RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 NISCHQ9Y2I1 1504 aa30.62■■■□□ 2.49
NPLOC4-214ENST00000573876 CCDC180Q9P1Z9 1646 aa27.08■■□□□ 1.93
NPLOC4-214ENST00000573876 ABCC9O60706 1549 aa26.3■■□□□ 1.8
NPLOC4-214ENST00000573876 DCAF8L2P0C7V8 631 aa25.6■■□□□ 1.69
NPLOC4-214ENST00000573876 ZCCHC6Q5VYS8 1495 aaKnown RBP25.54■■□□□ 1.68
NPLOC4-214ENST00000573876 NACADO15069 1562 aa25.44■■□□□ 1.66
NPLOC4-214ENST00000573876 RB1CC1Q8TDY2 1594 aa25.42■■□□□ 1.66
NPLOC4-214ENST00000573876 MYO15BQ96JP2 1530 aa25.36■■□□□ 1.65
NPLOC4-214ENST00000573876 DCAF1Q9Y4B6 1507 aa25.34■■□□□ 1.65
NPLOC4-214ENST00000573876 SCRIBQ14160 1630 aa24.75■■□□□ 1.55
NPLOC4-214ENST00000573876 UNC13AQ9UPW8 1703 aa24.75■■□□□ 1.55
NPLOC4-214ENST00000573876 PABPN1Q86U42 306 aaKnown RBP eCLIP24.65■■□□□ 1.54
NPLOC4-214ENST00000573876 BICRAQ9NZM4 1560 aa24.56■■□□□ 1.52
NPLOC4-214ENST00000573876 SHROOM4Q9ULL8 1493 aa24.4■■□□□ 1.5
NPLOC4-214ENST00000573876 EIF4G1Q04637 1599 aaKnown RBP23.94■■□□□ 1.42
NPLOC4-214ENST00000573876 DNAJC5BQ9UF47 199 aa23.88■■□□□ 1.41
NPLOC4-214ENST00000573876 CECR2Q9BXF3 1484 aa23.81■■□□□ 1.4
NPLOC4-214ENST00000573876 CC2D2AQ9P2K1 1620 aa23.77■■□□□ 1.4
NPLOC4-214ENST00000573876 BAZ1AQ9NRL2 1556 aaPredicted RBP23.74■■□□□ 1.39
NPLOC4-214ENST00000573876 SMARCA4P51532 1647 aa23.69■■□□□ 1.38
NPLOC4-214ENST00000573876 MROH2BQ7Z745 1585 aa23.58■■□□□ 1.37
NPLOC4-214ENST00000573876 SMARCA2P51531 1590 aa23.52■■□□□ 1.36
NPLOC4-214ENST00000573876 ATAD2BQ9ULI0 1458 aa23.51■■□□□ 1.35
NPLOC4-214ENST00000573876 NCAPD3P42695 1498 aa23.47■■□□□ 1.35
NPLOC4-214ENST00000573876 PEG3Q9GZU2 1588 aa23.44■■□□□ 1.34
NPLOC4-214ENST00000573876 RSF1Q96T23 1441 aaPredicted RBP23.42■■□□□ 1.34
NPLOC4-214ENST00000573876 HMGXB3Q12766 1538 aa23.37■■□□□ 1.33
NPLOC4-214ENST00000573876 BAZ1BQ9UIG0 1483 aaKnown RBP23.36■■□□□ 1.33
NPLOC4-214ENST00000573876 WIZO95785 1651 aa23.33■■□□□ 1.33
NPLOC4-214ENST00000573876 TOP2AP11388 1531 aaKnown RBP23.13■■□□□ 1.29
NPLOC4-214ENST00000573876 SUPT5HO00267 1087 aaKnown RBP23.13■■□□□ 1.29
NPLOC4-214ENST00000573876 CCDC88BA6NC98 1476 aa22.86■■□□□ 1.25
NPLOC4-214ENST00000573876 CADPSQ9ULU8 1353 aa22.83■■□□□ 1.25
NPLOC4-214ENST00000573876 LAMC3Q9Y6N6 1575 aa22.81■■□□□ 1.24
NPLOC4-214ENST00000573876 NESP48681 1621 aa22.8■■□□□ 1.24
NPLOC4-214ENST00000573876 PDS5BQ9NTI5 1447 aa22.71■■□□□ 1.23
NPLOC4-214ENST00000573876 CFTRP13569 1480 aa22.71■■□□□ 1.23
NPLOC4-214ENST00000573876 ERCC6Q03468 1493 aa22.71■■□□□ 1.23
NPLOC4-214ENST00000573876 FANCD2Q9BXW9 1451 aa22.55■■□□□ 1.2
NPLOC4-214ENST00000573876 KIF21AQ7Z4S6 1674 aa22.52■■□□□ 1.2
NPLOC4-214ENST00000573876 PRDM2Q13029 1718 aa22.52■■□□□ 1.2
NPLOC4-214ENST00000573876 CEP164Q9UPV0 1460 aa22.51■■□□□ 1.19
NPLOC4-214ENST00000573876 MRC2Q9UBG0 1479 aa22.41■■□□□ 1.18
NPLOC4-214ENST00000573876 THOC2Q8NI27 1593 aaKnown RBP22.38■■□□□ 1.17
NPLOC4-214ENST00000573876 CUX2O14529 1486 aa22.34■■□□□ 1.17
NPLOC4-214ENST00000573876 WDR62O43379 1518 aa22.3■■□□□ 1.16
NPLOC4-214ENST00000573876 URB2Q14146 1524 aaKnown RBP22.27■■□□□ 1.16
NPLOC4-214ENST00000573876 ABCC8Q09428 1581 aa22.27■■□□□ 1.16
NPLOC4-214ENST00000573876 TOPBP1Q92547 1522 aa22.21■■□□□ 1.15
NPLOC4-214ENST00000573876 DNMBPQ6XZF7 1577 aa22.21■■□□□ 1.15
NPLOC4-214ENST00000573876 WRNQ14191 1432 aaPredicted RBP eCLIP22.12■■□□□ 1.13
NPLOC4-214ENST00000573876 CUX1P39880 1505 aa22.11■■□□□ 1.13
NPLOC4-214ENST00000573876 POLA1P09884 1462 aaPredicted RBP22.03■■□□□ 1.12
NPLOC4-214ENST00000573876 IFT140Q96RY7 1462 aa22.03■■□□□ 1.12
NPLOC4-214ENST00000573876 FGD5Q6ZNL6 1462 aa22.03■■□□□ 1.12
NPLOC4-214ENST00000573876 TOP2BQ02880 1626 aa22■■□□□ 1.11
NPLOC4-214ENST00000573876 SOGA1O94964 1423 aa21.99■■□□□ 1.11
NPLOC4-214ENST00000573876 SYNJ1O43426 1573 aa21.99■■□□□ 1.11
NPLOC4-214ENST00000573876 BIVM-ERCC5R4GMW8 1640 aa21.98■■□□□ 1.11
NPLOC4-214ENST00000573876 RAD54L2Q9Y4B4 1467 aa21.94■■□□□ 1.1
NPLOC4-214ENST00000573876 TARBP1Q13395 1621 aaKnown RBP21.91■■□□□ 1.1
NPLOC4-214ENST00000573876 ZNF608Q9ULD9 1512 aaPredicted RBP21.86■■□□□ 1.09
NPLOC4-214ENST00000573876 TRIM41Q8WV44 630 aa21.83■■□□□ 1.09
NPLOC4-214ENST00000573876 ABCA10Q8WWZ4 1543 aa21.82■■□□□ 1.08
NPLOC4-214ENST00000573876 TDRD9Q8NDG6 1382 aaKnown RBP21.82■■□□□ 1.08
NPLOC4-214ENST00000573876 AQRO60306 1485 aaKnown RBP eCLIP21.8■■□□□ 1.082e-6■■□□□ 13.2
NPLOC4-214ENST00000573876 CHIC1Q5VXU3 224 aa21.8■■□□□ 1.08
NPLOC4-214ENST00000573876 WDR97A6NE52 1622 aa21.79■■□□□ 1.08
NPLOC4-214ENST00000573876 EIF4G3O43432 1585 aaKnown RBP21.78■■□□□ 1.08
NPLOC4-214ENST00000573876 GAPVD1Q14C86 1478 aa21.72■■□□□ 1.07
NPLOC4-214ENST00000573876 GRIN2BQ13224 1484 aa21.7■■□□□ 1.06
NPLOC4-214ENST00000573876 ABCA5Q8WWZ7 1642 aa21.67■■□□□ 1.06
NPLOC4-214ENST00000573876 KIF27Q86VH2 1401 aa21.66■■□□□ 1.06
NPLOC4-214ENST00000573876 PBRM1Q86U86 1689 aa21.61■■□□□ 1.05
NPLOC4-214ENST00000573876 SNAPC4Q5SXM2 1469 aa21.61■■□□□ 1.05
NPLOC4-214ENST00000573876 MAGI1Q96QZ7 1491 aaPredicted RBP21.6■■□□□ 1.05
NPLOC4-214ENST00000573876 FBLN2P98095 1184 aa21.58■■□□□ 1.05
NPLOC4-214ENST00000573876 ERICH3Q5RHP9 1530 aa21.57■■□□□ 1.04
NPLOC4-214ENST00000573876 CHMP7Q8WUX9 453 aaPredicted RBP21.56■■□□□ 1.04
NPLOC4-214ENST00000573876 SYNJ2O15056 1496 aa21.52■■□□□ 1.03
NPLOC4-214ENST00000573876 OSCARQ8IYS5 282 aa21.51■■□□□ 1.03
NPLOC4-214ENST00000573876 IGF1RP08069 1367 aa21.5■■□□□ 1.03
NPLOC4-214ENST00000573876 FHAD1B1AJZ9 1412 aa21.5■■□□□ 1.03
NPLOC4-214ENST00000573876 ADAMTS12P58397 1594 aa21.47■■□□□ 1.03
NPLOC4-214ENST00000573876 RUSC2Q8N2Y8 1516 aa21.46■■□□□ 1.03
NPLOC4-214ENST00000573876 CHD1O14646 1710 aa21.46■■□□□ 1.03
NPLOC4-214ENST00000573876 CUL7Q14999 1698 aa21.42■■□□□ 1.02
NPLOC4-214ENST00000573876 EEA1Q15075 1411 aa21.42■■□□□ 1.02
NPLOC4-214ENST00000573876 CARMIL1Q5VZK9 1371 aa21.41■■□□□ 1.02
NPLOC4-214ENST00000573876 GRIN2AQ12879 1464 aa21.39■■□□□ 1.02
NPLOC4-214ENST00000573876 FAM9AQ8IZU1 332 aaPredicted RBP21.39■■□□□ 1.01
NPLOC4-214ENST00000573876 CSRNP3Q8WYN3 585 aa21.37■■□□□ 1.01
NPLOC4-214ENST00000573876 DNAJC5Q9H3Z4 198 aa21.37■■□□□ 1.01
NPLOC4-214ENST00000573876 RAPGEF2Q9Y4G8 1499 aa21.3■■□□□ 1
NPLOC4-214ENST00000573876 NUP160Q12769 1436 aa21.28■■□□□ 1
NPLOC4-214ENST00000573876 PRXQ9BXM0 1461 aa21.26■□□□□ 0.99
NPLOC4-214ENST00000573876 CEP170Q5SW79 1584 aa21.24■□□□□ 0.99
NPLOC4-214ENST00000573876 CLASP1Q7Z460 1538 aa21.23■□□□□ 0.99
NPLOC4-214ENST00000573876 KIAA0586Q9BVV6 1533 aa21.16■□□□□ 0.98
NPLOC4-214ENST00000573876 JPH4Q96JJ6 628 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms