPLOC4-214ENST00000573876 TTBK1Q5TCY1 1321 aaPredicted RBP20.85■□□□□ 0.93
NPLOC4-214ENST00000573876 PTPRGP23470 1445 aa20.85■□□□□ 0.93
NPLOC4-214ENST00000573876 KIAA0556O60303 1618 aa20.84■□□□□ 0.93
NPLOC4-214ENST00000573876 P3H3Q8IVL6 736 aa20.81■□□□□ 0.92
NPLOC4-214ENST00000573876 EFCAB5A4FU69 1503 aa20.78■□□□□ 0.92
NPLOC4-214ENST00000573876 SAMD9Q5K651 1589 aa20.77■□□□□ 0.92
NPLOC4-214ENST00000573876 FHOD3Q2V2M9 1422 aa20.71■□□□□ 0.91
NPLOC4-214ENST00000573876 NPM1P06748 294 aaKnown RBP eCLIP20.7■□□□□ 0.9
NPLOC4-214ENST00000573876 CLIP1P30622 1438 aa20.7■□□□□ 0.9
NPLOC4-214ENST00000573876 UACAQ9BZF9 1416 aa20.7■□□□□ 0.9
NPLOC4-214ENST00000573876 ARHGAP35Q9NRY4 1499 aa20.69■□□□□ 0.9
NPLOC4-214ENST00000573876 UHRF1BP1LA0JNW5 1464 aa20.64■□□□□ 0.89
NPLOC4-214ENST00000573876 CEP162Q5TB80 1403 aa20.64■□□□□ 0.89
NPLOC4-214ENST00000573876 ABCC2Q92887 1545 aa20.63■□□□□ 0.89
NPLOC4-214ENST00000573876 PLB1Q6P1J6 1458 aa20.62■□□□□ 0.89
NPLOC4-214ENST00000573876 ADCY10Q96PN6 1610 aa20.62■□□□□ 0.89
NPLOC4-214ENST00000573876 FMN1Q68DA7 1419 aa20.61■□□□□ 0.89
NPLOC4-214ENST00000573876 ABCA8O94911 1581 aa20.59■□□□□ 0.89
NPLOC4-214ENST00000573876 RAPGEF6Q8TEU7 1601 aa20.55■□□□□ 0.88
NPLOC4-214ENST00000573876 ATP1B4Q9UN42 357 aaPredicted RBP20.54■□□□□ 0.88
NPLOC4-214ENST00000573876 KDM5BQ9UGL1 1544 aa20.53■□□□□ 0.88
NPLOC4-214ENST00000573876 ARID3CA6NKF2 412 aa20.5■□□□□ 0.87
NPLOC4-214ENST00000573876 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.5■□□□□ 0.87
NPLOC4-214ENST00000573876 HNRNPUL2Q1KMD3 747 aaKnown RBP20.5■□□□□ 0.87
NPLOC4-214ENST00000573876 MAPKBP1O60336 1514 aa20.48■□□□□ 0.87
NPLOC4-214ENST00000573876 ZCCHC11Q5TAX3 1644 aaKnown RBP20.47■□□□□ 0.87
NPLOC4-214ENST00000573876 TRHP20396 242 aaPredicted RBP20.47■□□□□ 0.87
NPLOC4-214ENST00000573876 NUP153P49790 1475 aaKnown RBP20.47■□□□□ 0.87
NPLOC4-214ENST00000573876 HECW1Q76N89 1606 aa20.45■□□□□ 0.87
NPLOC4-214ENST00000573876 CASKIN1Q8WXD9 1431 aa20.45■□□□□ 0.86
NPLOC4-214ENST00000573876 ATP10BO94823 1461 aa20.45■□□□□ 0.86
NPLOC4-214ENST00000573876 ASXL2Q76L83 1435 aa20.44■□□□□ 0.86
NPLOC4-214ENST00000573876 FYCO1Q9BQS8 1478 aa20.42■□□□□ 0.86
NPLOC4-214ENST00000573876 PCF11O94913 1555 aaKnown RBP20.41■□□□□ 0.86
NPLOC4-214ENST00000573876 PLEKHD1A6NEE1 506 aa20.39■□□□□ 0.85
NPLOC4-214ENST00000573876 CDK11AQ9UQ88 783 aaPredicted RBP20.39■□□□□ 0.85
NPLOC4-214ENST00000573876 EPRSP07814 1512 aaKnown RBP20.38■□□□□ 0.85
NPLOC4-214ENST00000573876 VPS8Q8N3P4 1428 aa20.38■□□□□ 0.85
NPLOC4-214ENST00000573876 WDR7Q9Y4E6 1490 aa20.37■□□□□ 0.85
NPLOC4-214ENST00000573876 FAM69CQ0P6D2 419 aa20.37■□□□□ 0.85
NPLOC4-214ENST00000573876 ABCC10Q5T3U5 1492 aa20.37■□□□□ 0.85
NPLOC4-214ENST00000573876 CDK13Q14004 1512 aaKnown RBP20.36■□□□□ 0.85
NPLOC4-214ENST00000573876 CCDC18Q5T9S5 1454 aa20.36■□□□□ 0.85
NPLOC4-214ENST00000573876 KCNH8Q96L42 1107 aa20.35■□□□□ 0.85
NPLOC4-214ENST00000573876 DIP2BQ9P265 1576 aa20.31■□□□□ 0.84
NPLOC4-214ENST00000573876 APLP2Q06481 763 aa20.27■□□□□ 0.84
NPLOC4-214ENST00000573876 GLI2P10070 1586 aa20.26■□□□□ 0.83
NPLOC4-214ENST00000573876 KIF13AQ9H1H9 1805 aa20.26■□□□□ 0.83
NPLOC4-214ENST00000573876 LRRIQ1Q96JM4 1722 aa20.26■□□□□ 0.83
NPLOC4-214ENST00000573876 TROQ12816 1431 aaPredicted RBP20.24■□□□□ 0.83
NPLOC4-214ENST00000573876 MTUS2Q5JR59 1369 aa20.21■□□□□ 0.83
NPLOC4-214ENST00000573876 CD109Q6YHK3 1445 aa20.19■□□□□ 0.82
NPLOC4-214ENST00000573876 TIAM1Q13009 1591 aa20.17■□□□□ 0.82
NPLOC4-214ENST00000573876 CFAP43Q8NDM7 1665 aa20.16■□□□□ 0.82
NPLOC4-214ENST00000573876 MAP3K1Q13233 1512 aa20.16■□□□□ 0.82
NPLOC4-214ENST00000573876 KIF14Q15058 1648 aa20.16■□□□□ 0.82
NPLOC4-214ENST00000573876 ABCA9Q8IUA7 1624 aa20.16■□□□□ 0.82
NPLOC4-214ENST00000573876 TSPOAP1O95153 1857 aa20.16■□□□□ 0.82
NPLOC4-214ENST00000573876 MAP3K4Q9Y6R4 1608 aa20.15■□□□□ 0.82
NPLOC4-214ENST00000573876 MAGI3Q5TCQ9 1506 aa20.13■□□□□ 0.81
NPLOC4-214ENST00000573876 EHBP1L1Q8N3D4 1523 aa20.13■□□□□ 0.81
NPLOC4-214ENST00000573876 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.12■□□□□ 0.81
NPLOC4-214ENST00000573876 TEX14Q8IWB6 1497 aa20.12■□□□□ 0.81
NPLOC4-214ENST00000573876 LRRC9Q6ZRR7 1453 aa20.09■□□□□ 0.81
NPLOC4-214ENST00000573876 TTC37Q6PGP7 1564 aa20.08■□□□□ 0.81
NPLOC4-214ENST00000573876 KANK4Q5T7N3 995 aaPredicted RBP20.07■□□□□ 0.8
NPLOC4-214ENST00000573876 PPARGC1BQ86YN6 1023 aaKnown RBP20.07■□□□□ 0.8
NPLOC4-214ENST00000573876 PLCH2O75038 1416 aa20.05■□□□□ 0.8
NPLOC4-214ENST00000573876 PPRC1Q5VV67 1664 aaKnown RBP20.05■□□□□ 0.8
NPLOC4-214ENST00000573876 CCNB3Q8WWL7 1395 aa20.05■□□□□ 0.8
NPLOC4-214ENST00000573876 SUPT6HQ7KZ85 1726 aaKnown RBP20.03■□□□□ 0.8
NPLOC4-214ENST00000573876 EFCAB2Q5VUJ9 269 aa20.03■□□□□ 0.8
NPLOC4-214ENST00000573876 PHLDB1Q86UU1 1377 aa20.03■□□□□ 0.8
NPLOC4-214ENST00000573876 MYO5CQ9NQX4 1742 aa20.02■□□□□ 0.8
NPLOC4-214ENST00000573876 NEO1Q92859 1461 aa20.01■□□□□ 0.79
NPLOC4-214ENST00000573876 FANCAO15360 1455 aa20■□□□□ 0.79
NPLOC4-214ENST00000573876 NCOA2Q15596 1464 aa20■□□□□ 0.79
NPLOC4-214ENST00000573876 ARAP3Q8WWN8 1544 aa20■□□□□ 0.79
NPLOC4-214ENST00000573876 ARHGAP5Q13017 1502 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms