RNA–Protein interactions for RNA: ENST00000573872.5

TRAP1-208, Transcript of TNF receptor associated protein 1, humanhuman

TSL 3

Gene TRAP1, Length 656 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-208ENST00000573872 RIMBP3BA6NNM3 1639 aa21.95■■□□□ 1.1
TRAP1-208ENST00000573872 SHROOM2Q13796 1616 aa21.95■■□□□ 1.1
TRAP1-208ENST00000573872 RIMBP3Q9UFD9 1639 aa21.95■■□□□ 1.1
TRAP1-208ENST00000573872 FAM9AQ8IZU1 332 aaPredicted RBP21.92■■□□□ 1.1
TRAP1-208ENST00000573872 JPH4Q96JJ6 628 aa21.86■■□□□ 1.09
TRAP1-208ENST00000573872 KIF21BO75037 1637 aa21.86■■□□□ 1.09
TRAP1-208ENST00000573872 IQGAP2Q13576 1575 aa21.84■■□□□ 1.09
TRAP1-208ENST00000573872 ERCC6L2Q5T890 1561 aa21.84■■□□□ 1.09
TRAP1-208ENST00000573872 ARAP1Q96P48 1450 aa21.82■■□□□ 1.08
TRAP1-208ENST00000573872 CTTNBP2Q8WZ74 1663 aa21.82■■□□□ 1.08
TRAP1-208ENST00000573872 PRG4Q92954 1404 aaPredicted RBP21.8■■□□□ 1.08
TRAP1-208ENST00000573872 UGGT2Q9NYU1 1516 aa21.75■■□□□ 1.07
TRAP1-208ENST00000573872 GOLGA3Q08378 1498 aa21.72■■□□□ 1.07
TRAP1-208ENST00000573872 DISP1Q96F81 1524 aa21.7■■□□□ 1.07
TRAP1-208ENST00000573872 CYB5RLQ6IPT4 315 aa21.7■■□□□ 1.06
TRAP1-208ENST00000573872 CARMIL2Q6F5E8 1435 aa21.66■■□□□ 1.06
TRAP1-208ENST00000573872 KIAA0556O60303 1618 aa21.65■■□□□ 1.06
TRAP1-208ENST00000573872 TNIKQ9UKE5 1360 aa21.61■■□□□ 1.05
TRAP1-208ENST00000573872 EHMT2Q96KQ7 1210 aa21.59■■□□□ 1.05
TRAP1-208ENST00000573872 SAMD9Q5K651 1589 aa21.58■■□□□ 1.05
TRAP1-208ENST00000573872 UBTFP17480 764 aaKnown RBP21.58■■□□□ 1.05
TRAP1-208ENST00000573872 PTPRGP23470 1445 aa21.56■■□□□ 1.04
TRAP1-208ENST00000573872 EFCAB5A4FU69 1503 aa21.5■■□□□ 1.03
TRAP1-208ENST00000573872 ADCY10Q96PN6 1610 aa21.48■■□□□ 1.03
TRAP1-208ENST00000573872 UHRF1BP1LA0JNW5 1464 aa21.45■■□□□ 1.02
TRAP1-208ENST00000573872 RANGAP1P46060 587 aaPredicted RBP21.44■■□□□ 1.02
TRAP1-208ENST00000573872 P3H3Q8IVL6 736 aa21.44■■□□□ 1.02
TRAP1-208ENST00000573872 TTBK1Q5TCY1 1321 aaPredicted RBP21.44■■□□□ 1.02
TRAP1-208ENST00000573872 UACAQ9BZF9 1416 aa21.44■■□□□ 1.02
TRAP1-208ENST00000573872 ARHGAP35Q9NRY4 1499 aa21.43■■□□□ 1.02
TRAP1-208ENST00000573872 FHOD3Q2V2M9 1422 aa21.42■■□□□ 1.02
TRAP1-208ENST00000573872 ABCA8O94911 1581 aa21.41■■□□□ 1.02
TRAP1-208ENST00000573872 ABCC2Q92887 1545 aa21.41■■□□□ 1.02
TRAP1-208ENST00000573872 PLB1Q6P1J6 1458 aa21.4■■□□□ 1.02
TRAP1-208ENST00000573872 LOC105371045A0A1W2PR82 267 aa21.38■■□□□ 1.01
TRAP1-208ENST00000573872 KDM5BQ9UGL1 1544 aa21.34■■□□□ 1.01
TRAP1-208ENST00000573872 CLIP1P30622 1438 aa21.32■■□□□ 1
TRAP1-208ENST00000573872 MAPKBP1O60336 1514 aa21.32■■□□□ 1
TRAP1-208ENST00000573872 RAPGEF6Q8TEU7 1601 aa21.3■■□□□ 1
TRAP1-208ENST00000573872 NPM1P06748 294 aaKnown RBP eCLIP21.29■■□□□ 1
TRAP1-208ENST00000573872 CEP162Q5TB80 1403 aa21.29■■□□□ 1
TRAP1-208ENST00000573872 FMN1Q68DA7 1419 aa21.28■■□□□ 1
TRAP1-208ENST00000573872 ZCCHC11Q5TAX3 1644 aaKnown RBP21.27■■□□□ 1
TRAP1-208ENST00000573872 NUP153P49790 1475 aaKnown RBP21.25■□□□□ 0.99
TRAP1-208ENST00000573872 ATP10BO94823 1461 aa21.22■□□□□ 0.99
TRAP1-208ENST00000573872 ASXL2Q76L83 1435 aa21.21■□□□□ 0.99
TRAP1-208ENST00000573872 ABCC10Q5T3U5 1492 aa21.19■□□□□ 0.98
TRAP1-208ENST00000573872 DIP2BQ9P265 1576 aa21.16■□□□□ 0.98
TRAP1-208ENST00000573872 KIF13AQ9H1H9 1805 aa21.15■□□□□ 0.98
TRAP1-208ENST00000573872 HECW1Q76N89 1606 aa21.15■□□□□ 0.98
TRAP1-208ENST00000573872 CASKIN1Q8WXD9 1431 aa21.15■□□□□ 0.98
TRAP1-208ENST00000573872 TRHP20396 242 aaPredicted RBP21.15■□□□□ 0.98
TRAP1-208ENST00000573872 PCF11O94913 1555 aaKnown RBP21.14■□□□□ 0.98
TRAP1-208ENST00000573872 WDR7Q9Y4E6 1490 aa21.13■□□□□ 0.97
TRAP1-208ENST00000573872 ARID3CA6NKF2 412 aa21.13■□□□□ 0.97
TRAP1-208ENST00000573872 EPRSP07814 1512 aaKnown RBP21.11■□□□□ 0.97
TRAP1-208ENST00000573872 FYCO1Q9BQS8 1478 aa21.11■□□□□ 0.97
TRAP1-208ENST00000573872 CDK13Q14004 1512 aaKnown RBP21.1■□□□□ 0.97
TRAP1-208ENST00000573872 LRRIQ1Q96JM4 1722 aa21.09■□□□□ 0.97
TRAP1-208ENST00000573872 GLI2P10070 1586 aa21.09■□□□□ 0.97
TRAP1-208ENST00000573872 FAM69CQ0P6D2 419 aa21.07■□□□□ 0.96
TRAP1-208ENST00000573872 VPS8Q8N3P4 1428 aa21.04■□□□□ 0.96
TRAP1-208ENST00000573872 CCDC18Q5T9S5 1454 aa21.03■□□□□ 0.96
TRAP1-208ENST00000573872 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.03■□□□□ 0.96
TRAP1-208ENST00000573872 HNRNPUL2Q1KMD3 747 aaKnown RBP21.03■□□□□ 0.96
TRAP1-208ENST00000573872 ATP1B4Q9UN42 357 aaPredicted RBP21.03■□□□□ 0.96
TRAP1-208ENST00000573872 PLEKHD1A6NEE1 506 aa21■□□□□ 0.95
TRAP1-208ENST00000573872 MAP3K4Q9Y6R4 1608 aa21■□□□□ 0.95
TRAP1-208ENST00000573872 KCNH8Q96L42 1107 aa20.98■□□□□ 0.95
TRAP1-208ENST00000573872 ABCA9Q8IUA7 1624 aa20.95■□□□□ 0.94
TRAP1-208ENST00000573872 PPRC1Q5VV67 1664 aaKnown RBP20.95■□□□□ 0.94
TRAP1-208ENST00000573872 CFAP43Q8NDM7 1665 aa20.95■□□□□ 0.94
TRAP1-208ENST00000573872 MAGI3Q5TCQ9 1506 aa20.94■□□□□ 0.94
TRAP1-208ENST00000573872 CDK11AQ9UQ88 783 aaPredicted RBP20.94■□□□□ 0.94
TRAP1-208ENST00000573872 TROQ12816 1431 aaPredicted RBP20.94■□□□□ 0.94
TRAP1-208ENST00000573872 TSPOAP1O95153 1857 aa20.92■□□□□ 0.94
TRAP1-208ENST00000573872 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.9■□□□□ 0.94
TRAP1-208ENST00000573872 CD109Q6YHK3 1445 aa20.9■□□□□ 0.94
TRAP1-208ENST00000573872 KIF14Q15058 1648 aa20.87■□□□□ 0.93
TRAP1-208ENST00000573872 TTC37Q6PGP7 1564 aa20.87■□□□□ 0.93
TRAP1-208ENST00000573872 TIAM1Q13009 1591 aa20.86■□□□□ 0.93
TRAP1-208ENST00000573872 MAP3K1Q13233 1512 aa20.85■□□□□ 0.93
TRAP1-208ENST00000573872 TEX14Q8IWB6 1497 aa20.84■□□□□ 0.93
TRAP1-208ENST00000573872 EHBP1L1Q8N3D4 1523 aa20.81■□□□□ 0.92
TRAP1-208ENST00000573872 MTUS2Q5JR59 1369 aa20.8■□□□□ 0.92
TRAP1-208ENST00000573872 AEBP2Q6ZN18 517 aaPredicted RBP20.79■□□□□ 0.92
TRAP1-208ENST00000573872 PLCH2O75038 1416 aa20.78■□□□□ 0.92
TRAP1-208ENST00000573872 ARAP3Q8WWN8 1544 aa20.77■□□□□ 0.92
TRAP1-208ENST00000573872 LRRC9Q6ZRR7 1453 aa20.76■□□□□ 0.91
TRAP1-208ENST00000573872 MYO5CQ9NQX4 1742 aa20.75■□□□□ 0.91
TRAP1-208ENST00000573872 NEO1Q92859 1461 aa20.75■□□□□ 0.91
TRAP1-208ENST00000573872 COL17A1Q9UMD9 1497 aaPredicted RBP20.74■□□□□ 0.91
TRAP1-208ENST00000573872 KANK4Q5T7N3 995 aaPredicted RBP20.73■□□□□ 0.91
TRAP1-208ENST00000573872 KDM6BO15054 1643 aa20.73■□□□□ 0.91
TRAP1-208ENST00000573872 PHLDB1Q86UU1 1377 aa20.72■□□□□ 0.91
TRAP1-208ENST00000573872 FANCAO15360 1455 aa20.72■□□□□ 0.91
TRAP1-208ENST00000573872 PREX2Q70Z35 1606 aa20.71■□□□□ 0.91
TRAP1-208ENST00000573872 CDC42BPAQ5VT25 1732 aa20.71■□□□□ 0.91
TRAP1-208ENST00000573872 CDC42BPBQ9Y5S2 1711 aa20.71■□□□□ 0.91
TRAP1-208ENST00000573872 GPATCH8Q9UKJ3 1502 aaKnown RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms