RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 TARBP1Q13395 1621 aaKnown RBP24.49■■□□□ 1.51
POLR2A-201ENST00000572844 GAPVD1Q14C86 1478 aa24.48■■□□□ 1.51
POLR2A-201ENST00000572844 CFAP43Q8NDM7 1665 aa24.47■■□□□ 1.51
POLR2A-201ENST00000572844 AQRO60306 1485 aaKnown RBP eCLIP24.43■■□□□ 1.52e-7■■■■■ 35.5
POLR2A-201ENST00000572844 PCF11O94913 1555 aaKnown RBP24.41■■□□□ 1.5
POLR2A-201ENST00000572844 TDRD9Q8NDG6 1382 aaKnown RBP24.4■■□□□ 1.5
POLR2A-201ENST00000572844 LRRC9Q6ZRR7 1453 aa24.38■■□□□ 1.49
POLR2A-201ENST00000572844 FYCO1Q9BQS8 1478 aa24.38■■□□□ 1.49
POLR2A-201ENST00000572844 MRC2Q9UBG0 1479 aa24.38■■□□□ 1.49
POLR2A-201ENST00000572844 CCNB3Q8WWL7 1395 aa24.37■■□□□ 1.49
POLR2A-201ENST00000572844 PBRM1Q86U86 1689 aa24.36■■□□□ 1.49
POLR2A-201ENST00000572844 SAMD9Q5K651 1589 aa24.36■■□□□ 1.49
POLR2A-201ENST00000572844 CASKIN1Q8WXD9 1431 aa24.35■■□□□ 1.49
POLR2A-201ENST00000572844 CLSPNQ9HAW4 1339 aa24.33■■□□□ 1.49
POLR2A-201ENST00000572844 FHOD3Q2V2M9 1422 aa24.32■■□□□ 1.48
POLR2A-201ENST00000572844 FMN1Q68DA7 1419 aa24.31■■□□□ 1.48
POLR2A-201ENST00000572844 WDR62O43379 1518 aa24.25■■□□□ 1.47
POLR2A-201ENST00000572844 SNAPC4Q5SXM2 1469 aa24.23■■□□□ 1.47
POLR2A-201ENST00000572844 ADAMTS12P58397 1594 aa24.23■■□□□ 1.47
POLR2A-201ENST00000572844 P3H3Q8IVL6 736 aa24.23■■□□□ 1.47
POLR2A-201ENST00000572844 DHX57Q6P158 1386 aaKnown RBP24.22■■□□□ 1.47
POLR2A-201ENST00000572844 IFT140Q96RY7 1462 aa24.21■■□□□ 1.47
POLR2A-201ENST00000572844 THOC2Q8NI27 1593 aaKnown RBP24.21■■□□□ 1.47
POLR2A-201ENST00000572844 GRIN2BQ13224 1484 aa24.18■■□□□ 1.46
POLR2A-201ENST00000572844 PHLDB1Q86UU1 1377 aa24.18■■□□□ 1.46
POLR2A-201ENST00000572844 ZNF316A6NFI3 1004 aaPredicted RBP24.15■■□□□ 1.46
POLR2A-201ENST00000572844 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.15■■□□□ 1.463e-8■□□□□ 9.1
POLR2A-201ENST00000572844 LRRIQ1Q96JM4 1722 aa24.13■■□□□ 1.45
POLR2A-201ENST00000572844 IQGAP2Q13576 1575 aa24.11■■□□□ 1.45
POLR2A-201ENST00000572844 DIEXFQ68CQ4 756 aaKnown RBP24.11■■□□□ 1.45
POLR2A-201ENST00000572844 ATP1B4Q9UN42 357 aaPredicted RBP24.06■■□□□ 1.44
POLR2A-201ENST00000572844 SETD5Q9C0A6 1442 aa24.03■■□□□ 1.44
POLR2A-201ENST00000572844 ZNF608Q9ULD9 1512 aaPredicted RBP24.03■■□□□ 1.44
POLR2A-201ENST00000572844 UGGT2Q9NYU1 1516 aa24.02■■□□□ 1.44
POLR2A-201ENST00000572844 RAB3GAP2Q9H2M9 1393 aa24.02■■□□□ 1.44
POLR2A-201ENST00000572844 CCDC18Q5T9S5 1454 aa24.01■■□□□ 1.43
POLR2A-201ENST00000572844 EHBP1L1Q8N3D4 1523 aa24.01■■□□□ 1.43
POLR2A-201ENST00000572844 SUPT6HQ7KZ85 1726 aaKnown RBP24■■□□□ 1.43
POLR2A-201ENST00000572844 HECW1Q76N89 1606 aa24■■□□□ 1.43
POLR2A-201ENST00000572844 EIF4G3O43432 1585 aaKnown RBP24■■□□□ 1.43
POLR2A-201ENST00000572844 MTUS2Q5JR59 1369 aa23.99■■□□□ 1.43
POLR2A-201ENST00000572844 FGD6Q6ZV73 1430 aa23.98■■□□□ 1.43
POLR2A-201ENST00000572844 ERCC6Q03468 1493 aa23.97■■□□□ 1.43
POLR2A-201ENST00000572844 ITGAEP38570 1179 aa23.97■■□□□ 1.43
POLR2A-201ENST00000572844 KIAA0586Q9BVV6 1533 aa23.94■■□□□ 1.42
POLR2A-201ENST00000572844 FAM50AQ14320 339 aaKnown RBP23.94■■□□□ 1.42
POLR2A-201ENST00000572844 ARHGEF11O15085 1522 aa23.93■■□□□ 1.42
POLR2A-201ENST00000572844 NCOA2Q15596 1464 aa23.92■■□□□ 1.42
POLR2A-201ENST00000572844 MAPKBP1O60336 1514 aa23.91■■□□□ 1.42
POLR2A-201ENST00000572844 MAGI1Q96QZ7 1491 aaPredicted RBP23.91■■□□□ 1.42
POLR2A-201ENST00000572844 GRIN2AQ12879 1464 aa23.9■■□□□ 1.42
POLR2A-201ENST00000572844 MYOM3Q5VTT5 1437 aa23.9■■□□□ 1.42
POLR2A-201ENST00000572844 KIAA0556O60303 1618 aa23.87■■□□□ 1.41
POLR2A-201ENST00000572844 EPRSP07814 1512 aaKnown RBP23.86■■□□□ 1.41
POLR2A-201ENST00000572844 MAGI3Q5TCQ9 1506 aa23.86■■□□□ 1.41
POLR2A-201ENST00000572844 DISP1Q96F81 1524 aa23.83■■□□□ 1.4
POLR2A-201ENST00000572844 PTPN23Q9H3S7 1636 aa23.82■■□□□ 1.4
POLR2A-201ENST00000572844 SYNJ2O15056 1496 aa23.8■■□□□ 1.4
POLR2A-201ENST00000572844 TCOF1Q13428 1488 aaKnown RBP23.8■■□□□ 1.4
POLR2A-201ENST00000572844 HFM1A2PYH4 1435 aa23.78■■□□□ 1.4
POLR2A-201ENST00000572844 CEP170Q5SW79 1584 aa23.74■■□□□ 1.39
POLR2A-201ENST00000572844 RAPGEF6Q8TEU7 1601 aa23.74■■□□□ 1.39
POLR2A-201ENST00000572844 CDK13Q14004 1512 aaKnown RBP23.73■■□□□ 1.39
POLR2A-201ENST00000572844 PTPRKQ15262 1439 aa23.73■■□□□ 1.39
POLR2A-201ENST00000572844 MIA2Q96PC5 1412 aa23.73■■□□□ 1.39
POLR2A-201ENST00000572844 TIMELESSQ9UNS1 1208 aa23.72■■□□□ 1.39
POLR2A-201ENST00000572844 NUP160Q12769 1436 aa23.7■■□□□ 1.38
POLR2A-201ENST00000572844 GCC2Q8IWJ2 1684 aa23.67■■□□□ 1.38
POLR2A-201ENST00000572844 NAIPQ13075 1403 aa23.67■■□□□ 1.38
POLR2A-201ENST00000572844 AKNAQ7Z591 1439 aa23.67■■□□□ 1.38
POLR2A-201ENST00000572844 NUP153P49790 1475 aaKnown RBP23.67■■□□□ 1.38
POLR2A-201ENST00000572844 CHMP7Q8WUX9 453 aaPredicted RBP23.66■■□□□ 1.38
POLR2A-201ENST00000572844 UACAQ9BZF9 1416 aa23.66■■□□□ 1.38
POLR2A-201ENST00000572844 CENPBP07199 599 aaPredicted RBP23.64■■□□□ 1.37
POLR2A-201ENST00000572844 ACIN1Q9UKV3 1341 aaKnown RBP23.63■■□□□ 1.37
POLR2A-201ENST00000572844 MIER1Q8N108 512 aa23.6■■□□□ 1.37
POLR2A-201ENST00000572844 CARMIL2Q6F5E8 1435 aa23.59■■□□□ 1.37
POLR2A-201ENST00000572844 CDK11AQ9UQ88 783 aaPredicted RBP23.56■■□□□ 1.36
POLR2A-201ENST00000572844 ADCY10Q96PN6 1610 aa23.55■■□□□ 1.36
POLR2A-201ENST00000572844 SCAF1Q9H7N4 1312 aaKnown RBP23.54■■□□□ 1.36
POLR2A-201ENST00000572844 SIN3AQ96ST3 1273 aa23.54■■□□□ 1.36
POLR2A-201ENST00000572844 NEUROD1Q13562 356 aa23.52■■□□□ 1.36
POLR2A-201ENST00000572844 DNMT1P26358 1616 aaKnown RBP23.52■■□□□ 1.36
POLR2A-201ENST00000572844 TROQ12816 1431 aaPredicted RBP23.51■■□□□ 1.35
POLR2A-201ENST00000572844 ITSN2Q9NZM3 1697 aa23.51■■□□□ 1.35
POLR2A-201ENST00000572844 JPH4Q96JJ6 628 aa23.51■■□□□ 1.35
POLR2A-201ENST00000572844 ROCK1Q13464 1354 aa23.48■■□□□ 1.35
POLR2A-201ENST00000572844 ABCA8O94911 1581 aa23.48■■□□□ 1.35
POLR2A-201ENST00000572844 PLB1Q6P1J6 1458 aa23.48■■□□□ 1.35
POLR2A-201ENST00000572844 FBLN2P98095 1184 aa23.47■■□□□ 1.35
POLR2A-201ENST00000572844 PPP1R15AO75807 674 aaPredicted RBP23.45■■□□□ 1.35
POLR2A-201ENST00000572844 DAPK1P53355 1430 aa23.45■■□□□ 1.35
POLR2A-201ENST00000572844 ARID3CA6NKF2 412 aa23.44■■□□□ 1.34
POLR2A-201ENST00000572844 KDM6BO15054 1643 aa23.41■■□□□ 1.34
POLR2A-201ENST00000572844 ABCC5O15440 1437 aa23.41■■□□□ 1.34
POLR2A-201ENST00000572844 PRG4Q92954 1404 aaPredicted RBP23.41■■□□□ 1.34
POLR2A-201ENST00000572844 RRP7BPQ9NSQ0 103 aa23.4■■□□□ 1.34
POLR2A-201ENST00000572844 TONSLQ96HA7 1378 aa23.39■■□□□ 1.34
POLR2A-201ENST00000572844 KIF14Q15058 1648 aa23.38■■□□□ 1.33
POLR2A-201ENST00000572844 CHD1O14646 1710 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms